ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane... 264 9e-68
2gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrop... 153 2e-34
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 92 7e-16
4dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 92 7e-16
5dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 7e-16
6dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds 92 7e-16
7dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase,... 92 7e-16
8emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 i... 42 0.58
9gb|AE000512.1| Thermotoga maritima MSB8, complete genome 42 0.58
10gb|AC114649.9| Mus musculus chromosome 5, clone RP24-150M14, com... 40 2.3
11gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com... 40 2.3
12gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosom... 40 2.3
13ref|XM_808881.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 2.3
14gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Canc... 40 2.3
15ref|XM_812966.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 2.3
16emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N1... 40 2.3
17ref|XM_632297.1| Dictyostelium discoideum hypothetical protein (... 38 9.1
18gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, com... 38 9.1
19gb|AC151967.6| Mus musculus BAC clone RP24-235L23 from chromosom... 38 9.1
20gb|AC110224.7| Mus musculus chromosome 18, clone RP24-286H12, co... 38 9.1
21gb|AC147974.2| Pan troglodytes BAC clone RP43-67J16 from 7, comp... 38 9.1
22gb|AC161346.7| Mus musculus chromosome 1, clone RP24-335G4, comp... 38 9.1
23gb|AC004891.1| Homo sapiens PAC clone RP4-800L12 from 7, complet... 38 9.1
24gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome... 38 9.1
25gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 38 9.1
26ref|XM_501774.1| Yarrowia lipolytica CLIB122, YALI0C12771g predi... 38 9.1
27emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chr... 38 9.1
28emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e... 38 9.1
29emb|Z12614.1|ATACCSYNG A.thaliana gene for ACC synthase 38 9.1
30emb|Y12776.1|ATY12776 Arabidopsis thaliana DNA, 40 kb surroundin... 38 9.1
31gb|AC105039.9| Homo sapiens chromosome 18, clone CTD-2357J19, co... 38 9.1
32gb|AC008694.6| Homo sapiens chromosome 5 clone CTB-6E24, complet... 38 9.1
33gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, com... 38 9.1
34gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 38 9.1
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
36gb|AC097711.2| Homo sapiens BAC clone RP11-162K6 from 4, complet... 38 9.1
37dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
38dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
39gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thali... 38 9.1
40emb|BX897671.5| Zebrafish DNA sequence from clone CH211-214K5 in... 38 9.1
41gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 38 9.1
42gb|AC132609.3| Mus musculus BAC clone RP23-351O8 from 12, comple... 38 9.1
43emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chr... 38 9.1
44emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 38 9.1 
>dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating
            inorganic pyrophosphatase, complete cds
          Length = 2649

 Score =  264 bits (133), Expect = 9e-68
 Identities = 136/137 (99%)
 Strand = Plus / Minus

                                                                        
Query: 49   caatcatcatgatatcattgttcaagggtgggttcaaacattatcgtcgtcatcatggga 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 caatcatcatgatatcattgttcaagggtgggttcaaacattatcgtcgtcatcatggga 2590

                                                                        
Query: 109  cgaggaaaatttgccaggcacataccaacgagggaggacatctggtctctctcttctact 168
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 cgaggaaaatttgccagacacataccaacgagggaggacatctggtctctctcttctact 2530

                             
Query: 169  acatggagctacaagcc 185
            |||||||||||||||||
Sbjct: 2529 acatggagctacaagcc 2513
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>gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrophosphatase mRNA,
            complete cds
          Length = 2671

 Score =  153 bits (77), Expect = 2e-34
 Identities = 103/111 (92%), Gaps = 3/111 (2%)
 Strand = Plus / Minus

                                                                        
Query: 78   gggttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccaggcacatacc--- 134
            |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   
Sbjct: 2617 gggttcaaacattatcgtcgtcatcacgggacgaggaaaatttgccagacacataccaat 2558

                                                               
Query: 135  aacgagggaggacatctggtctctctcttctactacatggagctacaagcc 185
            || ||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 aatgaccgaggacatctggtctctctcttctactacatggagctacaagcc 2507
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 91.7 bits (46), Expect = 7e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                             
Query: 80      gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 125
               ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3935071 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 3935026
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 91.7 bits (46), Expect = 7e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                           
Query: 80    gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 125
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40947 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 40902
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>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
            insert sequence
          Length = 2738

