Clone Name | rbastl25d03 |
---|---|
Clone Library Name | barley_pub |
>emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 115551 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 281 tcaaaactcaactgtatttctata 304 |||||||||||||||||||||||| Sbjct: 81214 tcaaaactcaactgtatttctata 81237
>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the 5' end of a novel gene (CGI-67), a novel gene, a novel gene (LOC138240) and a CpG island, complete sequence Length = 195844 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctatac 305 |||||||||||||||||||||||| Sbjct: 99133 caaaactcaactgtatttctatac 99110
>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence Length = 209754 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctatac 305 |||||||||||||||||||||||| Sbjct: 72435 caaaactcaactgtatttctatac 72412
>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence Length = 199004 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 |||||||||||||||||||||||| Sbjct: 126557 caaaactcaactgtatttctatac 126580
>emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chromosome 1 Contains the 5' end of the XPR1 gene for xenotropic and polytropic retrovirus receptor, complete sequence Length = 178375 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctata 304 ||||||||||||||||||||||| Sbjct: 153626 caaaactcaactgtatttctata 153604
>emb|AL645859.10| Human DNA sequence from clone RP11-316H11 on chromosome 1 Contains part of the PTPRU gene for protein tyrosine phosphatase receptor type U and a CpG island, complete sequence Length = 40256 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 125 gacatcacaagaaactgaagaaatgcaaa 153 |||||||| ||| |||||||||||||||| Sbjct: 21584 gacatcactagacactgaagaaatgcaaa 21556
>emb|BX322610.5| Zebrafish DNA sequence from clone CH211-245M13 in linkage group 25, complete sequence Length = 72706 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ctttcaaataaaaaacaaaac 73 ||||||||||||||||||||| Sbjct: 33668 ctttcaaataaaaaacaaaac 33648
>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence Length = 116951 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 tcaaaactcaactgtatttctatac 305 ||||||||||| ||||||||||||| Sbjct: 35876 tcaaaactcaattgtatttctatac 35852
>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence Length = 138778 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 tcaaaactcaactgtatttctatac 305 |||||| |||||||||||||||||| Sbjct: 14323 tcaaaaatcaactgtatttctatac 14347
>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence Length = 228068 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 aagaaactgaagaaatgcaaa 153 ||||||||||||||||||||| Sbjct: 196267 aagaaactgaagaaatgcaaa 196247
>emb|BX005464.7| Zebrafish DNA sequence from clone DKEY-24J21, complete sequence Length = 199639 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ctttcaaataaaaaacaaaac 73 ||||||||||||||||||||| Sbjct: 99067 ctttcaaataaaaaacaaaac 99087
>gb|AC149361.2| Phakopsora pachyrhizi clone JGIAFNA-41F19, complete sequence Length = 35721 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 aaaaaacaaaacccagcggttcaa 85 |||||| ||||||||||||||||| Sbjct: 32246 aaaaaataaaacccagcggttcaa 32223
>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence Length = 196086 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aacaacaaaggcctgcacat 29 |||||||||||||||||||| Sbjct: 111162 aacaacaaaggcctgcacat 111143
>gb|AC154842.2| Mus musculus BAC clone RP23-55C11 from chromosome 17, complete sequence Length = 252431 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 attccctaacctttgctttcaaataaaa 65 |||||| ||||||| ||||||||||||| Sbjct: 46821 attccccaaccttttctttcaaataaaa 46794
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 caaataaaaaacaaaaccca 76 |||||||||||||||||||| Sbjct: 108160 caaataaaaaacaaaaccca 108179
>gb|AY642814.1| Leucoagaricus gongylophorus isolate H internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 665 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 472 aaaggcctgcacatattttc 453
>gb|AY642813.1| Leucoagaricus gongylophorus isolate I internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 642 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 453 aaaggcctgcacatattttc 434
>gb|AY642812.1| Leucoagaricus gongylophorus isolate J internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 691 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 499 aaaggcctgcacatattttc 480
>gb|AY642810.1| Leucoagaricus gongylophorus isolate L internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 577 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 436 aaaggcctgcacatattttc 417
>gb|AY642809.1| Leucoagaricus gongylophorus isolate M internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 577 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 436 aaaggcctgcacatattttc 417
>gb|AY642807.1| Leucoagaricus gongylophorus isolate O internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 681 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 499 aaaggcctgcacatattttc 480
>ref|XM_323474.1| Neurospora crassa OR74A hypothetical protein (NCU04135.1) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gaagccgaacaacaaaaaca 182 |||||||||||||||||||| Sbjct: 208 gaagccgaacaacaaaaaca 227
