>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +1

Query: 124  LHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSLHLLCSLATYNLVNEVPENGPLNV 300
            L  L+A +  G D Q+  +  T   Q P+  P  SLH +  LA  N  N     GP+ V
Sbjct: 959  LEALLAAVKTGQDLQKLVTPETPLVQYPSLAPWLSLHSI--LARINECNRCHHEGPVTV 1015

>CAD13_CHICK (P33150) Cadherin-13 precursor (Truncated-cadherin) (T-cadherin)|
           (T-cad)
          Length = 712

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 167 NSHIQFILLKDSCLRNFHCPACIFSVASPPITSSMR-SLKMDPSMSKTMPCS 319
           N+H Q +LL++    N++ P  +     PP+T++    L++       M CS
Sbjct: 639 NTHAQVVLLQNLKKANYNIPISVTDSGKPPLTNNTELKLQVCSCKKSRMDCS 690

>Y676_MYCPN (P75116) Hypothetical protein MPN676 (K05_orf106)|
          Length = 106

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = +1

Query: 85  FYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSLHLLCSLAT 255
           +Y+      +++   ++ +K+P+GN  Q  ++  T+   L   + LS  HLL  + T
Sbjct: 46  YYVFGFFTFRWQRSLIITSKVPSGNGIQFDFNSRTSHWLLNFLYSLSEYHLLFKVKT 102

>PCDBF_HUMAN (Q9Y5E8) Protocadherin beta 15 precursor (PCDH-beta15)|
          Length = 787

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +1

Query: 58  PEFQE*LYFFYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSL 231
           PEF + LY   + ++S      + +    +  G + + SYS+Y + +++   F LSSL
Sbjct: 240 PEFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSL 297

>DHB1_RAT (P51657) Estradiol 17-beta-dehydrogenase 1 (EC 1.1.1.62)|
           (17-beta-HSD 1) (17-beta-hydroxysteroid dehydrogenase 1)
          Length = 344

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 121 GLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPL 222
           GLHL V      +D  QS+ VY T R L +Q PL
Sbjct: 16  GLHLAVRL---ASDRSQSFKVYATLRDLKSQGPL 46

>PCDBF_PANTR (Q5DRD3) Protocadherin beta 15 precursor (PCDH-beta15)|
          Length = 787

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 58  PEFQE*LYFFYIIQSSEKKYKGLHLLVAKIPNGNDYQQSYSVYTTERQLPTQFPLSSL 231
           PEF + LY   + ++S      + +    +  G + + SYS+Y +  ++   F LSSL
Sbjct: 240 PEFAQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSEEINKPFELSSL 297


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,567,239
Number of Sequences: 219361
Number of extensions: 689136
Number of successful extensions: 2000
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2000
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)