ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chr... 48 0.020
2emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch... 48 0.020
3gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, comp... 48 0.020
4gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, comp... 48 0.020
5emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chr... 46 0.080
6emb|AL645859.10| Human DNA sequence from clone RP11-316H11 on ch... 42 1.2
7emb|BX322610.5| Zebrafish DNA sequence from clone CH211-245M13 i... 42 1.2
8gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 42 1.2
9gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complet... 42 1.2
10gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, com... 42 1.2
11emb|BX005464.7| Zebrafish DNA sequence from clone DKEY-24J21, co... 42 1.2
12gb|AC149361.2| Phakopsora pachyrhizi clone JGIAFNA-41F19, comple... 40 4.9
13gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, com... 40 4.9
14gb|AC154842.2| Mus musculus BAC clone RP23-55C11 from chromosome... 40 4.9
15gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosom... 40 4.9
16gb|AY642814.1| Leucoagaricus gongylophorus isolate H internal tr... 40 4.9
17gb|AY642813.1| Leucoagaricus gongylophorus isolate I internal tr... 40 4.9
18gb|AY642812.1| Leucoagaricus gongylophorus isolate J internal tr... 40 4.9
19gb|AY642810.1| Leucoagaricus gongylophorus isolate L internal tr... 40 4.9
20gb|AY642809.1| Leucoagaricus gongylophorus isolate M internal tr... 40 4.9
21gb|AY642807.1| Leucoagaricus gongylophorus isolate O internal tr... 40 4.9
22ref|XM_323474.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.9
23ref|XM_956198.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.9
24gb|AC124414.3| Mus musculus BAC clone RP24-282K24 from chromosom... 40 4.9
25gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds 40 4.9
26gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, co... 40 4.9
27gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complet... 40 4.9
28gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 40 4.9
29gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 40 4.9
30emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on ch... 40 4.9
31emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chr... 40 4.9
32emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chr... 40 4.9
33emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chro... 40 4.9
34emb|AL137219.11| Human DNA sequence from clone RP11-219B15 on ch... 40 4.9
35emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G... 40 4.9
36emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P1... 40 4.9
37emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 ... 40 4.9
38emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 40 4.9
39gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 4.9
40emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmi... 40 4.9
41emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B... 40 4.9
42gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Canc... 40 4.9
43gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 4.9
44gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, com... 40 4.9
45emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 ... 40 4.9
46emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in... 40 4.9
47emb|BX927377.5| Zebrafish DNA sequence from clone DKEY-5I22 in l... 40 4.9
48gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Can... 40 4.9
49gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, p... 40 4.9
50dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 4.9
51dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
53gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complet... 40 4.9
54gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5,... 40 4.9
55gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, comple... 40 4.9
56gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, compl... 40 4.9
57gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, com... 40 4.9
58gb|AC013717.8| Homo sapiens BAC clone RP11-24I5 from 2, complete... 40 4.9
59gb|AC092567.4| Homo sapiens BAC clone CTD-2010B19 from 2, comple... 40 4.9
60dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
61gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clon... 40 4.9
62emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMW... 40 4.9
63dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.9
64dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 4.9
65gb|AF076430.1|AF076430 Leucoagaricus gongylophorus clone 7 5.8S ... 40 4.9
66gb|AF076424.1|AF076424 Leucoagaricus gongylophorus clone 1 5.8S ... 40 4.9
67gb|AF076423.1|AF076423 Leucoagaricus gongylophorus clone 7 5.8S ... 40 4.9
68gb|AF076422.1|AF076422 Leucoagaricus gongylophorus clone 6 5.8S ... 40 4.9
69gb|AF076421.1|AF076421 Leucoagaricus gongylophorus clone 5 5.8S ... 40 4.9
70gb|AF076420.1|AF076420 Leucoagaricus gongylophorus clone 4 5.8S ... 40 4.9
71gb|AF076418.1|AF076418 Leucoagaricus gongylophorus clone 2 5.8S ... 40 4.9
72gb|AF076417.1|AF076417 Leucoagaricus gongylophorus clone 1 5.8S ... 40 4.9
73gb|AF076400.1|AF076400 Leucoagaricus gongylophorus clone 8 5.8S ... 40 4.9
74gb|AF076399.1|AF076399 Leucoagaricus gongylophorus clone 7 5.8S ... 40 4.9
75gb|AF076398.1|AF076398 Leucoagaricus gongylophorus clone 6 5.8S ... 40 4.9
76gb|AF076396.1|AF076396 Leucoagaricus gongylophorus clone 4 5.8S ... 40 4.9
77gb|AF076393.1|AF076393 Leucoagaricus gongylophorus clone 1 5.8S ... 40 4.9
78gb|AF076391.1|AF076391 Leucoagaricus gongylophorus clone 6 5.8S ... 40 4.9
79gb|AF076389.1|AF076389 Leucoagaricus gongylophorus clone 4 5.8S ... 40 4.9
80gb|AF076388.1|AF076388 Leucoagaricus gongylophorus clone 3 5.8S ... 40 4.9
81gb|AF076387.1|AF076387 Leucoagaricus gongylophorus clone 2 5.8S ... 40 4.9
82dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.9
83gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.9
84emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from... 40 4.9
85emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.9
86emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4... 40 4.9
87gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Canc... 40 4.9
88emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chr... 40 4.9
89dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.9

>emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 115551

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 281   tcaaaactcaactgtatttctata 304
             ||||||||||||||||||||||||
Sbjct: 81214 tcaaaactcaactgtatttctata 81237



to top

>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the
             5' end of a novel gene (CGI-67), a novel gene, a novel
             gene (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||||||||||||||||||||||
Sbjct: 99133 caaaactcaactgtatttctatac 99110



to top

>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence
          Length = 209754

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||||||||||||||||||||||
Sbjct: 72435 caaaactcaactgtatttctatac 72412



to top

>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence
          Length = 199004

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 282    caaaactcaactgtatttctatac 305
              ||||||||||||||||||||||||
Sbjct: 126557 caaaactcaactgtatttctatac 126580



to top

>emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chromosome 1 Contains the 5'
              end of the XPR1 gene for xenotropic and polytropic
              retrovirus receptor, complete sequence
          Length = 178375

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 282    caaaactcaactgtatttctata 304
              |||||||||||||||||||||||
Sbjct: 153626 caaaactcaactgtatttctata 153604



to top

>emb|AL645859.10| Human DNA sequence from clone RP11-316H11 on chromosome 1 Contains part
             of the PTPRU gene for protein tyrosine phosphatase
             receptor type U and a CpG island, complete sequence
          Length = 40256

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 125   gacatcacaagaaactgaagaaatgcaaa 153
             |||||||| ||| ||||||||||||||||
Sbjct: 21584 gacatcactagacactgaagaaatgcaaa 21556



to top

>emb|BX322610.5| Zebrafish DNA sequence from clone CH211-245M13 in linkage group 25,
             complete sequence
          Length = 72706

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    ctttcaaataaaaaacaaaac 73
             |||||||||||||||||||||
Sbjct: 33668 ctttcaaataaaaaacaaaac 33648



to top

>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 281   tcaaaactcaactgtatttctatac 305
             ||||||||||| |||||||||||||
Sbjct: 35876 tcaaaactcaattgtatttctatac 35852



to top

>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence
          Length = 138778

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   tcaaaactcaactgtatttctatac 305
             |||||| ||||||||||||||||||
Sbjct: 14323 tcaaaaatcaactgtatttctatac 14347



to top

>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence
          Length = 228068

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 133    aagaaactgaagaaatgcaaa 153
              |||||||||||||||||||||
Sbjct: 196267 aagaaactgaagaaatgcaaa 196247



to top

>emb|BX005464.7| Zebrafish DNA sequence from clone DKEY-24J21, complete sequence
          Length = 199639

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    ctttcaaataaaaaacaaaac 73
             |||||||||||||||||||||
Sbjct: 99067 ctttcaaataaaaaacaaaac 99087



to top

>gb|AC149361.2| Phakopsora pachyrhizi clone JGIAFNA-41F19, complete sequence
          Length = 35721

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    aaaaaacaaaacccagcggttcaa 85
             |||||| |||||||||||||||||
Sbjct: 32246 aaaaaataaaacccagcggttcaa 32223



to top

>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence
          Length = 196086

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     aacaacaaaggcctgcacat 29
              ||||||||||||||||||||
Sbjct: 111162 aacaacaaaggcctgcacat 111143



to top

>gb|AC154842.2| Mus musculus BAC clone RP23-55C11 from chromosome 17, complete sequence
          Length = 252431

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 38    attccctaacctttgctttcaaataaaa 65
             |||||| ||||||| |||||||||||||
Sbjct: 46821 attccccaaccttttctttcaaataaaa 46794



to top

>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     caaataaaaaacaaaaccca 76
              ||||||||||||||||||||
Sbjct: 108160 caaataaaaaacaaaaccca 108179



to top

>gb|AY642814.1| Leucoagaricus gongylophorus isolate H internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 665

