Clone Name | rbastl25g01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HCP1_BRARE (Q7ZWG6) Heme carrier protein 1 | 30 | 2.2 | 2 | CORA_WHV8 (P69711) Core antigen | 29 | 4.9 | 3 | CORA_WHV7 (P69710) Core antigen | 29 | 4.9 | 4 | CORA_WHV59 (P69712) Core antigen | 29 | 4.9 | 5 | CORA_WHV1 (P69709) Core antigen | 29 | 4.9 |
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>HCP1_BRARE (Q7ZWG6) Heme carrier protein 1| Length = 481 Score = 30.0 bits (66), Expect = 2.2 Identities = 10/23 (43%), Positives = 19/23 (82%) Frame = -2 Query: 180 VITVYLGCGEIFLLSWVSSPRCY 112 V+TV+LGC ++++L +S+P C+ Sbjct: 297 VVTVHLGCSDLYVLYELSAPLCW 319
>CORA_WHV8 (P69711) Core antigen| Length = 188 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 305 SIIFHVKIISEGMHS*QESCN*SGLMMKQPSTFTPPN 415 S+ FH+ ++ G H+ QE G+ ++ P+ + PPN Sbjct: 100 SLWFHLSCLTFGQHTVQEFLVSFGVWIRTPAPYRPPN 136
>CORA_WHV7 (P69710) Core antigen| Length = 188 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 305 SIIFHVKIISEGMHS*QESCN*SGLMMKQPSTFTPPN 415 S+ FH+ ++ G H+ QE G+ ++ P+ + PPN Sbjct: 100 SLWFHLSCLTFGQHTVQEFLVSFGVWIRTPAPYRPPN 136
>CORA_WHV59 (P69712) Core antigen| Length = 188 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 305 SIIFHVKIISEGMHS*QESCN*SGLMMKQPSTFTPPN 415 S+ FH+ ++ G H+ QE G+ ++ P+ + PPN Sbjct: 100 SLWFHLSCLTFGQHTVQEFLVSFGVWIRTPAPYRPPN 136
>CORA_WHV1 (P69709) Core antigen| Length = 188 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 305 SIIFHVKIISEGMHS*QESCN*SGLMMKQPSTFTPPN 415 S+ FH+ ++ G H+ QE G+ ++ P+ + PPN Sbjct: 100 SLWFHLSCLTFGQHTVQEFLVSFGVWIRTPAPYRPPN 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,358,415 Number of Sequences: 219361 Number of extensions: 1277555 Number of successful extensions: 2241 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2241 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)