ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL031656.10|HS232N11 Human DNA sequence from clone RP1-232N1... 44 0.34
2emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chrom... 44 0.34
3gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
4gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, comp... 42 1.3
5emb|BX537106.6| Zebrafish DNA sequence from clone DKEY-98P3 in l... 42 1.3
6emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene 42 1.3
7gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, comp... 42 1.3
8gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, com... 42 1.3
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
10emb|BX005104.7| Zebrafish DNA sequence from clone DKEY-191D13 in... 42 1.3
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
12gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, co... 42 1.3
13gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, comple... 42 1.3
14emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 42 1.3
15emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, ... 42 1.3
16gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, co... 42 1.3
17gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, co... 40 5.3
18gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 40 5.3
19gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosom... 40 5.3
20gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosom... 40 5.3
21gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 40 5.3
22gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, compl... 40 5.3
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.3
24ref|XM_975010.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.3
25ref|XM_974871.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.3
26ref|XM_973576.1| PREDICTED: Mus musculus hypothetical protein LO... 40 5.3
27emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chro... 40 5.3
28gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, c... 40 5.3
29gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosom... 40 5.3
30gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosom... 40 5.3
31gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosom... 40 5.3
32gb|AC133889.9| Mus musculus chromosome 16, clone RP23-380I13, co... 40 5.3
33ref|XM_758556.1| Theileria parva strain Muguga chromosome 4 hypo... 40 5.3
34emb|AL390035.10| Human DNA sequence from clone RP13-9D14 on chro... 40 5.3
35emb|AL390866.14| Human DNA sequence from clone RP11-218D6 on chr... 40 5.3
36gb|AY043452.1| Helicobacter pylori adhesin-binding fucosylated h... 40 5.3
37tpg|BK002895.1| TPA: TPA_inf: Drosophila melanogaster HDC16125 (... 40 5.3
38gb|AC108004.3| Homo sapiens chromosome 17, clone CTD-2348K1, com... 40 5.3
39dbj|AK148940.1| Mus musculus 2 days neonate sympathetic ganglion... 40 5.3
40gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
41dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
43gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, r... 40 5.3
44gb|AC092967.5| Homo sapiens 3 BAC RP11-521A24 (Roswell Park Canc... 40 5.3
45emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chr... 40 5.3
46emb|AL845360.10| Mouse DNA sequence from clone RP23-421L7 on chr... 40 5.3
47dbj|AP000412.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.3
48gb|AC155288.3| Mus musculus 6 BAC RP24-176C17 (Roswell Park Canc... 40 5.3
49gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 10... 40 5.3
50gb|AC074042.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.3
51emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chr... 40 5.3
52emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 40 5.3 
>emb|AL031656.10|HS232N11 Human DNA sequence from clone RP1-232N11 on chromosome 20q12-13.2
             Contains part of the PTPRT gene for protein tyrosine
             phosphatase receptor type T and a novel gene, complete
             sequence
          Length = 111641

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 271   cctccatcatttctttcctcaa 292
             ||||||||||||||||||||||
Sbjct: 71679 cctccatcatttctttcctcaa 71658
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>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete
             sequence
          Length = 207571

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 109   accagaagcttccttcttccat 130
             ||||||||||||||||||||||
Sbjct: 18688 accagaagcttccttcttccat 18667
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    ccacaaaataacattcagagt 87
             |||||||||||||||||||||
Sbjct: 85791 ccacaaaataacattcagagt 85811
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>gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, complete sequence
          Length = 133815

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    tccatccaaatgaattgtcca 36
             |||||||||||||||||||||
Sbjct: 50105 tccatccaaatgaattgtcca 50085
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>emb|BX537106.6| Zebrafish DNA sequence from clone DKEY-98P3 in linkage group 20 Contains
              the gene for a novel protein similar to vertebrate
              dermatopontin (DPT), the atp1b1a gene for ATPase, Na+/K+
              transporting, beta 1a polypeptide, the gene for a novel
              protein containing a homocysteine S-methyltransferase
              domain, the bivm gene for basic, immunoglobulin-like
              variable motif containing, the 5' end of the gene for a
              novel zinc finger protein (wu:fc06h02), the ndpkz4 gene for
              nucleoside diphosphate kinase-Z4 and the gene for a novel
              protein containing an inosine-uridine preferring nucleoside
              hydrolase doamin, complete sequence
          Length = 162005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     atgcatcccacaaaataacat 80
              |||||||||||||||||||||
Sbjct: 115020 atgcatcccacaaaataacat 115040
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>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     tccatccaaatgaattgtcca 36
              |||||||||||||||||||||
Sbjct: 203820 tccatccaaatgaattgtcca 203840
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>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     tccatccaaatgaattgtcca 36
              |||||||||||||||||||||
Sbjct: 179116 tccatccaaatgaattgtcca 179096
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>gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, complete sequence
          Length = 198967

