>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                           
Query: 257     tcagcttcagcaaaaccataggagctgaagtgcttcaccttgaacttccactcgccctta 316
               ||||||||| |||| |||||||||||||| ||||| ||| |||| |||||||||||||| 
Sbjct: 3343077 tcagcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgcccttg 3343018

                                                                           
Query: 317     gcagcgtcaaacgagatgaactccacaccctgctcctcagccttcttcaccagcatctcc 376
               ||||| || || |||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 3343017 gcagcatcgaatgagatgaactcagcaccctgctcctcagccttcttcaccagtatctcc 3342958

                                               
Query: 377     ttgtacttgtccacccttggaccctccgtgta 408
               ||||||||| ||||||| |||||||| |||||
Sbjct: 3342957 ttgtacttgcccaccctcggaccctctgtgta 3342926



 Score =  161 bits (81), Expect = 2e-36
 Identities = 135/153 (88%)
 Strand = Plus / Minus

                                                                           
Query: 256     ttcagcttcagcaaaaccataggagctgaagtgcttcaccttgaacttccactcgccctt 315
               |||||||||| |||| |||||||||||||| ||||| ||| |||| ||||||||||| ||
Sbjct: 3351813 ttcagcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgccatt 3351754

                                                                           
Query: 316     agcagcgtcaaacgagatgaactccacaccctgctcctcagccttcttcaccagcatctc 375
                 | || || || |||||||||||  |||||||||||||||| |||||||||||||||||
Sbjct: 3351753 gacggcatcgaaagagatgaactcagcaccctgctcctcagctttcttcaccagcatctc 3351694

                                                
Query: 376     cttgtacttgtccacccttggaccctccgtgta 408
               |||||||||||||||||| |||||||| |||||
Sbjct: 3351693 cttgtacttgtccaccctcggaccctctgtgta 3351661



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 215      aacttccatggacggggcta 234
                ||||||||||||||||||||
Sbjct: 18082524 aacttccatggacggggcta 18082505

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                           
Query: 257     tcagcttcagcaaaaccataggagctgaagtgcttcaccttgaacttccactcgccctta 316
               ||||||||| |||| |||||||||||||| ||||| ||| |||| |||||||||||||| 
Sbjct: 3343022 tcagcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgcccttg 3342963

                                                                           
Query: 317     gcagcgtcaaacgagatgaactccacaccctgctcctcagccttcttcaccagcatctcc 376
               ||||| || || |||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 3342962 gcagcatcgaatgagatgaactcagcaccctgctcctcagccttcttcaccagtatctcc 3342903

                                               
Query: 377     ttgtacttgtccacccttggaccctccgtgta 408
               ||||||||| ||||||| |||||||| |||||
Sbjct: 3342902 ttgtacttgcccaccctcggaccctctgtgta 3342871



 Score =  161 bits (81), Expect = 2e-36
 Identities = 135/153 (88%)
 Strand = Plus / Minus

                                                                           
Query: 256     ttcagcttcagcaaaaccataggagctgaagtgcttcaccttgaacttccactcgccctt 315
               |||||||||| |||| |||||||||||||| ||||| ||| |||| ||||||||||| ||
Sbjct: 3351758 ttcagcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgccatt 3351699

                                                                           
Query: 316     agcagcgtcaaacgagatgaactccacaccctgctcctcagccttcttcaccagcatctc 375
                 | || || || |||||||||||  |||||||||||||||| |||||||||||||||||
Sbjct: 3351698 gacggcatcgaaagagatgaactcagcaccctgctcctcagctttcttcaccagcatctc 3351639

                                                
Query: 376     cttgtacttgtccacccttggaccctccgtgta 408
               |||||||||||||||||| |||||||| |||||
Sbjct: 3351638 cttgtacttgtccaccctcggaccctctgtgta 3351606



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 215      aacttccatggacggggcta 234
                ||||||||||||||||||||
Sbjct: 18008845 aacttccatggacggggcta 18008826

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                         
Query: 257   tcagcttcagcaaaaccataggagctgaagtgcttcaccttgaacttccactcgccctta 316
             ||||||||| |||| |||||||||||||| ||||| ||| |||| |||||||||||||| 
Sbjct: 22130 tcagcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgcccttg 22071

                                                                         
Query: 317   gcagcgtcaaacgagatgaactccacaccctgctcctcagccttcttcaccagcatctcc 376
             ||||| || || |||||||||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 22070 gcagcatcgaatgagatgaactcagcaccctgctcctcagccttcttcaccagtatctcc 22011

                                             
Query: 377   ttgtacttgtccacccttggaccctccgtgta 408
             ||||||||| ||||||| |||||||| |||||
Sbjct: 22010 ttgtacttgcccaccctcggaccctctgtgta 21979



 Score =  161 bits (81), Expect = 2e-36
 Identities = 135/153 (88%)
 Strand = Plus / Minus

