ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 129 7e-27
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 129 7e-27
3dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 7e-27
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 129 7e-27
5gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, compl... 48 0.019
6gb|AC151408.1| Pan troglodytes chromosome X clone PTB-007P20 map... 44 0.30
7gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complet... 44 0.30
8gb|AC164957.2| Mus musculus BAC clone RP23-480L9 from chromosome... 44 0.30
9emb|AL031117.1|HS914P14 Human DNA sequence from clone RP5-914P14... 44 0.30
10emb|AL606467.5| Human DNA sequence from clone RP13-172P16 on chr... 42 1.2
11gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, comp... 42 1.2
12gb|AC027627.6| Homo sapiens BAC clone RP11-376O6 from 4, complet... 42 1.2
13emb|CT485603.4| RP43-005L22, complete sequence 42 1.2
14gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, comp... 40 4.7
15gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromo... 40 4.7
16gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, co... 40 4.7
17gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosom... 40 4.7
18gb|AC122795.3| Mus musculus BAC clone RP24-226D9 from chromosome... 40 4.7
19emb|CR381602.30| Zebrafish DNA sequence from clone DKEY-183M22 i... 40 4.7
20emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on ch... 40 4.7
21emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chr... 40 4.7
22emb|AL845311.9| Human DNA sequence from clone RP11-402N8 on chro... 40 4.7
23emb|AL354874.14| Human DNA sequence from clone RP11-38P6 on chro... 40 4.7
24emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chr... 40 4.7
25gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, comp... 40 4.7
26gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, com... 40 4.7
27gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, comp... 40 4.7
28emb|CR626925.1| Human DNA sequence from clone XX-NCIH2171_3N23, ... 40 4.7
29emb|CR626893.1| Human DNA sequence from clone XX-NCIH2171_14M18,... 40 4.7
30gb|AF334829.1| Homo sapiens mitochondrial RNA-processing endorib... 40 4.7
31gb|AC109494.3| Homo sapiens chromosome 5 clone RP11-783J1, compl... 40 4.7
32gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, comp... 40 4.7
33gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, com... 40 4.7
34gb|AC008842.6| Homo sapiens chromosome 5 clone CTD-2155H8, compl... 40 4.7
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
36gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 40 4.7
37gb|AC010165.10|AC010165 Homo sapiens chromosome 5 clone RP11-17J... 40 4.7
38gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308... 40 4.7
39dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
40dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
41emb|BX072582.6| Zebrafish DNA sequence from clone DKEY-222O19 in... 40 4.7
42gb|AY919043.1| Homo sapiens truncated REV1-like (yeast) (REV1L) ... 40 4.7
43emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chr... 40 4.7
44gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, compl... 40 4.7
45gb|AC005952.2| Homo sapiens chromosome 19, cosmid F19847, comple... 40 4.7
46emb|AL808015.4| Mouse DNA sequence from clone RP23-467C11 on chr... 40 4.7
47emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chro... 40 4.7

>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score =  129 bits (65), Expect = 7e-27
 Identities = 95/105 (90%)
 Strand = Plus / Plus

                                                                         
Query: 248   ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307
             |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 95649 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 95708

                                                          
Query: 308   tgtaccaccaagaatgagctgcacatcaggtctgccgctctctga 352
             ||| || |||||||| |||| |||||||||||||| ||| |||||
Sbjct: 95709 tgttcccccaagaataagctccacatcaggtctgctgctgtctga 95753



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  129 bits (65), Expect = 7e-27
 Identities = 95/105 (90%)
 Strand = Plus / Minus

                                                                           
Query: 248     ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307
               |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 3318645 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 3318586

                                                            
Query: 308     tgtaccaccaagaatgagctgcacatcaggtctgccgctctctga 352
               ||| || |||||||| |||| |||||||||||||| ||| |||||
Sbjct: 3318585 tgttcccccaagaataagctccacatcaggtctgctgctgtctga 3318541



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>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full
            insert sequence
          Length = 3521

 Score =  129 bits (65), Expect = 7e-27
 Identities = 95/105 (90%)
 Strand = Plus / Minus

                                                                        
Query: 248  ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307
            |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2804 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 2745

                                                         
Query: 308  tgtaccaccaagaatgagctgcacatcaggtctgccgctctctga 352
            ||| || |||||||| |||| |||||||||||||| ||| |||||
Sbjct: 2744 tgttcccccaagaataagctccacatcaggtctgctgctgtctga 2700



