>dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133J10, full
            insert sequence
          Length = 3753

 Score =  109 bits (55), Expect = 7e-21
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                        
Query: 235  catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 294
            |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 1293 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 1234

                                                                        
Query: 295  cacctccctcgccctacccgcacaaaatattacataagcatcagctgcatacttaccgac 354
            ||||||  | ||||| |||||||| || ||| |||||||||||||||| ||||| || ||
Sbjct: 1233 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgcgtacttgccaac 1174

                       
Query: 355  gccacaaagct 365
             ||||||||||
Sbjct: 1173 accacaaagct 1163

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                          
Query: 235    catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 294
              |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 193665 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 193724

                                                              
Query: 295    cacctccctcgccctacccgcacaaaatattacataagcatcagctgc 342
              ||||||  | ||||| |||||||| || ||| ||||||||||||||||
Sbjct: 193725 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 193772

>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0066B16
          Length = 190143

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                         
Query: 235   catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 294
             |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 89163 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 89222

                                                             
Query: 295   cacctccctcgccctacccgcacaaaatattacataagcatcagctgc 342
             ||||||  | ||||| |||||||| || ||| ||||||||||||||||
Sbjct: 89223 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 89270

>emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chromosome 1 Contains part
             of the NFIA gene for nuclear factor I/A, complete sequence
          Length = 78404

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 203   atactggaactgaactaatcca 224
             ||||||||||||||||||||||
Sbjct: 78037 atactggaactgaactaatcca 78058

>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence
          Length = 215326

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 355   gccacaaagctgcgtaacatgggtc 379
             |||||||||||||||||| ||||||
Sbjct: 38871 gccacaaagctgcgtaacgtgggtc 38895

>ref|XM_817662.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.2130)
           partial mRNA
          Length = 1233

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 318 aaaatattacataagcatcag 338
           |||||||||||||||||||||
Sbjct: 265 aaaatattacataagcatcag 245

>gb|AC158627.6| Mus musculus 10 BAC RP23-451N6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 183225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    catccatcaactgtcttttgt 41
             |||||||||||||||||||||
Sbjct: 63558 catccatcaactgtcttttgt 63538

>dbj|AB111859.1| Trypanosoma brucei brucei TTA2 gene for GPI transamidase component
           TTA2, complete cds
          Length = 1233

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 318 aaaatattacataagcatcag 338
           |||||||||||||||||||||
Sbjct: 265 aaaatattacataagcatcag 245

>gb|AC102730.15| Mus musculus chromosome 5, clone RP24-194J15, complete sequence
          Length = 167135

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 355    gccacaaagctgcgtaacatgggtc 379
              |||||||||||||||||| ||||||
Sbjct: 114741 gccacaaagctgcgtaacgtgggtc 114765

>gb|AC153365.7| Mus musculus 10 BAC RP23-273K11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207891

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 47     aatatcatctcaagcttaaca 67
              |||||||||||||||||||||
Sbjct: 111727 aatatcatctcaagcttaaca 111747

>gb|AC153540.4| Mus musculus 10 BAC RP23-356N9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 198205

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    catccatcaactgtcttttgt 41
             |||||||||||||||||||||
Sbjct: 71447 catccatcaactgtcttttgt 71467

>ref|XM_493771.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2096

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 ttacataagcatcagctgca 343
           ||||||||||||||||||||
Sbjct: 702 ttacataagcatcagctgca 721

>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230137

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   ccacagctgcttccccttgc 188
             ||||||||||||||||||||
Sbjct: 60236 ccacagctgcttccccttgc 60255

>gb|AC128571.4| Rattus norvegicus 6 BAC CH230-424O13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 194127

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   gggtccattcatttccaaca 394
             ||||||||||||||||||||
Sbjct: 40690 gggtccattcatttccaaca 40709

>emb|AL160168.11| Human DNA sequence from clone RP11-394O9 on chromosome 9, complete
              sequence
          Length = 151202

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    gctgcttccccttgcacttc 193
              ||||||||||||||||||||
Sbjct: 102368 gctgcttccccttgcacttc 102387

>gb|AC101846.8| Mus musculus chromosome 5, clone RP23-258M22, complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   ctcaaagcagacataattccagta 267
             ||||||||||||| ||||||||||
Sbjct: 68242 ctcaaagcagacaaaattccagta 68265

>gb|AC112184.2| Homo sapiens chromosome 5 clone RP11-168A11, complete sequence
          Length = 173346

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    tactgcttggacaatttctt 414
              ||||||||||||||||||||
Sbjct: 123643 tactgcttggacaatttctt 123624

>gb|AC012636.5|AC012636 Homo sapiens chromosome 5 clone CTD-2201I18, complete sequence
          Length = 175561

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   tactgcttggacaatttctt 414
             ||||||||||||||||||||
Sbjct: 42519 tactgcttggacaatttctt 42500

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 324     ttacataagcatcagctgca 343
               ||||||||||||||||||||
Sbjct: 3137229 ttacataagcatcagctgca 3137210

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    ccatccaggactgcatggcgccgc 165
              ||||||||||||| ||||||||||
Sbjct: 834883 ccatccaggactggatggcgccgc 834860

>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0041E11
          Length = 146335

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ttacataagcatcagctgca 343
             ||||||||||||||||||||
Sbjct: 81017 ttacataagcatcagctgca 80998

>dbj|AK069905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034H21, full
           insert sequence
          Length = 2096

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 ttacataagcatcagctgca 343
           ||||||||||||||||||||
Sbjct: 702 ttacataagcatcagctgca 721

>emb|BX088554.8| Zebrafish DNA sequence from clone DKEYP-4F12 in linkage group 20,
              complete sequence
          Length = 160766

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ttttgtcaggtaatatcatc 55
              ||||||||||||||||||||
Sbjct: 132923 ttttgtcaggtaatatcatc 132942

>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete
              sequence
          Length = 227762

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    tcaaagcagacataattcca 264
              ||||||||||||||||||||
Sbjct: 127415 tcaaagcagacataattcca 127434

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0433F09
          Length = 150150

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    ttacataagcatcagctgca 343
              ||||||||||||||||||||
Sbjct: 105269 ttacataagcatcagctgca 105250


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,759,338
Number of Sequences: 3902068
Number of extensions: 3759338
Number of successful extensions: 68230
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68133
Number of HSP's gapped (non-prelim): 97
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)