ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotrans... 31 1.4
2ACM2_RAT (P10980) Muscarinic acetylcholine receptor M2 29 5.1
3ACM2_PIG (P06199) Muscarinic acetylcholine receptor M2 29 5.1
4ACM2_MOUSE (Q9ERZ4) Muscarinic acetylcholine receptor M2 29 5.1
5ACM2_HUMAN (P08172) Muscarinic acetylcholine receptor M2 29 5.1
6ACM2_PANTR (Q9N2A7) Muscarinic acetylcholine receptor M2 (Fragment) 29 5.1
7MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-... 29 5.1
8PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-) 28 6.7
9AMYG_NEUCR (P14804) Glucoamylase precursor (EC 3.2.1.3) (Glucan ... 28 8.8

>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 634

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 282 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 157
           CN  +S LV   D     TH+G  +GV    SF  +L+C+ +
Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427



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>ACM2_RAT (P10980) Muscarinic acetylcholine receptor M2|
          Length = 466

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 95  MFSLFCGPALVNFLWSLRQQLCHIKSCV 12
           + + FC P + N +W++   LC+I S +
Sbjct: 408 LINTFCAPCIPNTVWTIGYWLCYINSTI 435



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>ACM2_PIG (P06199) Muscarinic acetylcholine receptor M2|
          Length = 466

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 95  MFSLFCGPALVNFLWSLRQQLCHIKSCV 12
           + + FC P + N +W++   LC+I S +
Sbjct: 408 LINTFCAPCIPNTVWTIGYWLCYINSTI 435



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>ACM2_MOUSE (Q9ERZ4) Muscarinic acetylcholine receptor M2|
          Length = 466

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 95  MFSLFCGPALVNFLWSLRQQLCHIKSCV 12
           + + FC P + N +W++   LC+I S +
Sbjct: 408 LINTFCAPCIPNTVWTIGYWLCYINSTI 435



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>ACM2_HUMAN (P08172) Muscarinic acetylcholine receptor M2|
          Length = 466

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 95  MFSLFCGPALVNFLWSLRQQLCHIKSCV 12
           + + FC P + N +W++   LC+I S +
Sbjct: 408 LINTFCAPCIPNTVWTIGYWLCYINSTI 435



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>ACM2_PANTR (Q9N2A7) Muscarinic acetylcholine receptor M2 (Fragment)|
          Length = 440

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 95  MFSLFCGPALVNFLWSLRQQLCHIKSCV 12
           + + FC P + N +W++   LC+I S +
Sbjct: 382 LINTFCAPCIPNTVWTIGYWLCYINSTI 409



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>MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 491

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
 Frame = +1

Query: 139 NFQYTLDTYTNKLKVKRHHQFNSYMSTRVGTSGMPVHSGNQTRLQLVTA---LVDGIKMF 309
           ++ +T++ Y N   +      NSY ++    + +        R+Q  TA   +  GIK  
Sbjct: 205 DYHHTMEEYANAKSLLFAQLGNSYHTSNPKIAVLNADDAESVRMQKATAAHIITFGIKQE 264

Query: 310 LDEPPANAEV*EHSEGSSVTT---TFTSEHAMLGN 405
            D   +N ++  H     + T    FT +  M+GN
Sbjct: 265 ADFQASNIKITSHGSTFDLGTPVGNFTLKIKMIGN 299



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>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)|
          Length = 758

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 125 SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 217
           SSK  + S+HL H+  +  S +T +   TCP
Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175



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>AMYG_NEUCR (P14804) Glucoamylase precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase)
          Length = 626

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 139 YIFRTDTALSFTSTVCLAFFVDLRSLIFCGVYVSSCATLKVV 14
           Y+++   +++ TST  LAFF DL   +  G Y SS +T   +
Sbjct: 368 YVWKKQGSITVTST-SLAFFKDLVPSVSTGTYSSSSSTYTAI 408


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,897,888
Number of Sequences: 219361
Number of extensions: 1356829
Number of successful extensions: 3490
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3490
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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