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  129 bits (65), Expect = 7e-27
 Identities = 95/105 (90%)
 Strand = Plus / Minus

                                                                           
Query: 248     ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307
               |||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 3327350 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 3327291

                                                            
Query: 308     tgtaccaccaagaatgagctgcacatcaggtctgccgctctctga 352
               ||| || |||||||| |||| |||||||||||||| ||| |||||
Sbjct: 3327290 tgttcccccaagaataagctccacatcaggtctgctgctgtctga 3327246



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>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence
          Length = 169122

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 142   caaaaatcccatctcagaagcaaaacaa 169
             ||||||||||||||||||| ||||||||
Sbjct: 30221 caaaaatcccatctcagaaacaaaacaa 30248



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>gb|AC151408.1| Pan troglodytes chromosome X clone PTB-007P20 map human ortholog q23,
             complete sequence
          Length = 68318

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 162   caaaacaatgtacagattaaat 183
             ||||||||||||||||||||||
Sbjct: 27525 caaaacaatgtacagattaaat 27546



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>gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complete sequence
          Length = 160626

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 168   aatgtacagattaaatttacat 189
             ||||||||||||||||||||||
Sbjct: 41544 aatgtacagattaaatttacat 41523



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>gb|AC164957.2| Mus musculus BAC clone RP23-480L9 from chromosome 17, complete sequence
          Length = 183439

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 165   aacaatgtacagattaaattta 186
             ||||||||||||||||||||||
Sbjct: 47295 aacaatgtacagattaaattta 47316



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>emb|AL031117.1|HS914P14 Human DNA sequence from clone RP5-914P14 on chromosome Xq23 Contains the
              3' end of the PAK3 gene for p21 (CDKN1A)-activated kinase
              3, the CAPN6 gene for calpain 6, a glutamate dehydrogenase
              1 (GLUD1) pseudogene and the 3' end of the DCX gene for
              doublecortex; lissencephaly, X-linked (doublecortin),
              complete sequence
          Length = 155375

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 162    caaaacaatgtacagattaaat 183
              ||||||||||||||||||||||
Sbjct: 103409 caaaacaatgtacagattaaat 103430



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>emb|AL606467.5| Human DNA sequence from clone RP13-172P16 on chromosome Xp21.1-21.3
             Contains a High mobility group protein 1
             (HMG-1)(LOC340573) pseudogene, a novel gene and the 5'end
             of a novel gene (LOC158730), complete sequence
          Length = 138093

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     ccaaaggtatagtctaaatac 24
             |||||||||||||||||||||
Sbjct: 22518 ccaaaggtatagtctaaatac 22538



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>gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, complete sequence
          Length = 200604

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   caaaacaatgtacagattaaa 182
             |||||||||||||||||||||
Sbjct: 62585 caaaacaatgtacagattaaa 62605



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>gb|AC027627.6| Homo sapiens BAC clone RP11-376O6 from 4, complete sequence
          Length = 191665

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 147   atcccatctcagaagcaaaacaatg 171
             ||||||||||||||||| |||||||
Sbjct: 26373 atcccatctcagaagcataacaatg 26397



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>emb|CT485603.4| RP43-005L22, complete sequence
          Length = 204041

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     ccaaaggtatagtctaaatac 24
             |||||||||||||||||||||
Sbjct: 22785 ccaaaggtatagtctaaatac 22805



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>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence
          Length = 203580

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    taaatactgggctgaagggg 37
             ||||||||||||||||||||
Sbjct: 29660 taaatactgggctgaagggg 29679



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>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete
             sequence
          Length = 161457

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   attaatgtctaagtaaagct 259
             ||||||||||||||||||||
Sbjct: 73115 attaatgtctaagtaaagct 73096



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>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence
          Length = 176607

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 163    aaaacaatgtacagattaaattta 186
              ||||||||||||||||| ||||||
Sbjct: 153857 aaaacaatgtacagattcaattta 153880



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>gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosome 3, complete sequence
          Length = 175131

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     taaatactgggctgaagggg 37
              ||||||||||||||||||||
Sbjct: 141126 taaatactgggctgaagggg 141145



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>gb|AC122795.3| Mus musculus BAC clone RP24-226D9 from chromosome 6, complete sequence
          Length = 146405

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tatgtctaattaatgtctaa 251
             ||||||||||||||||||||
Sbjct: 94213 tatgtctaattaatgtctaa 94194



