ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA 170 2e-39
2dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
3dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 123 5e-25
5gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom... 123 5e-25
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
7gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 123 5e-25
8gb|AY109108.1| Zea mays PCO116815 mRNA sequence 121 2e-24
9gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence 113 5e-22
10gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
11dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
12gb|AY112223.1| Zea mays CL3071_1 mRNA sequence 74 4e-10
13gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
14gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
17ref|NM_197253.1| Oryza sativa (japonica cultivar-group) putative... 58 3e-05
18gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 46 0.098
19gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 44 0.39
20gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 42 1.5
21ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING fin... 42 1.5
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25emb|AL845536.8| Mouse DNA sequence from clone RP23-311G5 on chro... 42 1.5
26emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch... 42 1.5
27gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 6.1
28ref|XM_543770.2| PREDICTED: Canis familiaris similar to solute c... 40 6.1
29gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosom... 40 6.1
30emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, comp... 40 6.1
31gb|AC162800.2| Mus musculus BAC clone RP24-173D2 from chromosome... 40 6.1
32emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chr... 40 6.1
33emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chro... 40 6.1
34emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chr... 40 6.1
35gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, comp... 40 6.1
36gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, comple... 40 6.1
37ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ... 40 6.1
38gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel... 40 6.1
39gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp... 40 6.1
40gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosom... 40 6.1
41gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co... 40 6.1
42gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 40 6.1
43gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 6.1
44ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 6.1
45gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA 40 6.1
46emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-3... 40 6.1
47gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete... 40 6.1
48gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 6.1
49gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 6.1
50gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm... 40 6.1
51emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro... 40 6.1
52gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park C... 40 6.1 
>ref|XM_469360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score =  170 bits (86), Expect = 2e-39
 Identities = 204/242 (84%), Gaps = 1/242 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3092 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3033

                                                                        
Query: 270  gcttccatcttctgagacagggcatgctgtaacttttggatttcatccctctttttcctt 329
            |||||||| ||||| ||||| || || || | |||||| ||||| || ||||||||||| 
Sbjct: 3032 gcttccattttctgtgacagtgcgtgttggagcttttgaatttcttctctctttttcctc 2973

                                                                        
Query: 330  agcttttcgagctccacttccgcatttagagccccttgaagctgaaggtatacggatagg 389
            |||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||||| || |  
Sbjct: 2972 agcttttcaagctcaacttctgcattgagagctccttggagttgaaggtatacagacaaa 2913

                                                                        
Query: 390  tctttgtttacaacagcagttgaacagtcaggtggagttt-atcactctctgccaggatc 448
            ||||||||||||||||| |||| |||||||||||| |||| |||| |||||| |||||||
Sbjct: 2912 tctttgtttacaacagctgttgcacagtcaggtggcgtttcatcattctctgtcaggatc 2853

              
Query: 449  tt 450
            ||
Sbjct: 2852 tt 2851
to top
>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full
            insert sequence
          Length = 3587

 Score =  170 bits (86), Expect = 2e-39
 Identities = 204/242 (84%), Gaps = 1/242 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3304 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3245

                                                                        
Query: 270  gcttccatcttctgagacagggcatgctgtaacttttggatttcatccctctttttcctt 329
            |||||||| ||||| ||||| || || || | |||||| ||||| || ||||||||||| 
Sbjct: 3244 gcttccattttctgtgacagtgcgtgttggagcttttgaatttcttctctctttttcctc 3185

                                                                        
Query: 330  agcttttcgagctccacttccgcatttagagccccttgaagctgaaggtatacggatagg 389
            |||||||| ||||| ||||| ||||| ||||| ||||| || ||||||||||| || |  
Sbjct: 3184 agcttttcaagctcaacttctgcattgagagctccttggagttgaaggtatacagacaaa 3125

                                                                        
Query: 390  tctttgtttacaacagcagttgaacagtcaggtggagttt-atcactctctgccaggatc 448
            ||||||||||||||||| |||| |||||||||||| |||| |||| |||||| |||||||
Sbjct: 3124 tctttgtttacaacagctgttgcacagtcaggtggcgtttcatcattctctgtcaggatc 3065

              
Query: 449  tt 450
            ||
Sbjct: 3064 tt 3063
to top
>dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D01, full
            insert sequence
          Length = 4411

 Score =  147 bits (74), Expect = 4e-32
 Identities = 175/206 (84%), Gaps = 2/206 (0%)
 Strand = Plus / Minus