 Score = 91.7 bits (46), Expect = 7e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 80   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 125
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 2647
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>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 91.7 bits (46), Expect = 7e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 80   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 125
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 5906
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>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 91.7 bits (46), Expect = 7e-16
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 80   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 125
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 2632
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>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13,
              complete sequence
          Length = 182888

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    tggtctctctcttctactaca 171
              |||||||||||||||||||||
Sbjct: 109831 tggtctctctcttctactaca 109851
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     gatgagaatttagcacaggtg 38
              |||||||||||||||||||||
Sbjct: 397018 gatgagaatttagcacaggtg 396998
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>gb|AC114649.9| Mus musculus chromosome 5, clone RP24-150M14, complete sequence
          Length = 154765

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tctctctcttctactacatg 173
              ||||||||||||||||||||
Sbjct: 137646 tctctctcttctactacatg 137627
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>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    ctctctcttctactacatgg 174
              ||||||||||||||||||||
Sbjct: 166627 ctctctcttctactacatgg 166608
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>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence
          Length = 195911

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ctctctcttctactacatgg 174
              ||||||||||||||||||||
Sbjct: 178571 ctctctcttctactacatgg 178590
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>ref|XM_808881.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506661.50) partial mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  tcatgggacgaggaaaattt 120
            ||||||||||||||||||||
Sbjct: 1392 tcatgggacgaggaaaattt 1411
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>gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154964

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    tctggtctctctcttctact 168
              ||||||||||||||||||||
Sbjct: 108378 tctggtctctctcttctact 108359
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>ref|XM_812966.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511245.110) partial mRNA
          Length = 2988

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  tcatgggacgaggaaaattt 120
            ||||||||||||||||||||
Sbjct: 1392 tcatgggacgaggaaaattt 1411
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>emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N18 on chromosome 6q22.1-22.33,
             complete sequence
          Length = 84764

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   tctggtctctctcttctact 168
             ||||||||||||||||||||
Sbjct: 50835 tctggtctctctcttctact 50816
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>ref|XM_632297.1| Dictyostelium discoideum hypothetical protein (DDB0218884), partial
           mRNA
          Length = 1110

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  atgatatcattgttcaagg 75
           |||||||||||||||||||
Sbjct: 527 atgatatcattgttcaagg 545
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>gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, complete sequence
          Length = 214765

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   tctctctcttctactacat 172
             |||||||||||||||||||
Sbjct: 90639 tctctctcttctactacat 90621
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>gb|AC151967.6| Mus musculus BAC clone RP24-235L23 from chromosome 12, complete
             sequence
          Length = 184240

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 22    agaatttagcacaggtgagtgat 44
             |||| ||||||||||||||||||
Sbjct: 54458 agaagttagcacaggtgagtgat 54436
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>gb|AC110224.7| Mus musculus chromosome 18, clone RP24-286H12, complete sequence
          Length = 167379

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 149   tctggtctctctcttctactaca 171
             ||||||||||||||||| |||||
Sbjct: 33253 tctggtctctctcttctcctaca 33275
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>gb|AC147974.2| Pan troglodytes BAC clone RP43-67J16 from 7, complete sequence
          Length = 170261

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    atcattgttcaagggtggg 80
             |||||||||||||||||||
Sbjct: 96495 atcattgttcaagggtggg 96477
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>gb|AC161346.7| Mus musculus chromosome 1, clone RP24-335G4, complete sequence
          Length = 191681

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 154   tctctctcttctactacat 172
             |||||||||||||||||||
Sbjct: 90669 tctctctcttctactacat 90687
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>gb|AC004891.1| Homo sapiens PAC clone RP4-800L12 from 7, complete sequence
          Length = 112621

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    taagatgagaatttagcac 33
             |||||||||||||||||||
Sbjct: 81143 taagatgagaatttagcac 81161
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>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete
            sequence
          Length = 209579

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 149  tctggtctctctcttctactaca 171
            ||||||||||||||||| |||||
Sbjct: 3206 tctggtctctctcttctcctaca 3184
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     acaagcaagaactaagatgagaa 25
             ||||||||||||||||| |||||
Sbjct: 23215 acaagcaagaactaagaagagaa 23237
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>ref|XM_501774.1| Yarrowia lipolytica CLIB122, YALI0C12771g predicted mRNA
          Length = 570

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 93  cgtcgtcatcatgggacga 111
           |||||||||||||||||||
Sbjct: 135 cgtcgtcatcatgggacga 153
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>emb|AL445470.5| Human DNA sequence from clone RP11-421L10 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 86332

