ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104411.1| Zea mays PCO124128 mRNA sequence 113 5e-22
2gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
3gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
5gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds 111 2e-21
6dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
7dbj|AK059336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 3e-11
10gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 78 3e-11
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
12ref|NM_101640.1| Arabidopsis thaliana SUVH7 (SU(VAR)3-9 HOMOLOG ... 52 0.002
13ref|NM_128034.2| Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21... 52 0.002
14gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 ma... 52 0.002
15gb|AF344451.1|AF344451 Arabidopsis thaliana SUVH8 (SUVH8) gene, ... 52 0.002
16gb|AF344450.1|AF344450 Arabidopsis thaliana SUVH7 (SUVH7) mRNA, ... 52 0.002
17gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thali... 52 0.002
18gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, co... 44 0.38
19gb|AF545813.1| Zea mays SET domain protein 113 (sdg113) mRNA, co... 44 0.38
20gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, comple... 44 0.38
21gb|AY112212.1| Zea mays CL3507_2 mRNA sequence 44 0.38
22ref|NM_191045.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Can... 42 1.5
25dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
28gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosom... 40 5.9
29gb|BT012756.1| Lycopersicon esculentum clone 113700R, mRNA sequence 40 5.9
30gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complet... 40 5.9
31gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 5.9
32emb|BX932790.1| Gallus gallus finished cDNA, clone ChEST276e2 40 5.9
33gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 5.9
34gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, co... 40 5.9 
>gb|AY104411.1| Zea mays PCO124128 mRNA sequence
          Length = 1300

 Score =  113 bits (57), Expect = 5e-22
 Identities = 60/61 (98%)
 Strand = Plus / Minus

                                                                       
Query: 381 tctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatg 440
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tctgaccataatcataggtaagctctgtcattggaggaatatgcttaattgcaaagaatg 713

            
Query: 441 c 441
           |
Sbjct: 712 c 712



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 306 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccga 364
           |||||||||||||||| || |||||  | |||||||||||||||||||||||| |||||
Sbjct: 871 tttagccaaaggaacctctacacttcggggaccaacataagcaacttttagacttccga 813
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>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                         
Query: 379   gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
             ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 32453 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 32512

                 
Query: 439   tgcg 442
             ||||
Sbjct: 32513 tgcg 32516



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                         
Query: 306   tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 365
             |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 32359 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 32418

                       
Query: 366   accctgaatt 375
             | || |||||
Sbjct: 32419 atccagaatt 32428
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0007P22, complete sequence
          Length = 148068

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                          
Query: 379    gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
              ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 143971 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 144030

                  
Query: 439    tgcg 442
              ||||
Sbjct: 144031 tgcg 144034



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                          
Query: 306    tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 365
              |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 143877 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 143936

                        
Query: 366    accctgaatt 375
              | || |||||
Sbjct: 143937 atccagaatt 143946
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                            
Query: 379      gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
                ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 22308845 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 22308786

                    
Query: 439      tgcg 442
                ||||
Sbjct: 22308785 tgcg 22308782



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 306      tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 365
                |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 22308939 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 22308880

                          
Query: 366      accctgaatt 375
                | || |||||
Sbjct: 22308879 atccagaatt 22308870
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>gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds
          Length = 2982

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                        
Query: 379  gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2421 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 2362

                
Query: 439  tgcg 442
            ||||
Sbjct: 2361 tgcg 2358



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 306  tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 365
            |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 2515 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 2456

                      
Query: 366  accctgaatt 375
            | || |||||
Sbjct: 2455 atccagaatt 2446
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>dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092A08, full
            insert sequence
          Length = 3270

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                        
Query: 379  gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2741 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 2682

                
Query: 439  tgcg 442
            ||||
Sbjct: 2681 tgcg 2678



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 306  tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 365
            |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 2835 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 2776

                      
Query: 366  accctgaatt 375
            | || |||||
Sbjct: 2775 atccagaatt 2766
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>dbj|AK059336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A12, full
            insert sequence
          Length = 1858

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                        
Query: 379  gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
            ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1449 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 1390

                
Query: 439  tgcg 442
            ||||
Sbjct: 1389 tgcg 1386
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                            
Query: 379      gctctgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
                ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 22618756 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 22618697

                    
Query: 439      tgcg 442
                ||||
Sbjct: 22618696 tgcg 22618693



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 306      tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 365
                |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 22618850 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 22618791

                          
Query: 366      accctgaatt 375
                | || |||||
Sbjct: 22618790 atccagaatt 22618781
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 383      tgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgc 441
                |||||||||||||| |||||||||||||| |||||||| | ||| ||||||||||||||
Sbjct: 11536905 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgc 11536847
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>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 383   tgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgc 441
             |||||||||||||| |||||||||||||| |||||||| | ||| ||||||||||||||
Sbjct: 87477 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgc 87419
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 383      tgaccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaatgc 441
                |||||||||||||| |||||||||||||| |||||||| | ||| ||||||||||||||
Sbjct: 11533668 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgc 11533610
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>ref|NM_101640.1| Arabidopsis thaliana SUVH7 (SU(VAR)3-9 HOMOLOG 7); histone-lysine
            N-methyltransferase/ zinc ion binding AT1G17770 (SUVH7)
            mRNA, complete cds
          Length = 2082