                                                                        
Query: 246  ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatgctgtaacttt 305
            |||||||||||| | |||||||| |||||||| ||||| || |||||||| || | ||||
Sbjct: 4113 ggagccttctctttataaccggaagcttccattttctgtgatagggcatgttgcagcttt 4054

                                                                        
Query: 306  tggatttcatccctctttttccttagcttttcgagctccacttccgcatttagagcccct 365
            || ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||| |||
Sbjct: 4053 tgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagagctcct 3994

                                                                        
Query: 366  tgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcaggtgga 425
            || || || |||||||| ||||   ||||||| |||||||| |||| |||||||||||| 
Sbjct: 3993 tggagttggaggtatacagata-aactttgttcacaacagctgttgcacagtcaggtggt 3935

                                      
Query: 426  gttt-atcactctctgccaggatctt 450
            |||| ||||||||||  |||||||||
Sbjct: 3934 gtttcatcactctctatcaggatctt 3909
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  123 bits (62), Expect = 5e-25
 Identities = 129/150 (86%), Gaps = 1/150 (0%)
 Strand = Plus / Minus

                                                                            
Query: 301      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
                ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 27542546 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 27542487

                                                                            
Query: 361      ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
                | ||||| || ||||||||||| || |  ||||||||||||||||| |||| ||||||||
Sbjct: 27542486 ctccttggagttgaaggtatacagacaaatctttgtttacaacagctgttgcacagtcag 27542427

                                              
Query: 421      gtggagttt-atcactctctgccaggatct 449
                |||| |||| |||| |||||| ||||||||
Sbjct: 27542426 gtggcgtttcatcattctctgtcaggatct 27542397



 Score =  107 bits (54), Expect = 3e-20
 Identities = 128/150 (85%), Gaps = 2/150 (1%)
 Strand = Plus / Minus

                                                                          
Query: 301    acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
              ||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 651915 acttttgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagag 651856

                                                                          
Query: 361    ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
              | ||||| || || |||||||| ||||   ||||||| |||||||| |||| ||||||||
Sbjct: 651855 ctccttggagttggaggtatacagata-aactttgttcacaacagctgttgcacagtcag 651797

                                            
Query: 421    gtggagttt-atcactctctgccaggatct 449
              |||| |||| ||||||||||  ||||||||
Sbjct: 651796 gtggtgtttcatcactctctatcaggatct 651767



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 122/150 (81%), Gaps = 1/150 (0%)
 Strand = Plus / Plus

                                                                            
Query: 301      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
                ||||||||||| |||| ||||| ||||||||||||||  ||||  | || |||||||  |
Sbjct: 12395975 acttttggattccatctctcttcttccttagcttttcacgctcagcctctgcatttatgg 12396034

                                                                            
Query: 361      ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
                | |||||||||| |||||| || || |  |||||||| ||||||||  ||| ||| ||||
Sbjct: 12396035 ctccttgaagcttaaggtacaccgacaaatctttgttaacaacagcgattgcacaatcag 12396094

                                              
Query: 421      gtggagttt-atcactctctgccaggatct 449
                 ||||||||  ||| |||||| ||||||||
Sbjct: 12396095 ctggagtttcgtcattctctgtcaggatct 12396124



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 210      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27542742 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27542683

                                    
Query: 270      gcttccatcttctgagacag 289
                |||||||| ||||| |||||
Sbjct: 27542682 gcttccattttctgtgacag 27542663



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 246    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652074 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652025



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 156      gcatctagtttcttctcagcctcac 180
                |||||||||||||||||||| ||||
Sbjct: 12395727 gcatctagtttcttctcagcttcac 12395751
to top
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete
             sequence
          Length = 27470

 Score =  123 bits (62), Expect = 5e-25
 Identities = 129/150 (86%), Gaps = 1/150 (0%)
 Strand = Plus / Plus

                                                                         
Query: 301   acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
             ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 20228 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 20287

                                                                         
Query: 361   ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
             | ||||| || ||||||||||| || |  ||||||||||||||||| |||| ||||||||
Sbjct: 20288 ctccttggagttgaaggtatacagacaaatctttgtttacaacagctgttgcacagtcag 20347

                                           
Query: 421   gtggagttt-atcactctctgccaggatct 449
             |||| |||| |||| |||||| ||||||||
Sbjct: 20348 gtggcgtttcatcattctctgtcaggatct 20377



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 210   gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
             ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 20032 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 20091

