>gb|BT019233.1| Zea mays clone Contig906.F mRNA sequence
          Length = 1470

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 208  tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgtacgttttgggctt 267
            ||||| ||||| |||||| |||||||||||||| |||||||| ||||| |  || |||||
Sbjct: 997  tgcttgctccgccttcggggggcctttccacttgaagttctcagcgtaggccttaggctt 1056

                        
Query: 268  cagaagaggtgt 279
            ||||||||||||
Sbjct: 1057 cagaagaggtgt 1068

>dbj|AK066419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066N17, full
           insert sequence
          Length = 820

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 234 tccacttaaagttctctgcgtacgttttgggcttcagaagaggtgtgtggcgctttctaa 293
           ||||||| ||||||||||| || | ||||| ||||| ||||||||| ||||| || ||||
Sbjct: 540 tccacttgaagttctctgcataagatttggccttcaaaagaggtgtatggcgtttcctaa 481

                  
Query: 294 ccacata 300
           |||||||
Sbjct: 480 ccacata 474

>gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence
          Length = 1896

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 208 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgta 255
           ||||| ||||| |||||| |||||||||||||| |||||||| |||||
Sbjct: 261 tgcttgctccgccttcggggggcctttccacttgaagttctcagcgta 308

>dbj|AK105064.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E08, full
           insert sequence
          Length = 848

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 234 tccacttaaagttctctgcgtacgttttgggcttcagaagaggtgtgtggcgctttctaa 293
           ||||||| ||||||||||| || | ||||| ||||| |||| |||| ||||| || ||||
Sbjct: 560 tccacttgaagttctctgcataagatttggccttcaaaagaagtgtatggcgtttcctaa 501

                  
Query: 294 ccacata 300
           |||||||
Sbjct: 500 ccacata 494

>gb|AY103700.1| Zea mays PCO104752 mRNA sequence
          Length = 837

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                       
Query: 208 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgtacgttttgggctt 267
           ||||| |||||  ||||| |||||| ||||||| |||||||| ||||| |  || ||| |
Sbjct: 583 tgcttgctccgctttcggagggcctctccacttgaagttctcagcgtaggccttaggcct 524

                                            
Query: 268 cagaagaggtgtgtggcgctttctaaccacata 300
           |||||||||||  ||||| || | |||||||||
Sbjct: 523 cagaagaggtgcatggcgtttccgaaccacata 491

>gb|AC131714.4| Mus musculus BAC clone RP23-179L6 from chromosome 18, complete sequence
          Length = 193005

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 152    agaaaaagaacatcttttgaaaa 174
              |||||||||||||||||||||||
Sbjct: 141816 agaaaaagaacatcttttgaaaa 141838

>gb|AC152454.5| Mus musculus BAC clone RP24-100N16 from 18, complete sequence
          Length = 224577

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 152   agaaaaagaacatcttttgaaaa 174
             |||||||||||||||||||||||
Sbjct: 46092 agaaaaagaacatcttttgaaaa 46114

>ref|XM_478918.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 438

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 264 gcttcagaagaggtgtgtggcgctttctaaccacata 300
           |||||| ||||||||| ||||| || |||||||||||
Sbjct: 421 gcttcaaaagaggtgtatggcgtttcctaaccacata 385

>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete
             sequence
          Length = 168712

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 39    gatgagagacaaattcagttgcagt 63
             |||||||||||||| ||||||||||
Sbjct: 60001 gatgagagacaaatacagttgcagt 60025

>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
             complete sequence
          Length = 867699

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    caaacatttttcatgagatga 43
             |||||||||||||||||||||
Sbjct: 96944 caaacatttttcatgagatga 96924

>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
          Length = 127126

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   tggaacaaagtaaaatcagc 140
             ||||||||||||||||||||
Sbjct: 11573 tggaacaaagtaaaatcagc 11554

>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    aaaagaacatcttttgaaaa 174
              ||||||||||||||||||||
Sbjct: 210663 aaaagaacatcttttgaaaa 210644

>emb|CR457453.7| Zebrafish DNA sequence from clone CH211-76I17 in linkage group 14,
              complete sequence
          Length = 171899

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     caaacatttttcatgagatg 42
              ||||||||||||||||||||
Sbjct: 113151 caaacatttttcatgagatg 113132

>gb|AC011394.5| Homo sapiens chromosome 5 clone CTB-179K12, complete sequence
          Length = 86973

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    caaattcagttgcagtgtgt 67
             ||||||||||||||||||||
Sbjct: 43051 caaattcagttgcagtgtgt 43032

>gb|AC010444.5| Homo sapiens chromosome 5 clone CTD-2234B10, complete sequence
          Length = 91489

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   cagagaaaaagaacatcttt 168
             ||||||||||||||||||||
Sbjct: 90457 cagagaaaaagaacatcttt 90476

>gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-41a4, complete
            sequence
          Length = 55550

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  tggaacaaagtaaaatcagc 140
            ||||||||||||||||||||
Sbjct: 1812 tggaacaaagtaaaatcagc 1831

>gb|AC026405.5| Homo sapiens chromosome 5 clone CTC-347N9, complete sequence
          Length = 168779

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   cagagaaaaagaacatcttt 168
             ||||||||||||||||||||
Sbjct: 31752 cagagaaaaagaacatcttt 31771

>gb|AC026407.4| Homo sapiens chromosome 5 clone CTC-370J7, complete sequence
          Length = 155344

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   caaattcagttgcagtgtgt 67
            ||||||||||||||||||||
Sbjct: 2674 caaattcagttgcagtgtgt 2693

>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191463

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gaattaacaaacatttttca 35
              ||||||||||||||||||||
Sbjct: 161431 gaattaacaaacatttttca 161412

>emb|BX649384.6| Zebrafish DNA sequence from clone CH211-199G17 in linkage group 19,
             complete sequence
          Length = 190998

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 57    ttgcagtgtgtgcttattacacgt 80
             ||||||||||||||| ||||||||
Sbjct: 44363 ttgcagtgtgtgctttttacacgt 44386

>dbj|AP006700.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H09, TM0550,
             complete sequence
          Length = 76403

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aaaaagaacatcttttgaaa 173
             ||||||||||||||||||||
Sbjct: 16880 aaaaagaacatcttttgaaa 16861


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,340,471
Number of Sequences: 3902068
Number of extensions: 3340471
Number of successful extensions: 64442
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64406
Number of HSP's gapped (non-prelim): 36
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)