>emb|AL671971.8| Mouse DNA sequence from clone RP23-32J15 on chromosome 11 Contains the
             Foxi1 gene for forkhead box I1 and the 3' end of the Dock2
             gene for dedicator of cyto-kinesis 2, complete sequence
          Length = 203257

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 228   agcagaaatactgggtggaggtgatg 253
             |||||||| |||||||||||||||||
Sbjct: 97182 agcagaaacactgggtggaggtgatg 97207

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 73       gatgtacatggctactcacatactgc 98
                |||||||| |||||||||||||||||
Sbjct: 26447142 gatgtacagggctactcacatactgc 26447167

>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0032K15
          Length = 126195

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 73     gatgtacatggctactcacatactgc 98
              |||||||| |||||||||||||||||
Sbjct: 121007 gatgtacagggctactcacatactgc 121032

>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0006H05
          Length = 154821

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 73    gatgtacatggctactcacatactgc 98
             |||||||| |||||||||||||||||
Sbjct: 55761 gatgtacagggctactcacatactgc 55786

>dbj|AK111686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170K17, full
            insert sequence
          Length = 4534

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 73   gatgtacatggctactcacatactgc 98
            |||||||| |||||||||||||||||
Sbjct: 4434 gatgtacagggctactcacatactgc 4409

>emb|BX649220.6| Chicken DNA sequence from clone WAG-14F8, complete sequence
          Length = 87646

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 215  aaagattttatacagcagaaa 235
            |||||||||||||||||||||
Sbjct: 7572 aaagattttatacagcagaaa 7552

>gb|AC102232.12| Mus musculus chromosome 18, clone RP24-76F12, complete sequence
          Length = 232199

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   tacatataacaaatatctatacca 140
             ||||||||||| ||||||||||||
Sbjct: 66999 tacatataacatatatctatacca 67022

>gb|AY250997.1| Psychrophilic marine bacterium DY3 CelX gene, complete cds
          Length = 1479

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 212 ctgaaagattttatacagcagaaa 235
           |||||| |||||||||||||||||
Sbjct: 200 ctgaaaaattttatacagcagaaa 223

>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence
          Length = 206967

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     aaaaaagcatgagctacagagttc 52
              |||||||| |||||||||||||||
Sbjct: 165127 aaaaaagcctgagctacagagttc 165104

>ref|XM_806154.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053507019.10) partial mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  caaaaaagcatgagctacag 47
           ||||||||||||||||||||
Sbjct: 379 caaaaaagcatgagctacag 398

>gb|AC107770.10| Mus musculus chromosome 5, clone RP23-114M24, complete sequence
          Length = 191762

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    gtttatcctgtgtctctggc 294
              ||||||||||||||||||||
Sbjct: 158749 gtttatcctgtgtctctggc 158768

>gb|AC127237.3| Mus musculus BAC clone RP24-363G13 from chromosome 3, complete sequence
          Length = 136362

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     acaaaacagcatcacatgac 21
             ||||||||||||||||||||
Sbjct: 94721 acaaaacagcatcacatgac 94740

>emb|Y17552.1|AHY17552 Alteromonas haloplanctis celG gene
          Length = 1590

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 212 ctgaaagattttatacagcagaaa 235
           |||||| |||||||||||||||||
Sbjct: 223 ctgaaaaattttatacagcagaaa 246

>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 14,
             complete sequence
          Length = 161300

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    acgagaacagcagatgtacatggc 84
             ||||||||||||| ||||||||||
Sbjct: 82618 acgagaacagcaggtgtacatggc 82595

>gb|AC084250.6| Homo sapiens chromosome 8, clone RP11-89F14, complete sequence
          Length = 151889

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aaatcacaaaaaagcatgag 41
              ||||||||||||||||||||
Sbjct: 146072 aaatcacaaaaaagcatgag 146053

>gb|AC074045.23| Homo sapiens Xp BAC RP11-60N3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162381

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    tgaaagattttatacagcag 232
              ||||||||||||||||||||
Sbjct: 141960 tgaaagattttatacagcag 141941

>gb|AC093883.2| Homo sapiens BAC clone RP11-660B13 from 4, complete sequence
          Length = 181124

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   gaaagattttatacagcagaaata 237
             ||||||||| ||||||||||||||
Sbjct: 20708 gaaagatttcatacagcagaaata 20731

>gb|AC020783.8| Homo sapiens chromosome 8, clone RP11-16M2, complete sequence
          Length = 153740

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    aaatcacaaaaaagcatgag 41
             ||||||||||||||||||||
Sbjct: 30622 aaatcacaaaaaagcatgag 30603

>emb|BX470136.8| Zebrafish DNA sequence from clone CH211-113J6 in linkage group 1,
             complete sequence
          Length = 105837

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   gatgcctctgttgaaggtggttta 279
             ||||||||||||||||||| ||||
Sbjct: 78452 gatgcctctgttgaaggtgattta 78429

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 229      gcagaaatactgggtggaggtgat 252
                ||||||||||| ||||||||||||
Sbjct: 20363207 gcagaaatacttggtggaggtgat 20363230

>gb|AC150660.4| Mus musculus BAC clone RP23-41F9 from chromosome 15, complete sequence
          Length = 229655

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     aaaaaagcatgagctacagagttc 52
              |||||||| |||||||||||||||
Sbjct: 221203 aaaaaagcctgagctacagagttc 221226

>gb|AC115612.2| Dictyostelium discoideum chromosome 2 map 6245135-6357017 strain AX4,
             complete sequence
          Length = 111882

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 168   aatcagcacacataaaaaatggta 191
             ||||| ||||||||||||||||||
Sbjct: 60918 aatcatcacacataaaaaatggta 60941

>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0052O11
          Length = 106467

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    gcagaaatactgggtggaggtgat 252
              ||||||||||| ||||||||||||
Sbjct: 105818 gcagaaatacttggtggaggtgat 105841

>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0678G09
          Length = 139220

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gcagaaatactgggtggaggtgat 252
             ||||||||||| ||||||||||||
Sbjct: 72107 gcagaaatacttggtggaggtgat 72130

>emb|AL713869.6| Zebrafish DNA sequence from clone BUSM1-75P05 in linkage group 1
             Contains a novel gene similar to GCP3 (spindle pole body
             protein), a novel gene and a CpG island, complete sequence
          Length = 104577

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   gatgcctctgttgaaggtggttta 279
             ||||||||||||||||||| ||||
Sbjct: 89180 gatgcctctgttgaaggtgattta 89157

>gb|AC172892.1| Mus musculus BAC clone RP23-269B2 from chromosome 16, complete sequence
          Length = 206740

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    atcagcacacataaaaaatg 188
              ||||||||||||||||||||
Sbjct: 131790 atcagcacacataaaaaatg 131771


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,427,924
Number of Sequences: 3902068
Number of extensions: 3427924
Number of successful extensions: 65607
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65529
Number of HSP's gapped (non-prelim): 78
length of query: 299
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 277
effective length of database: 17,147,199,772
effective search space: 4749774336844
effective search space used: 4749774336844
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)