                                 
Query: 270   gcttccatcttctgagacag 289
             |||||||| ||||| |||||
Sbjct: 20092 gcttccattttctgtgacag 20111
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  123 bits (62), Expect = 5e-25
 Identities = 129/150 (86%), Gaps = 1/150 (0%)
 Strand = Plus / Minus

                                                                            
Query: 301      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
                ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 27633869 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 27633810

                                                                            
Query: 361      ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
                | ||||| || ||||||||||| || |  ||||||||||||||||| |||| ||||||||
Sbjct: 27633809 ctccttggagttgaaggtatacagacaaatctttgtttacaacagctgttgcacagtcag 27633750

                                              
Query: 421      gtggagttt-atcactctctgccaggatct 449
                |||| |||| |||| |||||| ||||||||
Sbjct: 27633749 gtggcgtttcatcattctctgtcaggatct 27633720



 Score =  107 bits (54), Expect = 3e-20
 Identities = 128/150 (85%), Gaps = 2/150 (1%)
 Strand = Plus / Minus

                                                                          
Query: 301    acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
              ||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 651913 acttttgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagag 651854

                                                                          
Query: 361    ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
              | ||||| || || |||||||| ||||   ||||||| |||||||| |||| ||||||||
Sbjct: 651853 ctccttggagttggaggtatacagata-aactttgttcacaacagctgttgcacagtcag 651795

                                            
Query: 421    gtggagttt-atcactctctgccaggatct 449
              |||| |||| ||||||||||  ||||||||
Sbjct: 651794 gtggtgtttcatcactctctatcaggatct 651765



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 122/150 (81%), Gaps = 1/150 (0%)
 Strand = Plus / Plus

                                                                            
Query: 301      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
                ||||||||||| |||| ||||| ||||||||||||||  ||||  | || |||||||  |
Sbjct: 12392738 acttttggattccatctctcttcttccttagcttttcacgctcagcctctgcatttatgg 12392797

                                                                            
Query: 361      ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
                | |||||||||| |||||| || || |  |||||||| ||||||||  ||| ||| ||||
Sbjct: 12392798 ctccttgaagcttaaggtacaccgacaaatctttgttaacaacagcgattgcacaatcag 12392857

                                              
Query: 421      gtggagttt-atcactctctgccaggatct 449
                 ||||||||  ||| |||||| ||||||||
Sbjct: 12392858 ctggagtttcgtcattctctgtcaggatct 12392887



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 210      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27634065 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27634006

                                    
Query: 270      gcttccatcttctgagacag 289
                |||||||| ||||| |||||
Sbjct: 27634005 gcttccattttctgtgacag 27633986



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 246    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652072 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652023



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 156      gcatctagtttcttctcagcctcac 180
                |||||||||||||||||||| ||||
Sbjct: 12392490 gcatctagtttcttctcagcttcac 12392514
to top
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence,
            complete sequence
          Length = 123406

 Score =  123 bits (62), Expect = 5e-25
 Identities = 129/150 (86%), Gaps = 1/150 (0%)
 Strand = Plus / Plus

                                                                        
Query: 301  acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
            ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 7968 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 8027

                                                                        
Query: 361  ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
            | ||||| || ||||||||||| || |  ||||||||||||||||| |||| ||||||||
Sbjct: 8028 ctccttggagttgaaggtatacagacaaatctttgtttacaacagctgttgcacagtcag 8087

                                          
Query: 421  gtggagttt-atcactctctgccaggatct 449
            |||| |||| |||| |||||| ||||||||
Sbjct: 8088 gtggcgtttcatcattctctgtcaggatct 8117



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                        
Query: 210  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 7772 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 7831

                                
Query: 270  gcttccatcttctgagacag 289
            |||||||| ||||| |||||
Sbjct: 7832 gcttccattttctgtgacag 7851
to top
>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score =  121 bits (61), Expect = 2e-24
 Identities = 236/293 (80%), Gaps = 1/293 (0%)
 Strand = Plus / Minus

                                                                       
Query: 159 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 218
           |||| |||||||||||| |||| |||||||   |||||||| || || ||||||||||||
Sbjct: 801 tctaatttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttc 742

                                                                       
Query: 219 ctcatgtcctcctcttggacactggggggagccttctctctgtaaccggacgcttccatc 278
           |||||||||||||| || || ||  | ||||||||||| |  || || || || ||||| 
Sbjct: 741 ctcatgtcctcctcctgtacgctctgtggagccttctcgcgatagccagaggcgtccatt 682

