ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CMTA5_ARATH (O23463) Calmodulin-binding transcription activator ... 63 4e-10
2CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator ... 57 2e-08
3CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator ... 32 0.95
4CCD41_MOUSE (Q9D5R3) Coiled-coil domain-containing protein 41 28 8.1
5M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kina... 28 8.1
6M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kina... 28 8.1

>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5|
            (Signal-responsive protein 6) (Ethylene-induced
            calmodulin-binding protein f) (EICBP.f)
          Length = 923

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 28/48 (58%), Positives = 40/48 (83%)
 Frame = -3

Query: 444  SRQQAEDRFNRSVVRVQALFRCHRAQHEYRRMRIAHEEAKLEFSKEQQ 301
            S++QAE+R  RSVV+VQA+FR  +AQ +YRRM++AHEEA+LE+   Q+
Sbjct: 867  SQKQAEERLERSVVKVQAMFRSKKAQQDYRRMKLAHEEAQLEYDGMQE 914



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>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6|
           (Signal-responsive protein 3) (Ethylene-induced
           calmodulin-binding protein e) (EICBP.e)
           (Ethylene-induced calmodulin-binding protein 5) (EICBP5)
          Length = 838

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = -3

Query: 444 SRQQAEDRFNRSVVRVQALFRCHRAQHEYRRMRIAHEEAKL 322
           S++QAE+R  RSVVRVQA+FR  +AQ +YRRM++ HEEA++
Sbjct: 780 SQRQAEERLERSVVRVQAMFRSKKAQQDYRRMKLTHEEAQV 820



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>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3|
            (Signal-responsive protein 1) (Ethylene-induced
            calmodulin-binding protein a) (EICBP.a) (Ethylene-induced
            calmodulin-binding protein 1) (EICBP1)
          Length = 1032

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 16/52 (30%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
 Frame = -3

Query: 441  RQQAEDRFNRSVVRVQALFRCHRAQHEYRR-MRIAH--EEAKLEFSKEQQQA 295
            R+Q EDR  +++ RV+++ +   A+ +YRR + + +  +E+K+E + E  +A
Sbjct: 948  RKQTEDRLQKALARVKSMVQYPEARDQYRRLLNVVNDIQESKVEKALENSEA 999



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>CCD41_MOUSE (Q9D5R3) Coiled-coil domain-containing protein 41|
          Length = 692

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -3

Query: 444 SRQQAEDRFNRSVVRVQALFRCHRAQHEYRRMRIAHEEAKLEFSKEQQQ 298
           SR   E  F   ++  +   RC   +H Y+ ++I H+  + E+ K Q +
Sbjct: 14  SRLNPEPEFQNMLIDERV--RCEHHKHNYQALKIEHKRLQEEYVKSQNE 60



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>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1239

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -3

Query: 441 RQQAEDRFNRSVVRVQALFRCH--RAQHEYRRMRIAHEEAKLEFSKEQQQ 298
           R Q E++     +R Q L +    R Q EY+R  +A  + ++E  KEQ++
Sbjct: 358 RLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRR 407



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>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1233

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -3

Query: 441 RQQAEDRFNRSVVRVQALFRCH--RAQHEYRRMRIAHEEAKLEFSKEQQQ 298
           R Q E++     +R Q L +    R Q EY+R  +A  + ++E  KEQ++
Sbjct: 357 RLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRR 406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,190,506
Number of Sequences: 219361
Number of extensions: 994140
Number of successful extensions: 2070
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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