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 472 aaaggcctgcacatattttc 453



to top

>gb|AY642813.1| Leucoagaricus gongylophorus isolate I internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 642

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 453 aaaggcctgcacatattttc 434



to top

>gb|AY642812.1| Leucoagaricus gongylophorus isolate J internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 691

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 499 aaaggcctgcacatattttc 480



to top

>gb|AY642810.1| Leucoagaricus gongylophorus isolate L internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 577

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 436 aaaggcctgcacatattttc 417



to top

>gb|AY642809.1| Leucoagaricus gongylophorus isolate M internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 577

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 436 aaaggcctgcacatattttc 417



to top

>gb|AY642807.1| Leucoagaricus gongylophorus isolate O internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 681

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 499 aaaggcctgcacatattttc 480



to top

>ref|XM_323474.1| Neurospora crassa OR74A hypothetical protein (NCU04135.1) partial
           mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 gaagccgaacaacaaaaaca 182
           ||||||||||||||||||||
Sbjct: 208 gaagccgaacaacaaaaaca 227



to top

>ref|XM_956198.1| Neurospora crassa OR74A hypothetical protein (NCU04135.1) partial
           mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 gaagccgaacaacaaaaaca 182
           ||||||||||||||||||||
Sbjct: 208 gaagccgaacaacaaaaaca 227



to top

>gb|AC124414.3| Mus musculus BAC clone RP24-282K24 from chromosome 12, complete
             sequence
          Length = 176443

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    caaataaaaaacaaaaccca 76
             ||||||||||||||||||||
Sbjct: 25826 caaataaaaaacaaaaccca 25845



to top

>gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds
          Length = 3102

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  caaaactcaactgtatttctatac 305
            ||||| ||||||||||||||||||
Sbjct: 1838 caaaaatcaactgtatttctatac 1861



to top

>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence
          Length = 239758

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aacaacaaaggcctgcacat 29
              ||||||||||||||||||||
Sbjct: 147902 aacaacaaaggcctgcacat 147921



to top

>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence
          Length = 180155

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     aaataaaaaacaaaacccag 77
              ||||||||||||||||||||
Sbjct: 106062 aaataaaaaacaaaacccag 106081



to top

>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     ctttcaaataaaaaacaaaa 72
              ||||||||||||||||||||
Sbjct: 149662 ctttcaaataaaaaacaaaa 149643



to top

>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 296   atttctatactgtaaaactatatc 319
             ||||||||| ||||||||||||||
Sbjct: 57869 atttctataatgtaaaactatatc 57892



to top

>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3
             histone, family 3B (H3F3B) pseudogene, the BMP15 gene for
             bone morphogenetic protein 15, and a high-mobility group
             box 1 (HMGB1) pseudogene, complete sequence
          Length = 125495

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||||||||||| ||||||||||
Sbjct: 74522 caaaactcaactgaatttctatac 74545



to top

>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two
             CpG islands, complete sequence
          Length = 123887

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   tcaaaactcaactgtatttctata 304
             |||||| |||||||||||||||||
Sbjct: 50834 tcaaaagtcaactgtatttctata 50811



to top

>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete
             sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ctttcaaataaaaaacaaaa 72
             ||||||||||||||||||||
Sbjct: 58280 ctttcaaataaaaaacaaaa 58299



to top

>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel
              gene, the 5' end of the CHAC gene for chorea acanthocytosis
              and a CpG island, complete sequence
          Length = 110633

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 282    caaaactcaactgtatttctatac 305
              |||||||||| |||||||||||||
Sbjct: 109107 caaaactcaattgtatttctatac 109084



to top

>emb|AL137219.11| Human DNA sequence from clone RP11-219B15 on chromosome 13, complete
            sequence
          Length = 31762

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   ctttcaaataaaaaacaaaa 72
            ||||||||||||||||||||
Sbjct: 5533 ctttcaaataaaaaacaaaa 5552



to top

>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3
             Contains the gene for NTF2-related export protein (NXT1),
             the ZNF336 gene for zinc finger protein 336, two putative
             novel genes, the NAPB gene for N-ethylmaleimide-sensitive
             factor attachment protein beta, the CSTL1 gene for
             cystatin-like 1, the CST11 gene for cystatin 11 and six
             CpG islands, complete sequence
          Length = 112180

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||| ||||||||||||||||||
Sbjct: 42775 caaaattcaactgtatttctatac 42798



to top

>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1
             Contains a zinc finger protein 208 (ZNF208) pseudogene,
             complete sequence
          Length = 103367