                                                                       
Query: 279 ttctgagacagggcatgctgtaacttttggatttcatccctctttttccttagcttttcg 338
           ||||| | ||| |||| ||||| |||||| || |||||  | || ||| |||||||||| 
Sbjct: 681 ttctgcgccagtgcattctgtagcttttgaatctcatcttttttcttctttagcttttca 622

                                                                       
Query: 339 agctccacttccgcatttagagccccttgaagctgaaggtatacggataggtctttgttt 398
            | ||  | || ||||||| ||| ||||| ||||||||||| || || | ||||||||| 
Sbjct: 621 cgttcagcgtctgcatttaaagctccttggagctgaaggtacacagacaagtctttgttg 562

                                                                
Query: 399 acaacagcagttgaacagtcaggtggagttt-atcactctctgccaggatctt 450
           ||||||||||||| ||| || | |||||||| |||| |||||| |||||||||
Sbjct: 561 acaacagcagttgcacaatcggctggagtttcatcattctctgtcaggatctt 509
to top
>gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence
          Length = 1244

 Score =  113 bits (57), Expect = 5e-22
 Identities = 235/293 (80%), Gaps = 1/293 (0%)
 Strand = Plus / Minus

                                                                       
Query: 159 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 218
           |||| |||||||||||| |||| |||||||   ||||| || || || |||| |||||| 
Sbjct: 953 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggggagcttt 894

                                                                       
Query: 219 ctcatgtcctcctcttggacactggggggagccttctctctgtaaccggacgcttccatc 278
           |||||||||||||| || || ||  | ||||||||||| |  || || || || ||||| 
Sbjct: 893 ctcatgtcctcctcctgcacgctctgtggagccttctcgcgatacccagaggcgtccatt 834

                                                                       
Query: 279 ttctgagacagggcatgctgtaacttttggatttcatccctctttttccttagcttttcg 338
           ||||| | ||| ||||  |||| |||||| ||||||||  | || |||||||||||||| 
Sbjct: 833 ttctgtgccagtgcattttgtagcttttgaatttcatcttttttcttccttagcttttca 774

                                                                       
Query: 339 agctccacttccgcatttagagccccttgaagctgaaggtatacggataggtctttgttt 398
            ||||  | ||  |||||| | | ||||| ||||||||||| || || | ||||||||| 
Sbjct: 773 cgctcagcatcttcatttaaatctccttggagctgaaggtacacagacaagtctttgttg 714

                                                                
Query: 399 acaacagcagttgaacagtcaggtggagttt-atcactctctgccaggatctt 450
           ||||||||||||| ||| || |||||||||| ||||||||||| |||||||||
Sbjct: 713 acaacagcagttgcacaatcgggtggagtttcatcactctctgtcaggatctt 661
to top
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0005F16, complete sequence
          Length = 160053

 Score =  107 bits (54), Expect = 3e-20
 Identities = 128/150 (85%), Gaps = 2/150 (1%)
 Strand = Plus / Minus

                                                                         
Query: 301   acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
             ||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 37796 acttttgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagag 37737

                                                                         
Query: 361   ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
             | ||||| || || |||||||| ||||   ||||||| |||||||| |||| ||||||||
Sbjct: 37736 ctccttggagttggaggtatacagata-aactttgttcacaacagctgttgcacagtcag 37678

                                           
Query: 421   gtggagttt-atcactctctgccaggatct 449
             |||| |||| ||||||||||  ||||||||
Sbjct: 37677 gtggtgtttcatcactctctatcaggatct 37648



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 246   ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
             |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 37955 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 37906
to top
>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full
            insert sequence
          Length = 3639

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 131/161 (81%), Gaps = 1/161 (0%)
 Strand = Plus / Minus

                                                                        
Query: 291  gcatgctgtaacttttggatttcatccctctttttccttagcttttcgagctccacttcc 350
            ||||| |||| |||||||||| |||| ||||| ||||||||||||||  ||||  | || 
Sbjct: 3384 gcatggtgtagcttttggattccatctctcttcttccttagcttttcacgctcagcctct 3325

                                                                        
Query: 351  gcatttagagccccttgaagctgaaggtatacggataggtctttgtttacaacagcagtt 410
            |||||||  || |||||||||| |||||| || || |  |||||||| ||||||||  ||
Sbjct: 3324 gcatttatggctccttgaagcttaaggtacaccgacaaatctttgttaacaacagcgatt 3265