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   cagaagcttccttcttccatt 131
             |||||||||||||||||||||
Sbjct: 19215 cagaagcttccttcttccatt 19235
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 67      ccacaaaataacattcagagt 87
               |||||||||||||||||||||
Sbjct: 3229194 ccacaaaataacattcagagt 3229174
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>emb|BX005104.7| Zebrafish DNA sequence from clone DKEY-191D13 in linkage group 6,
              complete sequence
          Length = 152217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     atgcatcccacaaaataacat 80
              |||||||||||||||||||||
Sbjct: 144255 atgcatcccacaaaataacat 144275
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 67      ccacaaaataacattcagagt 87
               |||||||||||||||||||||
Sbjct: 3237899 ccacaaaataacattcagagt 3237879
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>gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, complete sequence
          Length = 132960

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    tccatccaaatgaattgtcca 36
             |||||||||||||||||||||
Sbjct: 50104 tccatccaaatgaattgtcca 50084
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>gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, complete sequence
          Length = 120229

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     tccatccaaatgaattgtcca 36
              |||||||||||||||||||||
Sbjct: 118690 tccatccaaatgaattgtcca 118670
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    atgcatcccacaaaataacat 80
             |||||||||||||||||||||
Sbjct: 25972 atgcatcccacaaaataacat 25992
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>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence
          Length = 147111

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    atgcatcccacaaaataacat 80
             |||||||||||||||||||||
Sbjct: 17594 atgcatcccacaaaataacat 17614
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>gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, complete sequence
          Length = 203284

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   cagaagcttccttcttccatt 131
             |||||||||||||||||||||
Sbjct: 46662 cagaagcttccttcttccatt 46642
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>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence
          Length = 173479

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  cagaagcttccttcttccat 130
            ||||||||||||||||||||
Sbjct: 3481 cagaagcttccttcttccat 3462
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   ttggttgatctttttcaact 330
             ||||||||||||||||||||
Sbjct: 89309 ttggttgatctttttcaact 89290
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>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete
             sequence
          Length = 136832

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   cagaagcttccttcttccat 130
             ||||||||||||||||||||
Sbjct: 62510 cagaagcttccttcttccat 62529
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>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence
          Length = 209820

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    cagaagcttccttcttccat 130
              ||||||||||||||||||||
Sbjct: 154326 cagaagcttccttcttccat 154307
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence
          Length = 193184

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    cagaagcttccttcttccat 130
              ||||||||||||||||||||
Sbjct: 167982 cagaagcttccttcttccat 168001
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>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence
          Length = 250903

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    cagaagcttccttcttccat 130
              ||||||||||||||||||||
Sbjct: 109193 cagaagcttccttcttccat 109174
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 311      ttggttgatctttttcaact 330
                ||||||||||||||||||||
Sbjct: 32437181 ttggttgatctttttcaact 32437162



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 305     cttggcttggttgatctttttcaactcg 332
               |||||||||||||||| || ||||||||
Sbjct: 9025795 cttggcttggttgatcattgtcaactcg 9025768
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>ref|XM_975010.1| PREDICTED: Mus musculus hypothetical protein LOC669245 (LOC669245),
           mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 cagaagcttccttcttccat 130
           ||||||||||||||||||||
Sbjct: 136 cagaagcttccttcttccat 117
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>ref|XM_974871.1| PREDICTED: Mus musculus hypothetical protein LOC664925 (LOC664925),
           mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 cagaagcttccttcttccat 130
           ||||||||||||||||||||
Sbjct: 136 cagaagcttccttcttccat 117
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>ref|XM_973576.1| PREDICTED: Mus musculus hypothetical protein LOC674284 (LOC674284),
           mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 cagaagcttccttcttccat 130
           ||||||||||||||||||||
Sbjct: 136 cagaagcttccttcttccat 117
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>emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chromosome 17, complete
             sequence
          Length = 197841

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   cagaagcttccttcttccat 130
             ||||||||||||||||||||
Sbjct: 85983 cagaagcttccttcttccat 85964
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>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence
          Length = 194593

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    cagaagcttccttcttccat 130
              ||||||||||||||||||||
Sbjct: 188090 cagaagcttccttcttccat 188109
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>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete sequence
          Length = 154681

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    caaacctccatcatttcttt 286
              ||||||||||||||||||||
Sbjct: 132599 caaacctccatcatttcttt 132580
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>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete
             sequence
          Length = 170250

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   cagaagcttccttcttccat 130
             ||||||||||||||||||||
Sbjct: 17379 cagaagcttccttcttccat 17398
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>gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosome 12, complete
             sequence
          Length = 171251

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   caaacctccatcatttcttt 286
             ||||||||||||||||||||
Sbjct: 52696 caaacctccatcatttcttt 52715
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>gb|AC133889.9| Mus musculus chromosome 16, clone RP23-380I13, complete sequence
          Length = 235574

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   cagaagcttccttcttccat 130
             ||||||||||||||||||||
Sbjct: 55849 cagaagcttccttcttccat 55868
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>ref|XM_758556.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
            (TP04_0014) partial mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  aatcttctccatcagcttca 360
            ||||||||||||||||||||
Sbjct: 1498 aatcttctccatcagcttca 1479
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>emb|AL390035.10| Human DNA sequence from clone RP13-9D14 on chromosome X Contains the 5'
              end of gene KIAA2022 and a CpG island, complete sequence
          Length = 148057