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 150   ctggtctctctcttctact 168
             |||||||||||||||||||
Sbjct: 63462 ctggtctctctcttctact 63480
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>emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e5, COMPLETE SEQUENCE
          Length = 132419

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 3     acaagcaagaactaagatgagaa 25
             ||||||||||||||||| |||||
Sbjct: 71934 acaagcaagaactaagaagagaa 71912
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>emb|Z12614.1|ATACCSYNG A.thaliana gene for ACC synthase
          Length = 5613

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 86   acattatcgtcgtcatcat 104
            |||||||||||||||||||
Sbjct: 4720 acattatcgtcgtcatcat 4738
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>emb|Y12776.1|ATY12776 Arabidopsis thaliana DNA, 40 kb surrounding ACS1 locus
          Length = 38483

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    acattatcgtcgtcatcat 104
             |||||||||||||||||||
Sbjct: 21278 acattatcgtcgtcatcat 21260
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>gb|AC105039.9| Homo sapiens chromosome 18, clone CTD-2357J19, complete sequence
          Length = 133591

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 153    gtctctctcttctactaca 171
              |||||||||||||||||||
Sbjct: 123650 gtctctctcttctactaca 123632
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>gb|AC008694.6| Homo sapiens chromosome 5 clone CTB-6E24, complete sequence
          Length = 136843

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   gggaggacatctggtctct 158
             |||||||||||||||||||
Sbjct: 51283 gggaggacatctggtctct 51265
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>gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, complete sequence
          Length = 95865

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 153   gtctctctcttctactaca 171
             |||||||||||||||||||
Sbjct: 77572 gtctctctcttctactaca 77590
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 9      aagaactaagatgagaatttagc 31
              ||||| |||||||||||||||||
Sbjct: 853849 aagaattaagatgagaatttagc 853827
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 149      tctggtctctctcttctactaca 171
                ||||||||||||| |||||||||
Sbjct: 30153328 tctggtctctctcctctactaca 30153350
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>gb|AC097711.2| Homo sapiens BAC clone RP11-162K6 from 4, complete sequence
          Length = 114657

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   gaggaaaatttgccaggca 128
             |||||||||||||||||||
Sbjct: 54483 gaggaaaatttgccaggca 54501
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>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0022F10
          Length = 150498

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 149   tctggtctctctcttctactaca 171
             ||||||||||||| |||||||||
Sbjct: 58150 tctggtctctctcctctactaca 58172
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>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0690B02
          Length = 153116

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 149    tctggtctctctcttctactaca 171
              ||||||||||||| |||||||||
Sbjct: 149318 tctggtctctctcctctactaca 149340
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>gb|AC061957.3|F22L4 Sequence of BAC F22L4 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 66131

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    acattatcgtcgtcatcat 104
             |||||||||||||||||||
Sbjct: 16257 acattatcgtcgtcatcat 16275
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>emb|BX897671.5| Zebrafish DNA sequence from clone CH211-214K5 in linkage group 4,
             complete sequence
          Length = 201108

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 147   catctggtctctctcttct 165
             |||||||||||||||||||
Sbjct: 40606 catctggtctctctcttct 40624
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 9       aagaactaagatgagaatttagc 31
               ||||| |||||||||||||||||
Sbjct: 3376894 aagaattaagatgagaatttagc 3376916
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>gb|AC132609.3| Mus musculus BAC clone RP23-351O8 from 12, complete sequence
          Length = 200045

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 22     agaatttagcacaggtgagtgat 44
              |||| ||||||||||||||||||
Sbjct: 141492 agaagttagcacaggtgagtgat 141470
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>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete
              sequence
          Length = 234878

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 34     aggtgagtgatacagcaatcatc 56
              |||||||| ||||||||||||||
Sbjct: 101885 aggtgagtaatacagcaatcatc 101863
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 93      cgtcgtcatcatgggacga 111
               |||||||||||||||||||
Sbjct: 1773966 cgtcgtcatcatgggacga 1773948


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,709,072
Number of Sequences: 3902068
Number of extensions: 1709072
Number of successful extensions: 138071
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137822
Number of HSP's gapped (non-prelim): 249
length of query: 185
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 163
effective length of database: 17,147,199,772
effective search space: 2794993562836
effective search space used: 2794993562836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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