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 435
            ||||| |||||||| | ||||||||| |||||||||||||| || |||||
Sbjct: 1979 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 1930
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>ref|NM_128034.2| Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21) AT2G24740 (SDG21)
            mRNA, complete cds
          Length = 2268

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 435
            ||||| |||||||| | |||||||||||||||||| ||||| || |||||
Sbjct: 2168 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 2119
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>gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 map mi238, complete
             sequence
          Length = 66237

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 386   ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 435
             ||||| |||||||| | |||||||||||||||||| ||||| || |||||
Sbjct: 26691 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 26740
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>gb|AF344451.1|AF344451 Arabidopsis thaliana SUVH8 (SUVH8) gene, complete cds
          Length = 2268

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 435
            ||||| |||||||| | |||||||||||||||||| ||||| || |||||
Sbjct: 2168 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 2119
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>gb|AF344450.1|AF344450 Arabidopsis thaliana SUVH7 (SUVH7) mRNA, complete cds
          Length = 2082

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 435
            ||||| |||||||| | ||||||||| |||||||||||||| || |||||
Sbjct: 1979 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 1930
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>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 75133

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaa 435
            ||||| |||||||| | ||||||||| |||||||||||||| || |||||
Sbjct: 3730 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 3681
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>gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, complete cds
          Length = 2487

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 385  accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
            |||||| ||||| || || |||||||| || ||||||||||| | |||||||||
Sbjct: 2070 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaa 2017
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>gb|AF545813.1| Zea mays SET domain protein 113 (sdg113) mRNA, complete cds
          Length = 2428

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 385  accataatcatatgtaagctctgtcattggaggaatatgctt 426
            |||||| ||||| || | ||||||||| ||||||||||||||
Sbjct: 2254 accatagtcataagtcaactctgtcatgggaggaatatgctt 2213
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>gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, complete sequence
          Length = 2562

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 385 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
           |||||| ||||| || || |||||||| || ||||||||||| | |||||||||
Sbjct: 533 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaa 586
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>gb|AY112212.1| Zea mays CL3507_2 mRNA sequence
          Length = 824

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 385 accataatcatatgtaagctctgtcattggaggaatatgcttaattgcaaagaa 438
           |||||| ||||| || || |||||||| || ||||||||||| | |||||||||
Sbjct: 479 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaa 532
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>ref|NM_191045.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2211

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgctt 426
            ||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 2123 ccatagtcataagtcagttctgtcatgggaggaatatgctt 2083
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 386      ccataatcatatgtaagctctgtcattggaggaatatgctt 426
                ||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 34476671 ccatagtcataagtcagttctgtcatgggaggaatatgctt 34476631
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>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92909

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   agaaagaggcagcaaagttat 215
             |||||||||||||||||||||
Sbjct: 59901 agaaagaggcagcaaagttat 59881
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 386    ccataatcatatgtaagctctgtcattggaggaatatgctt 426
              ||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 159015 ccatagtcataagtcagttctgtcatgggaggaatatgctt 158975
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 386   ccataatcatatgtaagctctgtcattggaggaatatgctt 426
             ||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 52390 ccatagtcataagtcagttctgtcatgggaggaatatgctt 52350
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>dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H03, full
            insert sequence
          Length = 2926

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 386  ccataatcatatgtaagctctgtcattggaggaatatgctt 426
            ||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 2426 ccatagtcataagtcagttctgtcatgggaggaatatgctt 2386
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>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence
          Length = 204731

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   gattatttagccaaaggaac 320
             ||||||||||||||||||||
Sbjct: 46135 gattatttagccaaaggaac 46154
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>gb|BT012756.1| Lycopersicon esculentum clone 113700R, mRNA sequence
          Length = 1165

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 233 caccacacccataat-gccgccgccaccataa 263
           ||||| ||||||||| ||||||||||||||||
Sbjct: 529 caccagacccataattgccgccgccaccataa 498
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>gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complete sequence
          Length = 189627

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    gattatttagccaaaggaac 320
              ||||||||||||||||||||
Sbjct: 153607 gattatttagccaaaggaac 153626
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 297     ggttgattatttagccaaag 316
               ||||||||||||||||||||
Sbjct: 1242833 ggttgattatttagccaaag 1242852
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>emb|BX932790.1| Gallus gallus finished cDNA, clone ChEST276e2
          Length = 1125

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 106  actacaactaacaacaccacagaa 129
            |||||||||||||| |||||||||
Sbjct: 1041 actacaactaacaagaccacagaa 1018
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 285     gtatcccttaagggttgattattt 308
               |||||||||||||||||| |||||
Sbjct: 3583495 gtatcccttaagggttgagtattt 3583472
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>gb|AC004812.1|AC004812 Homo sapiens PAC clone 267D11 from 12, complete sequence
          Length = 138532

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ctgcaggcttgaaacatctt 49
             ||||||||||||||||||||
Sbjct: 45496 ctgcaggcttgaaacatctt 45515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,681,197
Number of Sequences: 3902068
Number of extensions: 3681197
Number of successful extensions: 61221
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61007
Number of HSP's gapped (non-prelim): 215
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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