Clone Name | rbastl25d08 |
---|---|
Clone Library Name | barley_pub |
>gb|BC034057.1| Mus musculus elastin, mRNA (cDNA clone IMAGE:4038838), with apparent retained intron Length = 3114 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 615 aactcctgcagcagcagctgctgca 639
>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete sequence Length = 201395 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 63372 aactcctgcagcagcagctgctgca 63348
>ref|NM_007925.2| Mus musculus elastin (Eln), mRNA Length = 3782 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 1079 aactcctgcagcagcagctgctgca 1103
>dbj|AK080277.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630021B08 product:elastin, full insert sequence Length = 3751 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 1102 aactcctgcagcagcagctgctgca 1126
>dbj|AK041860.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630042I19 product:elastin, full insert sequence Length = 3782 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 1079 aactcctgcagcagcagctgctgca 1103
>gb|AF289665.1|AF289665 Mus musculus EIF4H gene, partial cds; LIMK1 gene, complete cds; and ELN gene, partial cds Length = 107257 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 87472 aactcctgcagcagcagctgctgca 87448
>gb|BC051649.1| Mus musculus elastin, mRNA (cDNA clone MGC:51697 IMAGE:5346255), complete cds Length = 3643 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 1147 aactcctgcagcagcagctgctgca 1171
>gb|U08210.1|MMU08210 Mus musculus tropoelastin mRNA, complete cds Length = 2651 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 241 aactcctgcagcagcagctgctgca 265 ||||||||||||||||||||||||| Sbjct: 1065 aactcctgcagcagcagctgctgca 1089
>ref|XM_663312.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20119) partial mRNA Length = 321 Score = 46.1 bits (23), Expect = 0.062 Identities = 23/23 (100%) Strand = Plus / Minus Query: 243 ctcctgcagcagcagctgctgca 265 ||||||||||||||||||||||| Sbjct: 61 ctcctgcagcagcagctgctgca 39
>ref|XM_849584.1| PREDICTED: Canis familiaris similar to sal-like 4 (LOC483067), mRNA Length = 723 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cctgcagcagcagctgctgca 265 ||||||||||||||||||||| Sbjct: 87 cctgcagcagcagctgctgca 107
>emb|BX957219.1| Methanococcus maripaludis S2 complete genome; segment 1/5 Length = 345730 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 ctcctgcagcagcagctgctgcacc 267 |||||||||| |||||||||||||| Sbjct: 259719 ctcctgcagctgcagctgctgcacc 259695
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168652 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 aaactcctgcagcagcagctgctgc 264 ||||||||||||| ||||||||||| Sbjct: 145885 aaactcctgcagcggcagctgctgc 145861
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179283 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 aaactcctgcagcagcagctgctgc 264 ||||||||||||| ||||||||||| Sbjct: 21254 aaactcctgcagcggcagctgctgc 21230
>gb|AC092122.5| Homo sapiens chromosome 16 clone RP11-102F12, complete sequence Length = 174809 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 gtatgagtaactctataagtgactc 94 |||| |||||||||||||||||||| Sbjct: 159013 gtataagtaactctataagtgactc 159037
>dbj|BS000099.1| Pan troglodytes chromosome 22 clone:PTB-047E13, map 22, complete sequences Length = 231583 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 cccccaaaaaatcaaatgttg 155 ||||||||||||||||||||| Sbjct: 52041 cccccaaaaaatcaaatgttg 52021
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete sequence Length = 299903 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 aaactcctgcagcagcagctgctgc 264 ||||||||||||| ||||||||||| Sbjct: 64271 aaactcctgcagcggcagctgctgc 64247
>dbj|AP001691.1| Homo sapiens genomic DNA, chromosome 21q, section 35/105 Length = 340000 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 cccccaaaaaatcaaatgttg 155 ||||||||||||||||||||| Sbjct: 316631 cccccaaaaaatcaaatgttg 316611
>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete sequence Length = 148490 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cctgcagcagcagctgctgca 265 ||||||||||||||||||||| Sbjct: 53495 cctgcagcagcagctgctgca 53515
>dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-774J1, complete sequence Length = 167901 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cctgcagcagcagctgctgca 265 ||||||||||||||||||||| Sbjct: 165481 cctgcagcagcagctgctgca 165501
>dbj|AP000402.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B76A21, LL56-APP region, complete sequence Length = 156238 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 cccccaaaaaatcaaatgttg 155 ||||||||||||||||||||| Sbjct: 139803 cccccaaaaaatcaaatgttg 139783
>gb|AY854947.1| Drosophila americana strain G96.48 fused1 (fu1) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 825 ctgcagcagcagctgctgca 806
