ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 76 9e-11
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
3gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 76 9e-11
4dbj|AK102852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
5dbj|AK058969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
6dbj|AK058460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
7gb|AY017415.1| Oryza sativa subsp. japonica nuclear cap-binding ... 68 2e-08
8gb|AY903394.1| Memecylon thouarsianum clone 3.7 glyceraldehyde 3... 52 0.001
9gb|AY903393.1| Memecylon thouarsianum clone 3.6 glyceraldehyde 3... 52 0.001
10gb|AY903391.1| Memecylon roseum clone 2.18 glyceraldehyde 3-phos... 52 0.001
11gb|AY903390.1| Memecylon roseum clone 2.17 glyceraldehyde 3-phos... 52 0.001
12gb|AY903389.1| Memecylon lateriflorum clone 1.8 glyceraldehyde 3... 52 0.001
13gb|AY903388.1| Memecylon lateriflorum clone 1.6 glyceraldehyde 3... 52 0.001
14gb|AY903383.1| Lijndenia procteri clone 5.4 glyceraldehyde 3-pho... 52 0.001
15gb|AY903381.1| Lijndenia danguyana clone 2.2 glyceraldehyde 3-ph... 52 0.001
16gb|AY903396.1| Mouriri sagotiana clone 6.1 glyceraldehyde 3-phos... 50 0.005
17gb|AY903382.1| Lijndenia procteri clone 5.3 glyceraldehyde 3-pho... 48 0.020
18gb|AY903380.1| Lijndenia cf. brenanii Stone et al. 2438 clone 4.... 48 0.020
19gb|AY903379.1| Lijndenia cf. brenanii Stone et al. 2438 clone 4.... 48 0.020
20gb|AY903378.1| Lijndenia cf. brenanii Stone et al. 2438 clone 4.... 48 0.020
21gb|AY903410.1| Warneckea sansibarica clone 1.3 glyceraldehyde 3-... 44 0.31
22gb|AY903409.1| Warneckea sansibarica clone 1.2 glyceraldehyde 3-... 44 0.31
23gb|AY903408.1| Warneckea sansibarica clone 1.1 glyceraldehyde 3-... 44 0.31
24gb|AY903407.1| Warneckea sansibarica clone 3.5 glyceraldehyde 3-... 44 0.31
25gb|AY903406.1| Warneckea membranifolia clone 1.3 glyceraldehyde ... 44 0.31
26gb|AY903405.1| Warneckea membranifolia clone 1.1 glyceraldehyde ... 44 0.31
27gb|AY903402.1| Warneckea fascicularis var. mangrovensis clone 2.... 44 0.31
28gb|AY903401.1| Warneckea fascicularis var. mangrovensis clone 2.... 44 0.31
29gb|AY903400.1| Warneckea fascicularis var. mangrovensis clone 2.... 44 0.31
30gb|AY903398.1| Spathandra blakeoides clone 5.3 glyceraldehyde 3-... 44 0.31
31gb|AY903397.1| Spathandra blakeoides clone 5.2 glyceraldehyde 3-... 44 0.31
32gb|AY903392.1| Memecylon thouarsianum clone 3.5 glyceraldehyde 3... 44 0.31
33gb|AY903395.1| Mouriri dumetosa clone 5.5 glyceraldehyde 3-phosp... 42 1.2
34gb|AC134384.6| Mus musculus strain C57BL/6J clone rp23-393d21, c... 40 4.8
35gb|AC134383.11| Mus musculus strain C57BL/6J clone rp23-348k4, c... 40 4.8
36gb|AY903399.1| Votomita guianensis clone 3.1 glyceraldehyde 3-ph... 40 4.8
37gb|AC008019.60| Mus musculus strain 129S6/SvEvTac chromosome 16 ... 40 4.8
38gb|BC019151.1| Mus musculus transmembrane protein 116, mRNA (cDN... 40 4.8
39ref|NM_029912.1| Mus musculus transmembrane protein 116 (Tmem116... 40 4.8
40dbj|AK039773.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 4.8
41dbj|AK015791.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.8
42dbj|AK015103.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.8
43dbj|AK021099.1| Mus musculus adult male corpus striatum cDNA, RI... 40 4.8
44dbj|AP003304.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.8
45emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 i... 40 4.8
46gb|AC083895.21| Mus musculus strain C57BL/6J chromosome 16 clone... 40 4.8 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                          
Query: 305      gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
                ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 12962271 gtctgcacaaaccggagaaagcagctttccggataagagggtgaatattcccaacgaa 12962214
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                          
Query: 305      gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
                ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 12959046 gtctgcacaaaccggagaaagcagctttccggataagagggtgaatattcccaacgaa 12958989
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>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0006D11, complete sequence
          Length = 176637