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             |||||||||| |||||||||||||
Sbjct: 67212 caaaactcaattgtatttctatac 67235



to top

>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains
             the MAFB gene for v-maf musculoaponeurotic fibrosarcoma
             oncogene homolog B (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 145593

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||| ||||||||||||||||||
Sbjct: 13232 caaaaatcaactgtatttctatac 13255



to top

>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 281   tcaaaactcaactgtatttctata 304
             |||||| |||||||||||||||||
Sbjct: 20058 tcaaaaatcaactgtatttctata 20081



to top

>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||| ||||||||||||||||||
Sbjct: 56889 caaaaatcaactgtatttctatac 56866



to top

>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6
          Length = 125561

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gaagccgaacaacaaaaaca 182
             ||||||||||||||||||||
Sbjct: 77242 gaagccgaacaacaaaaaca 77261



to top

>emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B18 on chromosome Xq22.2-23
            Contains part of a novel gene for a protein similar to
            nuclear cap binding protein and the 5' end of the MID1
            gene for midline 1 (Opitz/BBB syndrome) protein, complete
            sequence
          Length = 94081

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  caaaactcaactgtatttctatac 305
            ||||| ||||||||||||||||||
Sbjct: 9071 caaaaatcaactgtatttctatac 9094



to top

>gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 20925

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 267  caaaaaattcttcctcaaaa 286
            ||||||||||||||||||||
Sbjct: 8262 caaaaaattcttcctcaaaa 8243



to top

>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  caaaactcaactgtatttctatac 305
            ||||| ||||||||||||||||||
Sbjct: 5161 caaaaatcaactgtatttctatac 5184



to top

>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence
          Length = 175967

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||| ||||||||||||||||||
Sbjct: 65642 caaaaatcaactgtatttctatac 65619



to top

>emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 in linkage group 17,
             complete sequence
          Length = 162970

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    caaataaaaaacaaaaccca 76
             ||||||||||||||||||||
Sbjct: 35645 caaataaaaaacaaaaccca 35664



to top

>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1,
             complete sequence
          Length = 188290

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   aaaaaattcttcctcaaaac 287
             ||||||||||||||||||||
Sbjct: 61397 aaaaaattcttcctcaaaac 61416



to top

>emb|BX927377.5| Zebrafish DNA sequence from clone DKEY-5I22 in linkage group 2, complete
              sequence
          Length = 164652

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aaaacccagcggttcaaaat 88
              ||||||||||||||||||||
Sbjct: 133330 aaaacccagcggttcaaaat 133311



to top

>gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188709

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   atcacaagaaactgaagaaatgca 151
             |||||||||||||| |||||||||
Sbjct: 60038 atcacaagaaactgtagaaatgca 60015



to top

>gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 197 acatacatcaggtcgacaca 216
           ||||||||||||||||||||
Sbjct: 82  acatacatcaggtcgacaca 63



to top

>dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810431G11 product:glutathione
           S-transferase, alpha 4, full insert sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 262 tgtgtcaaaaaattcttcctcaaa 285
           |||||||| |||||||||||||||
Sbjct: 205 tgtgtcaagaaattcttcctcaaa 182



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       acctttgctttcaaataaaa 65
                ||||||||||||||||||||
Sbjct: 23357470 acctttgctttcaaataaaa 23357451



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 50       ttgctttcaaataaaaaaca 69
                ||||||||||||||||||||
Sbjct: 27953489 ttgctttcaaataaaaaaca 27953470



to top

>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence
          Length = 131085

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   aaaactcaactgtatttcta 302
             ||||||||||||||||||||
Sbjct: 85055 aaaactcaactgtatttcta 85036



to top

>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||| ||||||||||||||||||
Sbjct: 40483 caaaaatcaactgtatttctatac 40506



to top

>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence
          Length = 202029

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 282    caaaactcaactgtatttctatac 305
              ||||| ||||||||||||||||||
Sbjct: 131285 caaaaatcaactgtatttctatac 131308



to top

>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 282   caaaactcaactgtatttctatac 305
             ||||| ||||||||||||||||||
Sbjct: 55239 caaaaatcaactgtatttctatac 55216



to top

>gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, complete sequence
          Length = 160770

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aaataaaaaacaaaacccag 77
             ||||||||||||||||||||
Sbjct: 58130 aaataaaaaacaaaacccag 58149



to top

>gb|AC013717.8| Homo sapiens BAC clone RP11-24I5 from 2, complete sequence
          Length = 168813