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    caaaatgcaaccagaagctt 119
              ||||||||||||||||||||
Sbjct: 108064 caaaatgcaaccagaagctt 108083
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>emb|AL390866.14| Human DNA sequence from clone RP11-218D6 on chromosome 10 Contains the 5'
              end of the gene for a novel protein
              (FLJ10817)(DKFZP434P1735), a ribosomal protein L36a-like
              (RPL36AL)(RPL36A) pseudogene, a mitochondrial ribosomal
              protein S21 (MRPS21)(MDS016, RPMS21, MRP-S21) pseudogene, a
              novel gene, the 3' end of the gene for a novel protein
              (FLJ32798) and a CpG island, complete sequence
          Length = 206198

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    catcatttctttcctcaacc 294
              ||||||||||||||||||||
Sbjct: 166063 catcatttctttcctcaacc 166044
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>gb|AY043452.1| Helicobacter pylori adhesin-binding fucosylated histo-blood group
           antigen (babB) gene, babB-AD4 allele, partial cds
          Length = 2201

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 ggcttggttgatctttttca 327
           ||||||||||||||||||||
Sbjct: 537 ggcttggttgatctttttca 518
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>tpg|BK002895.1| TPA: TPA_inf: Drosophila melanogaster HDC16125 (HDC16125) gene,
            complete cds
          Length = 3028

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 331  cgggtagttgaatcttctcc 350
            ||||||||||||||||||||
Sbjct: 2998 cgggtagttgaatcttctcc 2979
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>gb|AC108004.3| Homo sapiens chromosome 17, clone CTD-2348K1, complete sequence
          Length = 116762

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   attcttgtgtcatttcttca 148
             ||||||||||||||||||||
Sbjct: 60550 attcttgtgtcatttcttca 60569
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>dbj|AK148940.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120465J07
            product:unclassifiable, full insert sequence
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  cagaagcttccttcttccat 130
            ||||||||||||||||||||
Sbjct: 1929 cagaagcttccttcttccat 1948
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 305   cttggcttggttgatctttttcaactcg 332
             |||||||||||||||| || ||||||||
Sbjct: 32831 cttggcttggttgatcattgtcaactcg 32804
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 340      gaatcttctccatcagcttc 359
                ||||||||||||||||||||
Sbjct: 19662774 gaatcttctccatcagcttc 19662793
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 311      ttggttgatctttttcaact 330
                ||||||||||||||||||||
Sbjct: 32527691 ttggttgatctttttcaact 32527672



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 305     cttggcttggttgatctttttcaactcg 332
               |||||||||||||||| || ||||||||
Sbjct: 9023628 cttggcttggttgatcattgtcaactcg 9023601
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>gb|AC007854.4|AC007854 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone
              BACR13H19, complete sequence
          Length = 155666

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    cgggtagttgaatcttctcc 350
              ||||||||||||||||||||
Sbjct: 114029 cgggtagttgaatcttctcc 114010
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>gb|AC092967.5| Homo sapiens 3 BAC RP11-521A24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179848

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   cctccatcatttctttcctcaacc 294
             ||||||||||||||| ||||||||
Sbjct: 68978 cctccatcatttcttgcctcaacc 69001
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>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete
             sequence
          Length = 145244

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   cagaagcttccttcttccat 130
             ||||||||||||||||||||
Sbjct: 14659 cagaagcttccttcttccat 14640
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>emb|AL845360.10| Mouse DNA sequence from clone RP23-421L7 on chromosome 2, complete
              sequence
          Length = 196651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    cagaagcttccttcttccat 130
              ||||||||||||||||||||
Sbjct: 113584 cagaagcttccttcttccat 113603
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>dbj|AP000412.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K3G3
          Length = 24057

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  aaccagaagcttccttcttc 127
            ||||||||||||||||||||
Sbjct: 2599 aaccagaagcttccttcttc 2618
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>gb|AC155288.3| Mus musculus 6 BAC RP24-176C17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 168486

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   atcatttctttcctcaacct 295
             ||||||||||||||||||||
Sbjct: 62715 atcatttctttcctcaacct 62734
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>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete
              sequence
          Length = 231562

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    cgggtagttgaatcttctcc 350
              ||||||||||||||||||||
Sbjct: 161299 cgggtagttgaatcttctcc 161280
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>gb|AC074042.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-99G18, complete
              sequence
          Length = 226048

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    tgaatcttctccatcagctt 358
              ||||||||||||||||||||
Sbjct: 100399 tgaatcttctccatcagctt 100418
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>emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chromosome 4, complete
             sequence
          Length = 164883

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   cagaagcttccttcttccat 130
             ||||||||||||||||||||
Sbjct: 80777 cagaagcttccttcttccat 80796
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>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
              complete sequence
          Length = 166410

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    gaatcttctccatcagcttc 359
              ||||||||||||||||||||
Sbjct: 113500 gaatcttctccatcagcttc 113519


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,329,144
Number of Sequences: 3902068
Number of extensions: 4329144
Number of successful extensions: 89225
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88949
Number of HSP's gapped (non-prelim): 276
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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