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                       
Query: 305   gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
             ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 39969 gtctgcacaaaccggagaaagcagctttccggataagagggtgaatattcccaacgaa 39912
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>dbj|AK102852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110I07, full
            insert sequence
          Length = 2992

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                      
Query: 305  gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
            ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 2636 gtctgcacaaaccggagaaagcagctttccggataagagggtgaatattcccaacgaa 2579
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>dbj|AK058969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-C11, full
            insert sequence
          Length = 1566

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                      
Query: 305  gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
            ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 1333 gtctgcacaaaccggagaaagcagctttccggataagagggtgaatattcccaacgaa 1276
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>dbj|AK058460.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A01, full
           insert sequence
          Length = 1182

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 305 gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
           ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 824 gtctgcacaaaccggagaaagcagctttccggataagagggtgaatattcccaacgaa 767
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>gb|AY017415.1| Oryza sativa subsp. japonica nuclear cap-binding protein CBP80 mRNA,
            complete cds
          Length = 3009

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                      
Query: 305  gtctgcacaaaccggagaatgcagctttccagatgagagggtgaatactcccgacgaa 362
            ||||||||||||||||||| |||||||||| ||| |||||||||||| |||| |||||
Sbjct: 2652 gtctgcacaaaccggagaa-gcagctttccggataagagggtgaatattcccaacgaa 2596
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>gb|AY903394.1| Memecylon thouarsianum clone 3.7 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 843

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatgaaact 521
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>gb|AY903393.1| Memecylon thouarsianum clone 3.6 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 844

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatgaaact 521
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>gb|AY903391.1| Memecylon roseum clone 2.18 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 844

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatgaaact 521
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>gb|AY903390.1| Memecylon roseum clone 2.17 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 844

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatgaaact 521
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>gb|AY903389.1| Memecylon lateriflorum clone 1.8 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 847

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatgaaact 521
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>gb|AY903388.1| Memecylon lateriflorum clone 1.6 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 847

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatgaaact 521
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>gb|AY903383.1| Lijndenia procteri clone 5.4 glyceraldehyde 3-phosphate
           dehydrogenase-like (GapC) gene, complete sequence
          Length = 870

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 570 aagagtgaccataggcaaatgaaact 545
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>gb|AY903381.1| Lijndenia danguyana clone 2.2 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 872

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||||||||||||||
Sbjct: 571 aagagtgaccataggcaaatgaaact 546
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>gb|AY903396.1| Mouriri sagotiana clone 6.1 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 870

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 116 agagtgaccataggcaaatgaaact 140
           |||||||||||||||||||||||||
Sbjct: 568 agagtgaccataggcaaatgaaact 544
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>gb|AY903382.1| Lijndenia procteri clone 5.3 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 871

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 115 aagagtgaccataggcaaatgaaa 138
           ||||||||||||||||||||||||
Sbjct: 570 aagagtgaccataggcaaatgaaa 547
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>gb|AY903380.1| Lijndenia cf. brenanii Stone et al. 2438 clone 4.3 glyceraldehyde
           3-phosphate dehydrogenase (GapC) gene, partial cds
          Length = 871