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     tttcaaataaaaaacaaaac 73
              ||||||||||||||||||||
Sbjct: 139760 tttcaaataaaaaacaaaac 139779



to top

>gb|AC092567.4| Homo sapiens BAC clone CTD-2010B19 from 2, complete sequence
          Length = 163496

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ttcaaataaaaaacaaaacc 74
             ||||||||||||||||||||
Sbjct: 42871 ttcaaataaaaaacaaaacc 42852



to top

>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144G04
          Length = 194459

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ttgctttcaaataaaaaaca 69
              ||||||||||||||||||||
Sbjct: 140170 ttgctttcaaataaaaaaca 140151



to top

>gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clone B845I12, complete sequence
          Length = 178237

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    aaaaaattcttcctcaaaac 287
              ||||||||||||||||||||
Sbjct: 139920 aaaaaattcttcctcaaaac 139939



to top

>emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMWG0704
          Length = 521

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 ttacgatgacacatcaccag 244
           ||||||||||||||||||||
Sbjct: 347 ttacgatgacacatcaccag 328



to top

>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    aaaaaattcttcctcaaaac 287
              ||||||||||||||||||||
Sbjct: 276715 aaaaaattcttcctcaaaac 276734



to top

>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete
              sequence
          Length = 152472

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 282    caaaactcaactgtatttctatac 305
              ||||| ||||||||||||||||||
Sbjct: 113042 caaaaatcaactgtatttctatac 113065



to top

>gb|AF076430.1|AF076430 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, partial sequence
          Length = 371

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 221 aaaggcctgcacatattttc 202



to top

>gb|AF076424.1|AF076424 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, partial sequence
          Length = 372

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 221 aaaggcctgcacatattttc 202



to top

>gb|AF076423.1|AF076423 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 820

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076422.1|AF076422 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 829

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076421.1|AF076421 Leucoagaricus gongylophorus clone 5 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 836

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 167 aaaggcctgcacatattttc 148



to top

>gb|AF076420.1|AF076420 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 881

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076418.1|AF076418 Leucoagaricus gongylophorus clone 2 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 883

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076417.1|AF076417 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 876

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 211 aaaggcctgcacatattttc 192



to top

>gb|AF076400.1|AF076400 Leucoagaricus gongylophorus clone 8 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 830

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076399.1|AF076399 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076398.1|AF076398 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076396.1|AF076396 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 830

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076393.1|AF076393 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 974

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076391.1|AF076391 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 818

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076389.1|AF076389 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 762

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076388.1|AF076388 Leucoagaricus gongylophorus clone 3 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, partial sequence
          Length = 369

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>gb|AF076387.1|AF076387 Leucoagaricus gongylophorus clone 2 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 648

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  aaaggcctgcacatattttc 35
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198



to top

>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7
          Length = 150708

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   attcttcctcaaaactcaactgta 296
             |||||||| |||||||||||||||
Sbjct: 90541 attcttccacaaaactcaactgta 90518



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       acctttgctttcaaataaaa 65
                ||||||||||||||||||||
Sbjct: 23285661 acctttgctttcaaataaaa 23285642



to top

>emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from PAC RP4-646P19 map 21q21
            region D21S189-LA297, complete sequence
          Length = 121360

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  aaaaaattcttcctcaaaac 287
            ||||||||||||||||||||
Sbjct: 1095 aaaaaattcttcctcaaaac 1076



to top

>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     acctttgctttcaaataaaa 65
              ||||||||||||||||||||
Sbjct: 144689 acctttgctttcaaataaaa 144708



to top

>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE
          Length = 136545

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 269   aaaaattcttcctcaaaactcaac 292
             |||||||||||||| |||||||||
Sbjct: 58235 aaaaattcttcctctaaactcaac 58212



to top

>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 187830

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ctttcaaataaaaaacaaaa 72
            ||||||||||||||||||||
Sbjct: 9133 ctttcaaataaaaaacaaaa 9114



to top

>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
             sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aattcttcctcaaaactcaa 291
             ||||||||||||||||||||
Sbjct: 23072 aattcttcctcaaaactcaa 23053



to top

>dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1967D12, complete
            sequence
          Length = 160952

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 273  attcttcctcaaaactcaactgta 296
            |||||||| |||||||||||||||
Sbjct: 8941 attcttccacaaaactcaactgta 8918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,199,980
Number of Sequences: 3902068
Number of extensions: 6199980
Number of successful extensions: 147119
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 146777
Number of HSP's gapped (non-prelim): 342
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top