>gb|AY854946.1| Drosophila americana strain G96.47 fused1 (fu1) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 825 ctgcagcagcagctgctgca 806
>gb|AY854945.1| Drosophila americana strain G96.45 fused1 (fu1) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 825 ctgcagcagcagctgctgca 806
>gb|AY854944.1| Drosophila americana strain G96.31 fused1 (fu1) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 825 ctgcagcagcagctgctgca 806
>gb|AY854943.1| Drosophila americana strain G96.11 fused1 (fu1) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 825 ctgcagcagcagctgctgca 806
>gb|AY854942.1| Drosophila virilis strain A11 fused1 (fu1) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 825 ctgcagcagcagctgctgca 806
>ref|NM_123760.1| Arabidopsis thaliana nucleotide binding AT5G43930 transcript variant AT5G43930.1 mRNA, complete cds Length = 2599 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1674 ctgcagcagcagctgctgca 1655
>ref|NM_001036930.1| Arabidopsis thaliana nucleotide binding AT5G43930 transcript variant AT5G43930.3 mRNA, complete cds Length = 2828 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1734 ctgcagcagcagctgctgca 1715
>ref|NM_001036929.1| Arabidopsis thaliana nucleotide binding AT5G43930 transcript variant AT5G43930.2 mRNA, complete cds Length = 2740 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1734 ctgcagcagcagctgctgca 1715
>gb|AC149325.2| Phakopsora pachyrhizi clone JGIAFNA-13C13, complete sequence Length = 36989 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tgcagcagcagctgctgcac 266 |||||||||||||||||||| Sbjct: 31574 tgcagcagcagctgctgcac 31593
>gb|AC154428.2| Mus musculus BAC clone RP24-200P20 from chromosome 16, complete sequence Length = 149867 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 110765 ctgcagcagcagctgctgca 110746
>gb|DQ213344.1| Taeniopygia guttata clone 0063P0009D06 RIKEN cDNA 2510049J12-like mRNA, complete sequence Length = 1108 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 cctgcagcagcagctgctgcaccg 268 ||||||||||||||||| |||||| Sbjct: 567 cctgcagcagcagctgcagcaccg 590
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 248477 ctgcagcagcagctgctgca 248458
>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence Length = 222399 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 182072 ctgcagcagcagctgctgca 182091
>ref|XM_953845.1| Neurospora crassa OR74A hypothetical protein (NCU09699.1) partial mRNA Length = 3837 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 3452 gcagcagcagctgctgcacc 3433
>ref|XM_330348.1| Neurospora crassa OR74A hypothetical protein (NCU09699.1) partial mRNA Length = 3837 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 3452 gcagcagcagctgctgcacc 3433
>gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosome 17, complete sequence Length = 157958 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 116969 ctgcagcagcagctgctgca 116950
>ref|XM_655127.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2615.2), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cctgcagcagcagctgctgc 264 |||||||||||||||||||| Sbjct: 418 cctgcagcagcagctgctgc 399
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 535651 gcagcagcagctgctgcacc 535670
>ref|XM_842704.1| Leishmania major strain Friedlin protein kinase (LMJ_0774) partial mRNA Length = 1779 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 87 gcagcagcagctgctgcacc 106
>ref|XM_567640.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK00770) partial mRNA Length = 1474 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 151 ctgcagcagcagctgctgca 170
>ref|XM_798984.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509337.10) partial mRNA Length = 1890 Score = 40.1 bits (20), Expect = 3.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 237 ttaaaactcct-gcagcagcagctgctg 263 ||||||||||| |||||||||||||||| Sbjct: 1172 ttaaaactcctcgcagcagcagctgctg 1145
>gb|AC126438.3| Mus musculus BAC clone RP24-255G1 from chromosome 17, complete sequence Length = 152802 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 35267 ctgcagcagcagctgctgca 35286
>gb|AY186602.1| Chlamydomonas reinhardtii long flagella (LF3) gene, complete cds Length = 7467 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cctgcagcagcagctgctgc 264 |||||||||||||||||||| Sbjct: 1569 cctgcagcagcagctgctgc 1550
>gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome 17, complete sequence Length = 197213 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 188842 ctgcagcagcagctgctgca 188861
>emb|AL121748.7|HSA342D11 Human DNA sequence from clone RP11-342D11 on chromosome 10 Contains the 3' end of the NRP1 gene for neuropilin 1 and two novel genes, complete sequence Length = 178183 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 gaaatatggattcttctttt 65 |||||||||||||||||||| Sbjct: 49365 gaaatatggattcttctttt 49346