                                                                         
Query: 256   ttcagcttcagcaaaaccataggagctgaagtgcttcaccttgaacttccactcgccctt 315
             |||||||||| |||| |||||||||||||| ||||| ||| |||| ||||||||||| ||
Sbjct: 30866 ttcagcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgccatt 30807

                                                                         
Query: 316   agcagcgtcaaacgagatgaactccacaccctgctcctcagccttcttcaccagcatctc 375
               | || || || |||||||||||  |||||||||||||||| |||||||||||||||||
Sbjct: 30806 gacggcatcgaaagagatgaactcagcaccctgctcctcagctttcttcaccagcatctc 30747

                                              
Query: 376   cttgtacttgtccacccttggaccctccgtgta 408
             |||||||||||||||||| |||||||| |||||
Sbjct: 30746 cttgtacttgtccaccctcggaccctctgtgta 30714

>gb|BT018481.1| Zea mays clone EL01N0424C07.d mRNA sequence
          Length = 1900

 Score =  111 bits (56), Expect = 2e-21
 Identities = 107/124 (86%)
 Strand = Plus / Minus

                                                                        
Query: 272  ccataggagctgaagtgcttcaccttgaacttccactcgcccttagcagcgtcaaacgag 331
            ||||||| |||||| ||||||||| ||||||||||||| ||||| ||||| ||||| || 
Sbjct: 1733 ccataggcgctgaaatgcttcaccctgaacttccactctcccttggcagcatcaaaggac 1674

                                                                        
Query: 332  atgaactccacaccctgctcctcagccttcttcaccagcatctccttgtacttgtccacc 391
            |  |||||| | ||||||||||| |||||||||| |||||||||| ||||| | ||||||
Sbjct: 1673 acaaactccgcgccctgctcctccgccttcttcatcagcatctccctgtacctctccacc 1614

                
Query: 392  cttg 395
            ||||
Sbjct: 1613 cttg 1610

>gb|BT018715.1| Zea mays clone EL01N0517E03.d mRNA sequence
          Length = 1871

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 103/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 275  taggagctgaagtgcttcaccttgaacttccactcgcccttagcagcgtcaaacgagatg 334
            |||| |||||||||||||||| ||||||||||||| |||||  ||||||| || || |  
Sbjct: 1565 taggcgctgaagtgcttcaccctgaacttccactctcccttgacagcgtcgaaggacaca 1506

                                                                        
Query: 335  aactccacaccctgctcctcagccttcttcaccagcatctccttgtacttgtccaccctt 394
            |||||  | ||||||||||| ||||||||||||||||||||| ||||| | ||||| |||
Sbjct: 1505 aactctgcgccctgctcctccgccttcttcaccagcatctccctgtacctctccactctt 1446

             
Query: 395  g 395
            |
Sbjct: 1445 g 1445

>gb|AY110896.1| Zea mays CL23032_-2 mRNA sequence
          Length = 625

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 272 ccataggagctgaagtgcttcaccttgaacttccactcgcccttagcagcgtcaaa 327
           ||||||| |||||||||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 181 ccataggcgctgaagtgcttcaccctgaacttccactctcccttggcagcatcaaa 236

>gb|AY389582.1| Hyacinthus orientalis nucleoporin mRNA, partial cds
          Length = 732

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 267 caaaaccataggagctgaagtgcttcaccttgaacttccactc 309
           ||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 430 caaaatcatagcagctgaagtgcttcaccctgaacttccactc 388

>ref|XM_518147.1| PREDICTED: Pan troglodytes LOC462325 (LOC462325), mRNA
          Length = 17490

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 337  ctccacaccctgctcctcagcct 359
            |||||||||||||||||||||||
Sbjct: 3636 ctccacaccctgctcctcagcct 3614

>gb|AC110034.8| Mus musculus chromosome 3, clone RP23-237L12, complete sequence
          Length = 188908

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 345    cctgctcctcagccttcttcacc 367
              |||||||||||||||||||||||
Sbjct: 134879 cctgctcctcagccttcttcacc 134857

>gb|AC156552.10| Mus musculus chromosome 3, clone RP24-271K21, complete sequence
          Length = 168716

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 345    cctgctcctcagccttcttcacc 367
              |||||||||||||||||||||||
Sbjct: 168214 cctgctcctcagccttcttcacc 168236

>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 109560

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 161   agcattattcaaaaaacaaaag 182
             ||||||||||||||||||||||
Sbjct: 45685 agcattattcaaaaaacaaaag 45664

>gb|DQ115799.1| Bacillus badius penicillin G acylase (pac) gene, complete cds;
           macronuclear
          Length = 2617

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 113 aaacaagaaagatttgtacaa 133
           |||||||||||||||||||||
Sbjct: 311 aaacaagaaagatttgtacaa 331

>gb|AC161470.3| Gallus gallus BAC clone CH261-85J8 from chromosome ul, complete sequence
          Length = 213142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 339    ccacaccctgctcctcagcct 359
              |||||||||||||||||||||
Sbjct: 104745 ccacaccctgctcctcagcct 104725