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 115 aagagtgaccataggcaaatgaaa 138
           ||||||||||||||||||||||||
Sbjct: 570 aagagtgaccataggcaaatgaaa 547
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>gb|AY903379.1| Lijndenia cf. brenanii Stone et al. 2438 clone 4.2 glyceraldehyde
           3-phosphate dehydrogenase (GapC) gene, partial cds
          Length = 870

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 115 aagagtgaccataggcaaatgaaa 138
           ||||||||||||||||||||||||
Sbjct: 569 aagagtgaccataggcaaatgaaa 546
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>gb|AY903378.1| Lijndenia cf. brenanii Stone et al. 2438 clone 4.1 glyceraldehyde
           3-phosphate dehydrogenase (GapC) gene, partial cds
          Length = 871

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 115 aagagtgaccataggcaaatgaaa 138
           ||||||||||||||||||||||||
Sbjct: 570 aagagtgaccataggcaaatgaaa 547
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>gb|AY903410.1| Warneckea sansibarica clone 1.3 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 861

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           |||||||||||||||| |||||||||
Sbjct: 570 aagagtgaccataggcgaatgaaact 545
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>gb|AY903409.1| Warneckea sansibarica clone 1.2 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 861

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           |||||||||||||||| |||||||||
Sbjct: 570 aagagtgaccataggcgaatgaaact 545
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>gb|AY903408.1| Warneckea sansibarica clone 1.1 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 861

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           |||||||||||||||| |||||||||
Sbjct: 570 aagagtgaccataggctaatgaaact 545
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>gb|AY903407.1| Warneckea sansibarica clone 3.5 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 861

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           |||||||||||||||| |||||||||
Sbjct: 570 aagagtgaccataggcgaatgaaact 545
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>gb|AY903406.1| Warneckea membranifolia clone 1.3 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 876

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||| ||||||||||
Sbjct: 571 aagagtgaccataggaaaatgaaact 546
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>gb|AY903405.1| Warneckea membranifolia clone 1.1 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 876

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||| ||||||||||
Sbjct: 571 aagagtgaccataggaaaatgaaact 546
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>gb|AY903402.1| Warneckea fascicularis var. mangrovensis clone 2.5 glyceraldehyde
           3-phosphate dehydrogenase (GapC) gene, partial cds
          Length = 875

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||| ||||||||||
Sbjct: 571 aagagtgaccataggaaaatgaaact 546
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>gb|AY903401.1| Warneckea fascicularis var. mangrovensis clone 2.2 glyceraldehyde
           3-phosphate dehydrogenase-like (GapC) gene, complete
           sequence
          Length = 876

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||| ||||||||||
Sbjct: 571 aagagtgaccataggaaaatgaaact 546
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>gb|AY903400.1| Warneckea fascicularis var. mangrovensis clone 2.1 glyceraldehyde
           3-phosphate dehydrogenase-like (GapC) gene, complete
           sequence
          Length = 874

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||| ||||||||||
Sbjct: 570 aagagtgaccataggaaaatgaaact 545
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>gb|AY903398.1| Spathandra blakeoides clone 5.3 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 848

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           ||||||||||||||| ||||||||||
Sbjct: 547 aagagtgaccataggtaaatgaaact 522
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>gb|AY903397.1| Spathandra blakeoides clone 5.2 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 848

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 115 aagagtgaccataggcaaatgaaact 140
           |||||||||| |||||||||||||||
Sbjct: 547 aagagtgaccgtaggcaaatgaaact 522
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>gb|AY903392.1| Memecylon thouarsianum clone 3.5 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 843

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 115 aagagtgaccataggcaaatga 136
           ||||||||||||||||||||||
Sbjct: 546 aagagtgaccataggcaaatga 525
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>gb|AY903395.1| Mouriri dumetosa clone 5.5 glyceraldehyde 3-phosphate dehydrogenase
           (GapC) gene, partial cds
          Length = 867

