ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10... 30 1.1
2SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosi... 29 3.1
3MRP_STRSU (P32653) Muramidase-released protein precursor (136 kD... 29 3.1
4TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42 29 3.1
5SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosi... 28 4.1
6INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR... 28 5.3
7TENS1_HUMAN (Q9HBL0) Tensin-1 28 6.9
8OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1 28 6.9
9PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit... 28 6.9
10PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit... 28 6.9
11LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol... 28 6.9
12IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha) (... 27 9.0
13IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)... 27 9.0
14KPRS_LEPIN (Q8EZN0) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 27 9.0
15KPRS_LEPIC (Q72V73) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 27 9.0
16AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC ... 27 9.0
17Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c 27 9.0
18TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42 27 9.0
19PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb) 27 9.0

>YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10 intergenic|
           region
          Length = 518

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -3

Query: 332 RVEKDQPSQDGNEVEERNDGGLLNCRRSRRGKQSTKLRDLTSLYN*QKHLEHRMWSQGCC 153
           +++ ++P  D NE+ E  DG +  C    R K    LR L       +H  +R++S   C
Sbjct: 402 QLKSNKPLLDLNEIRENFDGSMFEC--ELRLKDHPILRKLVFNEEDYRHRGNRLYSFKTC 459

Query: 152 PVKK 141
            +K+
Sbjct: 460 TIKR 463



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>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -2

Query: 237 AKHEAEGL--DEPLQLTEAFGASYVVARLLSSEEMTQEWKKEASGCILWCMRTLNVILWD 64
           A +E  GL  +E  Q T  F     +   L + EMT  W       I+WC +T N I WD
Sbjct: 374 ANNENVGLWSEERKQNTRKF-----IEAQLDAFEMTGGW-------IMWCYKTENSIEWD 421

Query: 63  A*NVVQ 46
              ++Q
Sbjct: 422 VEKLIQ 427



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>MRP_STRSU (P32653) Muramidase-released protein precursor (136 kDa surface|
           protein)
          Length = 1256

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +2

Query: 71  KITFRVLIHHKMQPEAS--FFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSAS 229
           + T  VL  + ++P  S  F H   +++ +SN+  TYD   AS N  G+   SA+
Sbjct: 292 RTTGDVLEKYTIEPGESVTFSHPTKVNANNSNITVTYDTSLASANTPGALKFSAN 346



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>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/66 (27%), Positives = 26/66 (39%)
 Frame = +1

Query: 4   SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 183
           S +T+++       +D +  IP N    SH   +           H F    PC+H  C 
Sbjct: 114 SSKTALRTGSSDTQVDEVKSIPAN----SHLVNHLNCPMCSRLRLHSF--MLPCNHSLCE 167

Query: 184 KCFCQL 201
           KC  QL
Sbjct: 168 KCLRQL 173



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>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 156 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 46
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220|
           antigen) [Contains: Insulin receptor alpha subunit;
           Insulin receptor beta subunit]
          Length = 1382

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
 Frame = +1

Query: 1   HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------CHFFTGQQP 162
           H  + S +  C Q V+ N  CIP+    S +T  N++     P L      CH   G++ 
Sbjct: 291 HKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVCHLLEGEKT 347

Query: 163 CDHI 174
            D +
Sbjct: 348 IDSV 351



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>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 89   LIHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 187
            L HH+M  P  + FH   +SS  S+ ATT  +P+
Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245



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>OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1|
          Length = 310

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 110 VAFCGV*EL*MLFCGMHEMLSRTSCGQFIWMDVLLL 3
           ++FCG  E+  +FC +  +L  T CG+    +VL++
Sbjct: 166 LSFCGTSEIDFIFCDLPPLLKLT-CGESYTQEVLII 200



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>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58)
          Length = 534

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 79  IQSSHTPQNATRSFLLPFL 135
           +Q   T  NATR FLLPFL
Sbjct: 117 VQGFFTSNNATRDFLLPFL 135



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>PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58) (Transplantation antigen P91A) (Tum-P91A antigen)
          Length = 530

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 11/45 (24%)
 Frame = +1

Query: 34  PQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPFL 135
           P+ VL  +  +P  + + +H           T  NATR FLLPFL
Sbjct: 87  PRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFL 131



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>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen|
           oxidoreductase) (Urishiol oxidase)
          Length = 591

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/78 (24%), Positives = 31/78 (39%)
 Frame = +2

Query: 59  HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSASCFA 238
           HA    T  V + + ++   +  H   I  L++NL    D  N    C    +  +  + 
Sbjct: 103 HAQWGDTISVTVTNNLKYNGTTIHWHGIRQLNTNLQ---DGVNGITECPIPPNGGSKTYT 159

Query: 239 FLVETYGSSANLHHFFPQ 292
           F+   YG+S    HF  Q
Sbjct: 160 FIAHQYGTSWYHSHFSAQ 177



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>IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha) (RL/IF-1)
          Length = 314

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 13  TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 159
           T IQ    QL L+N+  +P++  + S+  ++      LP+    F GQ+
Sbjct: 263 TRIQQQLGQLTLENLQTLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311



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>IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)|
           (IkappaBalpha) (IKB-alpha)
          Length = 314

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 13  TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 159
           T IQ    QL L+N+  +P++  + S+  ++      LP+    F GQ+
Sbjct: 263 TRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311



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>KPRS_LEPIN (Q8EZN0) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 312

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 388 RMNAEMIAQVKLMEKIQLPELKKINQAK 305
           R+N+   ++V L   I +PE KKIN+ K
Sbjct: 259 RINSTQFSEVVLANTIAIPESKKINKLK 286



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>KPRS_LEPIC (Q72V73) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 312

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 388 RMNAEMIAQVKLMEKIQLPELKKINQAK 305
           R+N+   ++V L   I +PE KKIN+ K
Sbjct: 259 RINSTQFSEVVLANTIAIPESKKINKLK 286



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>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)|
           (Transaminase A)
          Length = 417

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -2

Query: 189 AFGASYVVARLLSSEEMTQEWKKE 118
           A+GA  +VA+LL + E+T++W K+
Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322



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>Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c|
          Length = 226

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 61  CIPQNNIQSSHTPQNATRSFLLPFLC 138
           C+ Q  +Q+SH  +N    F+LP +C
Sbjct: 123 CVDQITMQNSHLDKNKFHLFILPGIC 148



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>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42|
          Length = 723

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +1

Query: 4   SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 183
           S +T++++      +D    +P     SSH   + T         H F    PC+H  C 
Sbjct: 114 SSKTALRVGSSDTQMDEPKTMPA----SSHLVSHLTCPMCNRLRLHSF--MLPCNHSLCE 167

Query: 184 KCFCQL 201
           KC  QL
Sbjct: 168 KCLRQL 173



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>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)|
          Length = 390

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 59  HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAP 184
           H  H  + R  I H     +SF H+  +   DSN +++ D P
Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,614,578
Number of Sequences: 219361
Number of extensions: 981030
Number of successful extensions: 3360
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3360
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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