Clone Name | rbastl25f05 |
---|---|
Clone Library Name | barley_pub |
>YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10 intergenic| region Length = 518 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/64 (28%), Positives = 31/64 (48%) Frame = -3 Query: 332 RVEKDQPSQDGNEVEERNDGGLLNCRRSRRGKQSTKLRDLTSLYN*QKHLEHRMWSQGCC 153 +++ ++P D NE+ E DG + C R K LR L +H +R++S C Sbjct: 402 QLKSNKPLLDLNEIRENFDGSMFEC--ELRLKDHPILRKLVFNEEDYRHRGNRLYSFKTC 459 Query: 152 PVKK 141 +K+ Sbjct: 460 TIKR 463
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -2 Query: 237 AKHEAEGL--DEPLQLTEAFGASYVVARLLSSEEMTQEWKKEASGCILWCMRTLNVILWD 64 A +E GL +E Q T F + L + EMT W I+WC +T N I WD Sbjct: 374 ANNENVGLWSEERKQNTRKF-----IEAQLDAFEMTGGW-------IMWCYKTENSIEWD 421 Query: 63 A*NVVQ 46 ++Q Sbjct: 422 VEKLIQ 427
>MRP_STRSU (P32653) Muramidase-released protein precursor (136 kDa surface| protein) Length = 1256 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +2 Query: 71 KITFRVLIHHKMQPEAS--FFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSAS 229 + T VL + ++P S F H +++ +SN+ TYD AS N G+ SA+ Sbjct: 292 RTTGDVLEKYTIEPGESVTFSHPTKVNANNSNITVTYDTSLASANTPGALKFSAN 346
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/66 (27%), Positives = 26/66 (39%) Frame = +1 Query: 4 SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 183 S +T+++ +D + IP N SH + H F PC+H C Sbjct: 114 SSKTALRTGSSDTQVDEVKSIPAN----SHLVNHLNCPMCSRLRLHSF--MLPCNHSLCE 167 Query: 184 KCFCQL 201 KC QL Sbjct: 168 KCLRQL 173
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 156 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 46 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Frame = +1 Query: 1 HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------CHFFTGQQP 162 H + S + C Q V+ N CIP+ S +T N++ P L CH G++ Sbjct: 291 HKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVCHLLEGEKT 347 Query: 163 CDHI 174 D + Sbjct: 348 IDSV 351
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +2 Query: 89 LIHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 187 L HH+M P + FH +SS S+ ATT +P+ Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245
>OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1| Length = 310 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 110 VAFCGV*EL*MLFCGMHEMLSRTSCGQFIWMDVLLL 3 ++FCG E+ +FC + +L T CG+ +VL++ Sbjct: 166 LSFCGTSEIDFIFCDLPPLLKLT-CGESYTQEVLII 200
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 Query: 79 IQSSHTPQNATRSFLLPFL 135 +Q T NATR FLLPFL Sbjct: 117 VQGFFTSNNATRDFLLPFL 135
>PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) (Transplantation antigen P91A) (Tum-P91A antigen) Length = 530 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 11/45 (24%) Frame = +1 Query: 34 PQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPFL 135 P+ VL + +P + + +H T NATR FLLPFL Sbjct: 87 PRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFL 131
>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) Length = 591 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/78 (24%), Positives = 31/78 (39%) Frame = +2 Query: 59 HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSASCFA 238 HA T V + + ++ + H I L++NL D N C + + + Sbjct: 103 HAQWGDTISVTVTNNLKYNGTTIHWHGIRQLNTNLQ---DGVNGITECPIPPNGGSKTYT 159 Query: 239 FLVETYGSSANLHHFFPQ 292 F+ YG+S HF Q Sbjct: 160 FIAHQYGTSWYHSHFSAQ 177
>IKBA_RAT (Q63746) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) (RL/IF-1) Length = 314 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 13 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 159 T IQ QL L+N+ +P++ + S+ ++ LP+ F GQ+ Sbjct: 263 TRIQQQLGQLTLENLQTLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311
>IKBA_MOUSE (Q9Z1E3) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) Length = 314 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 13 TSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQ 159 T IQ QL L+N+ +P++ + S+ ++ LP+ F GQ+ Sbjct: 263 TRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEDELPYDDCVFGGQR 311
>KPRS_LEPIN (Q8EZN0) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 312 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 388 RMNAEMIAQVKLMEKIQLPELKKINQAK 305 R+N+ ++V L I +PE KKIN+ K Sbjct: 259 RINSTQFSEVVLANTIAIPESKKINKLK 286
>KPRS_LEPIC (Q72V73) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 312 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 388 RMNAEMIAQVKLMEKIQLPELKKINQAK 305 R+N+ ++V L I +PE KKIN+ K Sbjct: 259 RINSTQFSEVVLANTIAIPESKKINKLK 286
>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 417 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = -2 Query: 189 AFGASYVVARLLSSEEMTQEWKKE 118 A+GA +VA+LL + E+T++W K+ Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322
>Y1217_CAMJE (Q9PN78) UPF0124 protein Cj1217c| Length = 226 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +1 Query: 61 CIPQNNIQSSHTPQNATRSFLLPFLC 138 C+ Q +Q+SH +N F+LP +C Sbjct: 123 CVDQITMQNSHLDKNKFHLFILPGIC 148
>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42| Length = 723 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/66 (27%), Positives = 27/66 (40%) Frame = +1 Query: 4 SKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFLCHFFTGQQPCDHIRCS 183 S +T++++ +D +P SSH + T H F PC+H C Sbjct: 114 SSKTALRVGSSDTQMDEPKTMPA----SSHLVSHLTCPMCNRLRLHSF--MLPCNHSLCE 167 Query: 184 KCFCQL 201 KC QL Sbjct: 168 KCLRQL 173
>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)| Length = 390 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +2 Query: 59 HASHKITFRVLIHHKMQPEASFFHSCVISSLDSNLATTYDAP 184 H H + R I H +SF H+ + DSN +++ D P Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,614,578 Number of Sequences: 219361 Number of extensions: 981030 Number of successful extensions: 3360 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3360 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)