>gb|AC006195.1|AC006195 Homo sapiens clone RP11-350H1 from 7p14-15, complete sequence
          Length = 150242

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   agcattattcaaaaaacaaaa 181
             |||||||||||||||||||||
Sbjct: 45337 agcattattcaaaaaacaaaa 45357

>ref|XM_585718.2| PREDICTED: Bos taurus similar to tumor protein p53 inducible protein
            3, transcript variant 1 (LOC508875), mRNA
          Length = 1957

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 361  cttcaccagcatctccttgtactt 384
            |||||||||||||| |||||||||
Sbjct: 1226 cttcaccagcatctgcttgtactt 1203

>gb|AC147329.2| Pan troglodytes BAC clone RP43-21F14 from 7, complete sequence
          Length = 189770

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    cttcagcaaaaccataggag 280
              ||||||||||||||||||||
Sbjct: 109436 cttcagcaaaaccataggag 109455

>gb|AY813463.1| Schistosoma japonicum SJCHGC01579 protein mRNA, complete cds
          Length = 1930

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 121 aagatttgtacaaaacatagaaac 144
           |||| |||||||||||||||||||
Sbjct: 595 aagaattgtacaaaacatagaaac 572

>gb|AC145901.2| Pan troglodytes BAC clone RP43-9F20 from 7, complete sequence
          Length = 176187

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cttcagcaaaaccataggag 280
            ||||||||||||||||||||
Sbjct: 5023 cttcagcaaaaccataggag 5004

>gb|AY494082.1| Homo sapiens cell division cycle 25B (CDC25B) gene, complete cds
          Length = 13771

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 329  gagatgaactccacaccctgctcc 352
            |||||||||||||||| |||||||
Sbjct: 8403 gagatgaactccacactctgctcc 8380

>gb|AY223400.1| Schistosoma japonicum clone ZZZ33 mRNA sequence
          Length = 1951

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 121 aagatttgtacaaaacatagaaac 144
           |||| |||||||||||||||||||
Sbjct: 596 aagaattgtacaaaacatagaaac 573

>gb|AC079589.6| Homo sapiens BAC clone RP11-589K23 from 7, complete sequence
          Length = 19706

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cttcagcaaaaccataggag 280
            ||||||||||||||||||||
Sbjct: 1363 cttcagcaaaaccataggag 1344

>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the
              5' end of the ADAM33 gene for a disintegrin and
              metalloproteinase domain 33 protein, the SN gene encoding
              sialoadhesin, the C20orf60 gene, the C20orf27 gene, the
              C20orf28 gene, the CENPB gene for centromere protein B, the
              CDC25B gene for cell division cycle protein 25B, the
              C20orf29 gene, the 5' end of the gene for a novel protein
              (KIAA1271) and nine CpG islands, complete sequence
          Length = 185820

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    gagatgaactccacaccctgctcc 352
              |||||||||||||||| |||||||
Sbjct: 127277 gagatgaactccacactctgctcc 127254

>gb|AC012594.7| Homo sapiens BAC clone RP11-519L16 from 2, complete sequence
          Length = 166702

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   caaaacatagaaacgaaaga 150
             ||||||||||||||||||||
Sbjct: 52957 caaaacatagaaacgaaaga 52976

>gb|AF027333.1|AF027333 Rattus norvegicus thyroid-specific transcription factor 1 gene,
            promoter region and partial cds
          Length = 3056

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  ccctgctcctcagccttctt 363
            ||||||||||||||||||||
Sbjct: 2315 ccctgctcctcagccttctt 2334

>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 341    acaccctgctcctcagccttcttc 364
              ||||||| ||||||||||||||||
Sbjct: 952744 acaccctcctcctcagccttcttc 952721

>gb|AY815317.1| Schistosoma japonicum clone SJCHGC01580 unknown mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 121 aagatttgtacaaaacatagaaac 144
           |||| |||||||||||||||||||
Sbjct: 403 aagaattgtacaaaacatagaaac 380

>emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb0031E19 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 124294

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  aacttccatggacggggcta 234
            ||||||||||||||||||||
Sbjct: 3168 aacttccatggacggggcta 3187

>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155927

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   aacttccatggacggggcta 234
             ||||||||||||||||||||
Sbjct: 36202 aacttccatggacggggcta 36183

>gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, complete sequence
          Length = 225031

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    cttgtccacccttggaccct 401
              ||||||||||||||||||||
Sbjct: 163738 cttgtccacccttggaccct 163719

>gb|AC157784.2| Mus musculus chromosome 18, clone RP24-163C18, complete sequence
          Length = 182283

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ttcaccagcatctccttgta 381
             ||||||||||||||||||||
Sbjct: 96309 ttcaccagcatctccttgta 96328


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,551,912
Number of Sequences: 3902068
Number of extensions: 4551912
Number of successful extensions: 86387
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86253
Number of HSP's gapped (non-prelim): 130
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)