>emb|AL031904.1|HS103M22 Human DNA sequence from clone RP1-103M22 on chromosome 6p24 Contains a CpG island, complete sequence Length = 140709 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gaaaataaagtttggggaaa 49 |||||||||||||||||||| Sbjct: 116644 gaaaataaagtttggggaaa 116625
>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 Length = 95527 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 83319 gcagcagcagctgctgcacc 83300
>gb|AC026689.6| Homo sapiens chromosome 5 clone CTB-55A14, complete sequence Length = 215150 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttttgaggaaacaaacggtt 118 |||||||||||||||||||| Sbjct: 117023 ttttgaggaaacaaacggtt 117004
>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete sequence Length = 188618 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttattatgcagtcatggcac 207 |||||||||||||||||||| Sbjct: 154235 ttattatgcagtcatggcac 154254
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cccaaaaaatcaaatgttgc 156 |||||||||||||||||||| Sbjct: 81541 cccaaaaaatcaaatgttgc 81560
>gb|AC007196.5| Arabidopsis thaliana chromosome 2 clone T18C20 map RNS1, complete sequence Length = 35137 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccttccaaaacatttattat 194 |||||||||||||||||||| Sbjct: 33217 ccttccaaaacatttattat 33236
>gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map mi310, complete sequence Length = 103874 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ccttccaaaacatttattat 194 |||||||||||||||||||| Sbjct: 3703 ccttccaaaacatttattat 3722
>gb|AY016022.1| Mus musculus clone 33L10 alpha globin gene cluster, complete sequence Length = 65871 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 2989 ctgcagcagcagctgctgca 2970
>gb|AY064620.1| Arabidopsis thaliana unknown protein (At5g43930; MRH10.2) mRNA, complete cds Length = 2205 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1510 ctgcagcagcagctgctgca 1491
>dbj|AK162332.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130217I15 product:Insulin-regulated membrane aminopeptidase IRAP homolog [Mus musculus], full insert sequence Length = 2474 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 16 ctgcagcagcagctgctgca 35
>gb|AY054527.1| Arabidopsis thaliana Unknown protein (At5g43930; MRH10.2) mRNA, complete cds Length = 2599 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1674 ctgcagcagcagctgctgca 1655
>gb|AY395708.1| Leishmania donovani RAD51 protein mRNA, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cctgcagcagcagctgctgc 264 |||||||||||||||||||| Sbjct: 730 cctgcagcagcagctgctgc 711
>gb|AF062379.1|AF062379 Leishmania major strain Friedlin Rad51 homolog (RAD51) gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cctgcagcagcagctgctgc 264 |||||||||||||||||||| Sbjct: 730 cctgcagcagcagctgctgc 711
>gb|AY014449.1| Drosophila americana strain FP99.57 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014444.1| Drosophila americana strain G96.48 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014442.1| Drosophila americana strain G96.40 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014441.1| Drosophila americana strain G96.36 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014440.1| Drosophila americana strain G96.31 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014439.1| Drosophila americana strain G96.30 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014438.1| Drosophila americana strain G96.27 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014437.1| Drosophila americana strain G96.24 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014436.1| Drosophila americana strain G96.23 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014435.1| Drosophila americana strain G96.21 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AY014434.1| Drosophila americana strain G96.10 fused1 protein (fu1) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF116684.1|AF116684 Homo sapiens PRO2037 mRNA, complete cds Length = 1330 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 catggcacataatctcttct 219 |||||||||||||||||||| Sbjct: 873 catggcacataatctcttct 854
>emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in linkage group 5, complete sequence Length = 197352 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ttattatgcagtcatggcac 207 |||||||||||||||||||| Sbjct: 102844 ttattatgcagtcatggcac 102825
>ref|XM_392670.2| PREDICTED: Apis mellifera similar to CG5284-PB, isoform B (LOC409144), mRNA Length = 2837 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 aaactcctgcagcagcagctgctg 263 |||||||||||||||| ||||||| Sbjct: 1196 aaactcctgcagcagctgctgctg 1173
>gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosome 16, complete sequence Length = 223585 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 205111 ctgcagcagcagctgctgca 205092
