>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 196     atcttcaacggcaaaacgcggaa 218
               |||||||||||||||||||||||
Sbjct: 4679031 atcttcaacggcaaaacgcggaa 4679053

>gb|AY567499.1| HIV-1 isolate SUR05Env from India envelope glycoprotein (env) gene,
           partial cds
          Length = 594

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 373 gacaaataatatcaaaacaata 394
           ||||||||||||||||||||||
Sbjct: 33  gacaaataatatcaaaacaata 54

>gb|AF443111.1| HIV-1 isolate 00BW3876.9 from Botswana, complete genome
          Length = 9030

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 373  gacaaataatatcaaaacaata 394
            ||||||||||||||||||||||
Sbjct: 6400 gacaaataatatcaaaacaata 6421

>gb|AY137041.1| HIV-1 isolate ZA044e01 from South Africa envelope glycoprotein
           (env) gene, partial cds
          Length = 576

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 373 gacaaataatatcaaaacaata 394
           ||||||||||||||||||||||
Sbjct: 30  gacaaataatatcaaaacaata 51

>emb|AJ404193.1|HIM404193 Human immunodeficiency virus type 1 proviral partial env gene for
           envelope glycoprotein gp120, strain C_97DC.MBTB11
          Length = 576

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 373 gacaaataatatcaaaacaata 394
           ||||||||||||||||||||||
Sbjct: 15  gacaaataatatcaaaacaata 36

>gb|AF106351.1|AF106351 HIV-1 isolate TZB0091 from Tanzania, envelope glycoprotein, C2-C5
           region (env) gene, partial cds
          Length = 663

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 373 gacaaataatatcaaaacaata 394
           ||||||||||||||||||||||
Sbjct: 18  gacaaataatatcaaaacaata 39

>ref|XM_454768.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E18194g predicted mRNA
          Length = 2598

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  tcatgtcaaaatcatcaggga 288
            |||||||||||||||||||||
Sbjct: 1522 tcatgtcaaaatcatcaggga 1502

>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 268     tcatgtcaaaatcatcaggga 288
               |||||||||||||||||||||
Sbjct: 1614636 tcatgtcaaaatcatcaggga 1614616

>emb|BX649258.11| Zebrafish DNA sequence from clone CH211-203F4 in linkage group 15,
             complete sequence
          Length = 148199

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   atgtcaaaatcatcagggaag 290
             |||||||||||||||||||||
Sbjct: 55438 atgtcaaaatcatcagggaag 55458

>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete
              sequence
          Length = 170074

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 374    acaaataatatcaaaacaata 394
              |||||||||||||||||||||
Sbjct: 146989 acaaataatatcaaaacaata 147009

>emb|AL928696.6| Mouse DNA sequence from clone RP23-387G11 on chromosome 2, complete
             sequence
          Length = 102448

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   gataacatacacatgttacag 147
             |||||||||||||||||||||
Sbjct: 71023 gataacatacacatgttacag 71043

>dbj|AB050908.1| Human immunodeficiency virus type 1 proviral env gene, C2-V3
           loop-C3 region, partial cds, isolate:patiant:99ZM18
          Length = 279

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 374 acaaataatatcaaaacaata 394
           |||||||||||||||||||||
Sbjct: 34  acaaataatatcaaaacaata 54

>dbj|AB050907.1| Human immunodeficiency virus type 1 proviral env gene, C2-V3
           loop-C3 region, partial cds, isolate:patiant:99ZM13
          Length = 279

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 374 acaaataatatcaaaacaata 394
           |||||||||||||||||||||
Sbjct: 34  acaaataatatcaaaacaata 54

>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence
          Length = 196086

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    aaccctgagacaaataatat 384
              ||||||||||||||||||||
Sbjct: 193926 aaccctgagacaaataatat 193907

>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence
          Length = 219414

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   ggggcctcatgatgaagcag 343
             ||||||||||||||||||||
Sbjct: 20496 ggggcctcatgatgaagcag 20515

>gb|AY522332.4| Agrotis segetum granulovirus, complete genome
          Length = 131680

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tcatctttcatgtcaaaatc 280
              ||||||||||||||||||||
Sbjct: 117465 tcatctttcatgtcaaaatc 117446

>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence
          Length = 172286

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ggggcctcatgatgaagcag 343
             ||||||||||||||||||||
Sbjct: 61030 ggggcctcatgatgaagcag 61011

>emb|AL132948.2|CEY39B6A Caenorhabditis elegans YAC Y39B6A, complete sequence
          Length = 246237

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aacaaaaatatttcaccaca 111
              ||||||||||||||||||||
Sbjct: 104631 aacaaaaatatttcaccaca 104612

>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence
          Length = 239758

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   aaccctgagacaaataatat 384
             ||||||||||||||||||||
Sbjct: 65133 aaccctgagacaaataatat 65152

>gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, complete sequence
          Length = 174783

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    aaccctgagacaaataatat 384
              ||||||||||||||||||||
Sbjct: 109212 aaccctgagacaaataatat 109231

>gb|AC102040.16| Mus musculus chromosome 18, clone RP23-273B8, complete sequence
          Length = 250880

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    tcttcaatcatctttcatgt 273
              ||||||||||||||||||||
Sbjct: 164357 tcttcaatcatctttcatgt 164376

>emb|AL160274.9| Human DNA sequence from clone RP11-395N21 on chromosome 9 Contains the
             3' end of the UNC13 gene for unc-13-like (C.
             elegans)(MUNC13, hmunc13) and the 5' end of a novel gene,
             complete sequence
          Length = 144102

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 75    gggaactcactcaggacaacaaaa 98
             ||||||||||||||||||| ||||
Sbjct: 50220 gggaactcactcaggacaaaaaaa 50197

>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 122049

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    agacatacatataacatctg 73
             ||||||||||||||||||||
Sbjct: 55279 agacatacatataacatctg 55298

>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No.
            2
          Length = 198354

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  atctttcatgtcaaaatcat 282
            ||||||||||||||||||||
Sbjct: 2036 atctttcatgtcaaaatcat 2055

>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1
          Length = 206420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    atctttcatgtcaaaatcat 282
              ||||||||||||||||||||
Sbjct: 200292 atctttcatgtcaaaatcat 200311

>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86
          Length = 198780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   atctttcatgtcaaaatcat 282
             ||||||||||||||||||||
Sbjct: 54942 atctttcatgtcaaaatcat 54923

>emb|AL929017.9| Zebrafish DNA sequence from clone DKEY-4C15 in linkage group 20,
             complete sequence
          Length = 208922

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    acaacaaaaatatttcacca 109
             ||||||||||||||||||||
Sbjct: 73257 acaacaaaaatatttcacca 73276

>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177792

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     atatttcaccacacccaaga 118
              ||||||||||||||||||||
Sbjct: 167469 atatttcaccacacccaaga 167488

>emb|AL606986.27| Mouse DNA sequence from clone RP23-258K3 on chromosome 4, complete
             sequence
          Length = 219634

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 250   acattcttcaatcatctttcatgt 273
             |||||||||||| |||||||||||
Sbjct: 29643 acattcttcaattatctttcatgt 29620


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,652,753
Number of Sequences: 3902068
Number of extensions: 4652753
Number of successful extensions: 86430
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86355
Number of HSP's gapped (non-prelim): 75
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)