                                                     
Query: 411  gaacagtcaggtggagttt-atcactctctgccaggatctt 450
            | ||| |||| ||||||||  ||| |||||| |||||||||
Sbjct: 3264 gcacaatcagctggagtttcgtcattctctgtcaggatctt 3224



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 156  gcatctagtttcttctcagcctcac 180
            |||||||||||||||||||| ||||
Sbjct: 3519 gcatctagtttcttctcagcttcac 3495
to top
>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 77/89 (86%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 363 ccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcaggt 422
           ||||| ||||||||||| || || | ||||||||| ||||||||||||| ||| || | |
Sbjct: 650 ccttggagctgaaggtacacagacaagtctttgttgacaacagcagttgcacaatcggct 709

                                        
Query: 423 ggagttt-atcactctctgccaggatctt 450
           ||||||| ||||||||||| |||||||||
Sbjct: 710 ggagtttcatcactctctgtcaggatctt 738



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 159 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 218
           |||| |||||||||||| |||| |||||||   ||||| || || || ||||||||||| 
Sbjct: 446 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagcttt 505

                         
Query: 219 ctcatgtcctcctc 232
           ||||||||||||||
Sbjct: 506 ctcatgtcctcctc 519
to top
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0098H14, complete sequence
          Length = 132560

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 122/150 (81%), Gaps = 1/150 (0%)
 Strand = Plus / Plus

                                                                         
Query: 301   acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
             ||||||||||| |||| ||||| ||||||||||||||  ||||  | || |||||||  |
Sbjct: 54993 acttttggattccatctctcttcttccttagcttttcacgctcagcctctgcatttatgg 55052

                                                                         
Query: 361   ccccttgaagctgaaggtatacggataggtctttgtttacaacagcagttgaacagtcag 420
             | |||||||||| |||||| || || |  |||||||| ||||||||  ||| ||| ||||
Sbjct: 55053 ctccttgaagcttaaggtacaccgacaaatctttgttaacaacagcgattgcacaatcag 55112

                                           
Query: 421   gtggagttt-atcactctctgccaggatct 449
              ||||||||  ||| |||||| ||||||||
Sbjct: 55113 ctggagtttcgtcattctctgtcaggatct 55142



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 156   gcatctagtttcttctcagcctcac 180
             |||||||||||||||||||| ||||
Sbjct: 54745 gcatctagtttcttctcagcttcac 54769
to top
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Minus

                                                                          
Query: 301    acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
              ||||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  |||||||
Sbjct: 141536 acttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagag 141477

                                                        
Query: 361    ccccttgaagctgaaggtatacggataggtctttgtttacaa 402
              | ||| | ||||| |||||||||||||| |||||||| ||||
Sbjct: 141476 ctcctcgtagctggaggtatacggatagatctttgttgacaa 141435
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Minus

                                                                            
Query: 301      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
                ||||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  |||||||
Sbjct: 18843800 acttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagag 18843741

                                                          
Query: 361      ccccttgaagctgaaggtatacggataggtctttgtttacaa 402
                | ||| | ||||| |||||||||||||| |||||||| ||||
Sbjct: 18843740 ctcctcgtagctggaggtatacggatagatctttgttgacaa 18843699
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Minus

                                                                            
Query: 301      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 360
                ||||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  |||||||
Sbjct: 18855054 acttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagag 18854995

                                                          
Query: 361      ccccttgaagctgaaggtatacggataggtctttgtttacaa 402
                | ||| | ||||| |||||||||||||| |||||||| ||||
Sbjct: 18854994 ctcctcgtagctggaggtatacggatagatctttgttgacaa 18854953
to top
>ref|NM_197253.1| Oryza sativa (japonica cultivar-group) putative valyl tRNA synthetase
            (OSJNBa0062C05.27), mRNA
          Length = 3171

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 302  cttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagagc 361
            |||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  ||||||||
Sbjct: 3015 cttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagagc 2956

                                                     
Query: 362  cccttgaagctgaaggtatacggataggtctttgtttacaa 402
             ||| | ||||| |||||||||||||| |||||||| ||||
Sbjct: 2955 tcctcgtagctggaggtatacggatagatctttgttgacaa 2915
to top
>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 28     tttgaattttctataaatgtgacatca 54
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188
to top
>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 26    catttgaattttctataaatgt 47
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687
to top
>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    atttgaattttctataaatgt 47
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196
to top
>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc
            in-between-RING-finger ubiquitin-associated domain
            protein) (LOC480259), mRNA
          Length = 3490

