ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG15_DEBHA (Q6BLM0) Putative lipase ATG15 (EC 3.1.1.3) (Autopha... 28 6.6
2NPY6R_MOUSE (Q61212) Neuropeptide Y receptor type 6 (NPY6-R) (Pa... 28 8.6

>ATG15_DEBHA (Q6BLM0) Putative lipase ATG15 (EC 3.1.1.3) (Autophagy-related|
           protein 15)
          Length = 615

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 43  RQQVEKHSPKLAELSRCQRSSAKSSNLFQVFTAF 144
           ++ +E HS +L EL+  Q S    SNL  V+ A+
Sbjct: 102 KEYLEAHSEELEELTTMQTSEVDESNLQDVYDAY 135



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>NPY6R_MOUSE (Q61212) Neuropeptide Y receptor type 6 (NPY6-R) (Pancreatic|
           polypeptide receptor 2) (PP2)
          Length = 371

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +1

Query: 313 SAMVLHLIP*QVQSYLVLQDPRGWRPGV-----GLVPVW 414
           S  +  L+   ++ Y ++ +PRGW+P V     G++ +W
Sbjct: 121 SVSIFSLVLIAIERYQLIVNPRGWKPRVAHAYWGIILIW 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,840,068
Number of Sequences: 219361
Number of extensions: 711124
Number of successful extensions: 2097
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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