>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence
          Length = 208083

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 106    atgcccagtaaaacattcttg 126
              |||||||||||||||||||||
Sbjct: 131518 atgcccagtaaaacattcttg 131498

>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete
             sequence
          Length = 168712

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   ttttaagacagcgagtagaaa 154
             |||||||||||||||||||||
Sbjct: 32349 ttttaagacagcgagtagaaa 32369

>gb|AY225417.2| Mus musculus peptide N-glycanase (Ngly1) gene, complete cds
          Length = 70991

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   taaaacattcttggagctatt 134
             |||||||||||||||||||||
Sbjct: 12287 taaaacattcttggagctatt 12307

>gb|AC126366.2| Homo sapiens chromosome 8, clone RP11-313A10, complete sequence
          Length = 170849

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   aaaatgaggtgaaagaaactg 201
             |||||||||||||||||||||
Sbjct: 90257 aaaatgaggtgaaagaaactg 90237

>gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosome 14, complete sequence
          Length = 216037

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    taaaacattcttggagctatt 134
              |||||||||||||||||||||
Sbjct: 166268 taaaacattcttggagctatt 166288

>gb|AF267169.4| Homo sapiens chromosome 8 clone RP11-317L5 map 8q24.2, complete
             sequence
          Length = 202815

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   aaaatgaggtgaaagaaactg 201
             |||||||||||||||||||||
Sbjct: 78442 aaaatgaggtgaaagaaactg 78422

>gb|AC161264.2| Mus musculus BAC clone RP23-275J22 from chromosome 9, complete sequence
          Length = 131422

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    atgcccagtaaaacattctt 125
              ||||||||||||||||||||
Sbjct: 128185 atgcccagtaaaacattctt 128204

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     ttttataatcacttgtaatc 66
              ||||||||||||||||||||
Sbjct: 239797 ttttataatcacttgtaatc 239816

>ref|XM_762825.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_69_30369_31253) partial mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 catctattgatgtcttcagc 291
           ||||||||||||||||||||
Sbjct: 415 catctattgatgtcttcagc 396

>gb|AC162717.3| Equus caballus clone CH241-248O22, complete sequence
          Length = 56228

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  caaaaatgaggtgaaagaaa 198
            ||||||||||||||||||||
Sbjct: 8403 caaaaatgaggtgaaagaaa 8384

>emb|AJ293319.1|RTY293319 Rickettsia typhi dapD gene, pbpC gene, rp196 gene, rp197 gene, rp198
            gene, adx1 gene and hscA gene (partial)
          Length = 9786

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   ttttataatcacttgtaatc 66
            ||||||||||||||||||||
Sbjct: 6992 ttttataatcacttgtaatc 7011

>gb|AC102055.13| Mus musculus chromosome 18, clone RP23-52J5, complete sequence
          Length = 220747

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atagtcacaactgcagttaa 106
             ||||||||||||||||||||
Sbjct: 98354 atagtcacaactgcagttaa 98373

>gb|AC154289.1| Mus musculus BAC clone RP23-449E11 from chromosome 16, complete sequence
          Length = 191617

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    ggcaaaaatgaggtgaaaga 196
              ||||||||||||||||||||
Sbjct: 101871 ggcaaaaatgaggtgaaaga 101890

>gb|AC153071.3| Equus caballus clone CH241-77F8, complete sequence
          Length = 245146

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    caaaaatgaggtgaaagaaa 198
              ||||||||||||||||||||
Sbjct: 244793 caaaaatgaggtgaaagaaa 244774

>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    caaaaatgaggtgaaagaaa 198
              ||||||||||||||||||||
Sbjct: 244793 caaaaatgaggtgaaagaaa 244774


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,640,738
Number of Sequences: 3902068
Number of extensions: 2640738
Number of successful extensions: 45606
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45578
Number of HSP's gapped (non-prelim): 28
length of query: 305
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 283
effective length of database: 17,147,199,772
effective search space: 4852657535476
effective search space used: 4852657535476
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)