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 175  cctcaccgatgacccgcagttgctc 199
            ||||||||||||| |||||||||||
Sbjct: 2442 cctcaccgatgacacgcagttgctc 2466
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 81      tatcaacttccaaacaaaaat 101
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822
to top
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     tatcaacttccaaacaaaaat 101
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064
to top
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    tatcaacttccaaacaaaaat 101
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457
to top
>emb|AL845536.8| Mouse DNA sequence from clone RP23-311G5 on chromosome 2, complete
              sequence
          Length = 179612

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 388    ggtctttgtttacaacagcagttga 412
              ||||||||| |||||||||||||||
Sbjct: 163591 ggtctttgtctacaacagcagttga 163567
to top
>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     aatgtgacatcaccaccatcc 63
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002
to top
>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ccatttgaattttctataaa 44
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189
to top
>ref|XM_543770.2| PREDICTED: Canis familiaris similar to solute carrier family 7
            (cationic amino acid transporter, y+ system), member 3
            (LOC486643), mRNA
          Length = 3279

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  atgctgtaacttttggattt 312
            ||||||||||||||||||||
Sbjct: 1571 atgctgtaacttttggattt 1590
to top
>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aacttccaaacaaaaatgcc 104
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766
to top
>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   aacttccaaacaaaaatgcc 104
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668
to top
>gb|AC162800.2| Mus musculus BAC clone RP24-173D2 from chromosome 17, complete sequence
          Length = 199202

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 355   ttagagccccttgaagctgaaggt 378
             ||||| ||||||||||||||||||
Sbjct: 47915 ttagatccccttgaagctgaaggt 47938
to top
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the
             HHEX gene for hematopoietically expressed homeobox, the 5'
             end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a
             eukaryotic translation initiation factor 2 subunit 2
             (eIF-2-beta) pseudogene and four CpG islands, complete
             sequence
          Length = 190144

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   agagccccttgaagctgaag 376
             ||||||||||||||||||||
Sbjct: 76717 agagccccttgaagctgaag 76736
to top
>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the
             3' end of the Col27a1 gene for procollagen type XXVII
             alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1,
             2 and 3, an orosomucoid pseudogene, the gene for a novel
             protein similar to human AT-hook protein AKNA, gene
             4933437N03Rik, the Whrn gene for whirlin and two CpG
             islands, complete sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gagcttcctcatgtcctcct 231
             ||||||||||||||||||||
Sbjct: 31754 gagcttcctcatgtcctcct 31735
to top
>emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chromosome 4 Contains a
             ribosomal protein S18 (Rps18) pseudogene, complete
             sequence
          Length = 156572

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   ttccatcttctgagacaggg 291
             ||||||||||||||||||||
Sbjct: 31116 ttccatcttctgagacaggg 31135
to top
>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    cctctttttccttagctttt 336
              ||||||||||||||||||||
Sbjct: 147791 cctctttttccttagctttt 147772
to top
>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gcttcctcatgtcctcctct 233
             ||||||||||||||||||||
Sbjct: 23507 gcttcctcatgtcctcctct 23526
to top
>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743
to top
>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaattttctataaatgtgac 50
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223
to top
>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   attttctataaatgtgacat 52
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980
to top
>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     aacttccaaacaaaaatgcc 104
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621
to top
>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tgaattttctataaatgtga 49
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076
to top
>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     catttgaattttctataaat 45
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080
to top
>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    attttctataaatgtgacat 52
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793
to top
>ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            6430402L03 (LOC302412), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  cttcctcatgtcctcctctt 234
            ||||||||||||||||||||
Sbjct: 1005 cttcctcatgtcctcctctt 986
to top
>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711
to top
>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    atgtgacatcaccaccatcc 63
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026
to top
>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence
          Length = 229073

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    ctgtaacttttggatttcat 315
              ||||||||||||||||||||
Sbjct: 161157 ctgtaacttttggatttcat 161138
to top
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaattttctataaatgtgac 50
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377
to top
>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tgaattttctataaatgtga 49
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358
to top
>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699
to top
>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tttgaattttctataaatgt 47
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461
to top
>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 171887

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   cttttggatttcatccctct 321
             ||||||||||||||||||||
Sbjct: 59407 cttttggatttcatccctct 59388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,727,554
Number of Sequences: 3902068
Number of extensions: 4727554
Number of successful extensions: 128428
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128093
Number of HSP's gapped (non-prelim): 322
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top