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 115 aagagtgaccataggcaaatgaaac 139
           |||||||||||| ||||||||||||
Sbjct: 567 aagagtgaccatgggcaaatgaaac 543
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>gb|AC134384.6| Mus musculus strain C57BL/6J clone rp23-393d21, complete sequence
          Length = 227620

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ttaagtctggagcagcagag 71
              ||||||||||||||||||||
Sbjct: 153787 ttaagtctggagcagcagag 153768
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>gb|AC134383.11| Mus musculus strain C57BL/6J clone rp23-348k4, complete sequence
          Length = 227587

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ttaagtctggagcagcagag 71
              ||||||||||||||||||||
Sbjct: 153756 ttaagtctggagcagcagag 153737
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>gb|AY903399.1| Votomita guianensis clone 3.1 glyceraldehyde 3-phosphate
           dehydrogenase (GapC) gene, partial cds
          Length = 872

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 tgaccataggcaaatgaaac 139
           ||||||||||||||||||||
Sbjct: 567 tgaccataggcaaatgaaac 548
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>gb|AC008019.60| Mus musculus strain 129S6/SvEvTac chromosome 16 clone rp21-519i24,
              complete sequence
          Length = 189707

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     ttaagtctggagcagcagag 71
              ||||||||||||||||||||
Sbjct: 138067 ttaagtctggagcagcagag 138086
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>gb|BC019151.1| Mus musculus transmembrane protein 116, mRNA (cDNA clone MGC:29263
           IMAGE:5064772), complete cds
          Length = 1268

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 aagaccatgatggtgaggaa 269
           ||||||||||||||||||||
Sbjct: 606 aagaccatgatggtgaggaa 587
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>ref|NM_029912.1| Mus musculus transmembrane protein 116 (Tmem116), mRNA
          Length = 1268

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 aagaccatgatggtgaggaa 269
           ||||||||||||||||||||
Sbjct: 606 aagaccatgatggtgaggaa 587
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>dbj|AK039773.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330106A04 product:RIKEN cDNA C030022K24
            gene, full insert sequence
          Length = 2221

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  aagaccatgatggtgaggaa 269
            ||||||||||||||||||||
Sbjct: 1160 aagaccatgatggtgaggaa 1141
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>dbj|AK015791.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930513P12 product:RIKEN cDNA 4930513P12
           gene, full insert sequence
          Length = 1185

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 aagaccatgatggtgaggaa 269
           ||||||||||||||||||||
Sbjct: 674 aagaccatgatggtgaggaa 655
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>dbj|AK015103.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930406A18 product:hypothetical protein,
           full insert sequence
          Length = 1248

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 aagaccatgatggtgaggaa 269
           ||||||||||||||||||||
Sbjct: 866 aagaccatgatggtgaggaa 847
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>dbj|AK021099.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030022K24 product:weakly
           similar to HYPOTHETICAL 40.1 KDA PROTEIN (FRAGMENT)
           [Homo sapiens], full insert sequence
          Length = 1296

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 aagaccatgatggtgaggaa 269
           ||||||||||||||||||||
Sbjct: 655 aagaccatgatggtgaggaa 636
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>dbj|AP003304.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-104B12, complete
             sequences
          Length = 182218

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   gatggtgaggaatcaaaggc 277
             ||||||||||||||||||||
Sbjct: 62150 gatggtgaggaatcaaaggc 62169
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>emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 in linkage group 7,
           complete sequence
          Length = 145555

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  ctggagcagcagagttcgca 77
           ||||||||||||||||||||
Sbjct: 790 ctggagcagcagagttcgca 809
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>gb|AC083895.21| Mus musculus strain C57BL/6J chromosome 16 clone rp23-294d8, complete
              sequence
          Length = 187658

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ttaagtctggagcagcagag 71
              ||||||||||||||||||||
Sbjct: 153758 ttaagtctggagcagcagag 153739


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,168,260
Number of Sequences: 3902068
Number of extensions: 3168260
Number of successful extensions: 52689
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52630
Number of HSP's gapped (non-prelim): 58
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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