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>emb|CR381602.30| Zebrafish DNA sequence from clone DKEY-183M22 in linkage group 6,
             complete sequence
          Length = 192136

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agattaaatttacatgattg 194
             ||||||||||||||||||||
Sbjct: 14915 agattaaatttacatgattg 14934



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>emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on chromosome 9 Contains a
              novel gene, complete sequence
          Length = 169430

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 205    gacaagcagtacctggaagcaaga 228
              |||||||||||| |||||||||||
Sbjct: 167906 gacaagcagtacatggaagcaaga 167883



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>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 171251

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 205   gacaagcagtacctggaagcaaga 228
             |||||||||||| |||||||||||
Sbjct: 74002 gacaagcagtacatggaagcaaga 73979



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>emb|AL845311.9| Human DNA sequence from clone RP11-402N8 on chromosome 9 Contains a novel
              gene and a CpG island, complete sequence
          Length = 148407

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 205    gacaagcagtacctggaagcaaga 228
              |||||||||||| |||||||||||
Sbjct: 143428 gacaagcagtacatggaagcaaga 143405



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>emb|AL354874.14| Human DNA sequence from clone RP11-38P6 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 88826

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   gacaagcagtacctggaagcaaga 228
             |||||||||||| |||||||||||
Sbjct: 27333 gacaagcagtacatggaagcaaga 27356



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>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3'
              end of novel protein similar to contactin associated
              protein-like 3 (CNTNAP3) and a pseudogene similar to part
              of vomeronasal 2 family, complete sequence
          Length = 208233

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 205    gacaagcagtacctggaagcaaga 228
              |||||||||||| |||||||||||
Sbjct: 189865 gacaagcagtacatggaagcaaga 189888



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>gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, complete sequence
          Length = 170940

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    actgggctgaaggggtggcaggga 46
             |||||||||||||||||| |||||
Sbjct: 83762 actgggctgaaggggtgggaggga 83739



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>gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, complete sequence
          Length = 181694

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 23     actgggctgaaggggtggcaggga 46
              |||||||||||||||||| |||||
Sbjct: 136974 actgggctgaaggggtgggaggga 136951



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>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence
          Length = 226170

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    acctggaagcaagaatctat 234
              ||||||||||||||||||||
Sbjct: 224322 acctggaagcaagaatctat 224303



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>emb|CR626925.1| Human DNA sequence from clone XX-NCIH2171_3N23, complete sequence
          Length = 122867

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gcaatgtgggtggaaattat 92
             ||||||||||||||||||||
Sbjct: 69550 gcaatgtgggtggaaattat 69569



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>emb|CR626893.1| Human DNA sequence from clone XX-NCIH2171_14M18, complete sequence
          Length = 113428

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gcaatgtgggtggaaattat 92
             ||||||||||||||||||||
Sbjct: 44353 gcaatgtgggtggaaattat 44334



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>gb|AF334829.1| Homo sapiens mitochondrial RNA-processing endoribonuclease RNA (RMRP)
             gene, complete sequence
          Length = 187856

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   aatgtctaagtaaagctgga 262
             ||||||||||||||||||||
Sbjct: 61226 aatgtctaagtaaagctgga 61207



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>gb|AC109494.3| Homo sapiens chromosome 5 clone RP11-783J1, complete sequence
          Length = 172180

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    tgtgacttaacaattctctaagcc 131
              ||||||||||| ||||||||||||
Sbjct: 125612 tgtgacttaactattctctaagcc 125635



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>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence
          Length = 180302

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 163    aaaacaatgtacagattaaattta 186
              ||||||||||||||||| ||||||
Sbjct: 114439 aaaacaatgtacagattcaattta 114416



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>gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, complete sequence
          Length = 198958

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     gcaatgtgggtggaaattat 92
              ||||||||||||||||||||
Sbjct: 131485 gcaatgtgggtggaaattat 131466



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>gb|AC008842.6| Homo sapiens chromosome 5 clone CTD-2155H8, complete sequence
          Length = 125238

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 108  tgtgacttaacaattctctaagcc 131
            ||||||||||| ||||||||||||
Sbjct: 8130 tgtgacttaactattctctaagcc 8153



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 101      acaacattgtgacttaacaa 120
                ||||||||||||||||||||
Sbjct: 27331348 acaacattgtgacttaacaa 27331329



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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   attaatgtctaagtaaagct 259
             ||||||||||||||||||||
Sbjct: 64379 attaatgtctaagtaaagct 64360