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence Length = 160810 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 catggcacataatctcttct 219 |||||||||||||||||||| Sbjct: 35073 catggcacataatctcttct 35092
>gb|AC131532.7| Homo sapiens 12 BAC RP11-408B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85167 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cttcttttctgagtatgagtaact 81 ||||||||||||| |||||||||| Sbjct: 14761 cttcttttctgagaatgagtaact 14738
>gb|AF239859.1|AF239859 Drosophila virilis strain W158 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162549.2|AF162549 Drosophila virilis strain b42 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162548.2|AF162548 Drosophila virilis strain b31 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162546.2|AF162546 Drosophila virilis strain b15 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162545.2|AF162545 Drosophila virilis strain a33 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162544.2|AF162544 Drosophila virilis strain a13 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162543.2|AF162543 Drosophila virilis strain a12 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162542.2|AF162542 Drosophila virilis strain a11 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162541.2|AF162541 Drosophila virilis strain skt fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162540.2|AF162540 Drosophila virilis strain sbb fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162539.2|AF162539 Drosophila virilis strain S9 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162538.2|AF162538 Drosophila virilis strain S2 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162537.2|AF162537 Drosophila virilis strain 15010-1051.47 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>gb|AF162536.2|AF162536 Drosophila virilis strain 15010-1051.9 fused protein (fu) gene, partial cds Length = 2401 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1270 ctgcagcagcagctgctgca 1251
>dbj|AK211093.1| Mus musculus cDNA, clone:Y2G0120K04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000047627, based on BLAT search Length = 385 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gaaggccccccaaaaaatca 148 |||||||||||||||||||| Sbjct: 158 gaaggccccccaaaaaatca 139
>dbj|AB006703.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRH10 Length = 71522 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 9519 ctgcagcagcagctgctgca 9500
>ref|XM_321492.2| Anopheles gambiae str. PEST ENSANGP00000017379 (ENSANGG00000014890), partial mRNA Length = 1341 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 267 gcagcagcagctgctgcacc 286
>ref|XM_307376.2| Anopheles gambiae str. PEST ENSANGP00000013737 (ENSANGG00000011248), partial mRNA Length = 3474 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcagcagcagctgctgcacc 267 |||||||||||||||||||| Sbjct: 261 gcagcagcagctgctgcacc 280
>gb|AC170155.2| Phakopsora pachyrhizi clone JGIAFNA-1989A17, complete sequence Length = 40775 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tgcagcagcagctgctgcac 266 |||||||||||||||||||| Sbjct: 26170 tgcagcagcagctgctgcac 26189
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tttctgagtatgagtaactc 82 |||||||||||||||||||| Sbjct: 694435 tttctgagtatgagtaactc 694454
>emb|AL953861.5| Zebrafish DNA sequence from clone CH211-132C16, complete sequence Length = 165789 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aagtttggggaaatatggat 56 |||||||||||||||||||| Sbjct: 127791 aagtttggggaaatatggat 127810
>gb|DQ120644.1| Hylobates lar PABP3 gene, partial cds Length = 1905 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ctgcagcagcagctgctgca 265 |||||||||||||||||||| Sbjct: 1501 ctgcagcagcagctgctgca 1482
>gb|AC149384.2| Phakopsora pachyrhizi clone JGIAFNA-5B10, complete sequence Length = 42316 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tgcagcagcagctgctgcac 266 |||||||||||||||||||| Sbjct: 1059 tgcagcagcagctgctgcac 1078
>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete sequence Length = 203422 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cctgcagcagcagctgctgc 264 |||||||||||||||||||| Sbjct: 173760 cctgcagcagcagctgctgc 173741 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,023,532 Number of Sequences: 3902068 Number of extensions: 4023532 Number of successful extensions: 91796 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 91550 Number of HSP's gapped (non-prelim): 243 length of query: 292 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 270 effective length of database: 17,147,199,772 effective search space: 4629743938440 effective search space used: 4629743938440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)