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>gb|AC010165.10|AC010165 Homo sapiens chromosome 5 clone RP11-17J3, complete sequence
          Length = 168909

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    tgtgacttaacaattctctaagcc 131
              ||||||||||| ||||||||||||
Sbjct: 104688 tgtgacttaactattctctaagcc 104665



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>gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308C24 and RP11-757H14 map 14q31,
             complete sequence
          Length = 232309

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   tacagattaaatttacatga 191
             ||||||||||||||||||||
Sbjct: 80681 tacagattaaatttacatga 80662



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>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0014E08
          Length = 144219

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   acaacattgtgacttaacaa 120
             ||||||||||||||||||||
Sbjct: 14243 acaacattgtgacttaacaa 14224



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>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0063G05
          Length = 182681

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    acaacattgtgacttaacaa 120
              ||||||||||||||||||||
Sbjct: 111865 acaacattgtgacttaacaa 111846



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>emb|BX072582.6| Zebrafish DNA sequence from clone DKEY-222O19 in linkage group 11,
             complete sequence
          Length = 194918

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cagaagcaaaacaatgtaca 175
             ||||||||||||||||||||
Sbjct: 78068 cagaagcaaaacaatgtaca 78087



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>gb|AY919043.1| Homo sapiens truncated REV1-like (yeast) (REV1L) gene, complete cds
          Length = 93047

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   attaatgtctaagtaaagct 259
             ||||||||||||||||||||
Sbjct: 57462 attaatgtctaagtaaagct 57481



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>emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chromosome 9p13.1-13.3
             Contains the 3' end of the CA9 gene for carbonic anhydrase
             IX (MN), the TPM2 gene for tropomyosin 2 (beta) (DA1,
             TMSB, AMCD1), the TLN1 gene for talin 1 (TLN, KIAA1027),
             the CREB3 gene for cAMP responsive element binding protein
             3 (luman) (LZIP, LUMAN, MGC15333, MGC19782), the GBA2 gene
             for glucosidase, beta (bile acid) 2 (AD035, KIAA1605,
             MGC16895, DKFZp762K054), a novel gene (KIAA0258), five
             novel genes, the NPR2 gene for natriuretic peptide
             receptor B/guanylate cyclase B (atrionatriuretic peptide
             receptor B) (NPRB, ANPRB, GUC2B, NPRBi), the SPAG8 gene
             for sperm associated antigen 8 (SMP1, BS-84, HSD-1,
             hSMP-1, MGC26201), the HINT2 gene for Histidine triad
             nucleotide binding protein 2, the gene for NAG-5 protein
             (LOC51754), an olfactory receptor pseudogene, the gene for
             a novel seven transmembrane helix receptor, a NADH
             dehydrogenase (ubiquinone) 1 alpha subcomplex, 5,13kDa
             (B13, NUFM, UQOR13, FLJ12147, CI-13KD-B) (NDUFA5)
             pseudogene and six CpG islands, complete sequence
          Length = 195379

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   aatgtctaagtaaagctgga 262
             ||||||||||||||||||||
Sbjct: 50110 aatgtctaagtaaagctgga 50129



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>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence
          Length = 209934

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 151   catctcagaagcaaaacaatgtacagattaaa 182
             |||||||||||||||| |||||| ||| ||||
Sbjct: 59088 catctcagaagcaaaataatgtaaagactaaa 59119



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>gb|AC005952.2| Homo sapiens chromosome 19, cosmid F19847, complete sequence
          Length = 15976

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  acctggaagcaagaatctat 234
            ||||||||||||||||||||
Sbjct: 6750 acctggaagcaagaatctat 6731



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>emb|AL808015.4| Mouse DNA sequence from clone RP23-467C11 on chromosome X, complete
             sequence
          Length = 180935

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   taacattaactcaaacatgt 288
             ||||||||||||||||||||
Sbjct: 77876 taacattaactcaaacatgt 77857



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>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete
             sequence
          Length = 153214

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   gacaagcagtacctggaagcaaga 228
             |||||||||||| |||||||||||
Sbjct: 91696 gacaagcagtacatggaagcaaga 91719


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,398,925
Number of Sequences: 3902068
Number of extensions: 3398925
Number of successful extensions: 84291
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84144
Number of HSP's gapped (non-prelim): 147
length of query: 353
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 331
effective length of database: 17,147,199,772
effective search space: 5675723124532
effective search space used: 5675723124532
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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