>ref|XM_956198.1| Neurospora crassa OR74A hypothetical protein (NCU04135.1) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gaagccgaacaacaaaaaca 182 |||||||||||||||||||| Sbjct: 208 gaagccgaacaacaaaaaca 227
>gb|AC124414.3| Mus musculus BAC clone RP24-282K24 from chromosome 12, complete sequence Length = 176443 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 caaataaaaaacaaaaccca 76 |||||||||||||||||||| Sbjct: 25826 caaataaaaaacaaaaccca 25845
>gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds Length = 3102 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 1838 caaaaatcaactgtatttctatac 1861
>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence Length = 239758 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aacaacaaaggcctgcacat 29 |||||||||||||||||||| Sbjct: 147902 aacaacaaaggcctgcacat 147921
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aaataaaaaacaaaacccag 77 |||||||||||||||||||| Sbjct: 106062 aaataaaaaacaaaacccag 106081
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209149 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctttcaaataaaaaacaaaa 72 |||||||||||||||||||| Sbjct: 149662 ctttcaaataaaaaacaaaa 149643
>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence Length = 135248 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 atttctatactgtaaaactatatc 319 ||||||||| |||||||||||||| Sbjct: 57869 atttctataatgtaaaactatatc 57892
>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3 histone, family 3B (H3F3B) pseudogene, the BMP15 gene for bone morphogenetic protein 15, and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 125495 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||||||||||| |||||||||| Sbjct: 74522 caaaactcaactgaatttctatac 74545
>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two CpG islands, complete sequence Length = 123887 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tcaaaactcaactgtatttctata 304 |||||| ||||||||||||||||| Sbjct: 50834 tcaaaagtcaactgtatttctata 50811
>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ctttcaaataaaaaacaaaa 72 |||||||||||||||||||| Sbjct: 58280 ctttcaaataaaaaacaaaa 58299
>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel gene, the 5' end of the CHAC gene for chorea acanthocytosis and a CpG island, complete sequence Length = 110633 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctatac 305 |||||||||| ||||||||||||| Sbjct: 109107 caaaactcaattgtatttctatac 109084
>emb|AL137219.11| Human DNA sequence from clone RP11-219B15 on chromosome 13, complete sequence Length = 31762 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ctttcaaataaaaaacaaaa 72 |||||||||||||||||||| Sbjct: 5533 ctttcaaataaaaaacaaaa 5552
>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3 Contains the gene for NTF2-related export protein (NXT1), the ZNF336 gene for zinc finger protein 336, two putative novel genes, the NAPB gene for N-ethylmaleimide-sensitive factor attachment protein beta, the CSTL1 gene for cystatin-like 1, the CST11 gene for cystatin 11 and six CpG islands, complete sequence Length = 112180 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 42775 caaaattcaactgtatttctatac 42798
>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1 Contains a zinc finger protein 208 (ZNF208) pseudogene, complete sequence Length = 103367 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 |||||||||| ||||||||||||| Sbjct: 67212 caaaactcaattgtatttctatac 67235
>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains the MAFB gene for v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian), a novel gene and two CpG islands, complete sequence Length = 145593 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 13232 caaaaatcaactgtatttctatac 13255
>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35 Contains the OPRD1 gene for opioid receptor delta 1, two novel genes, the 5' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) and a CpG island, complete sequence Length = 148540 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tcaaaactcaactgtatttctata 304 |||||| ||||||||||||||||| Sbjct: 20058 tcaaaaatcaactgtatttctata 20081
>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence Length = 207799 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 56889 caaaaatcaactgtatttctatac 56866
>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6 Length = 125561 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gaagccgaacaacaaaaaca 182 |||||||||||||||||||| Sbjct: 77242 gaagccgaacaacaaaaaca 77261
>emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B18 on chromosome Xq22.2-23 Contains part of a novel gene for a protein similar to nuclear cap binding protein and the 5' end of the MID1 gene for midline 1 (Opitz/BBB syndrome) protein, complete sequence Length = 94081 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 9071 caaaaatcaactgtatttctatac 9094
>gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 20925 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 caaaaaattcttcctcaaaa 286 |||||||||||||||||||| Sbjct: 8262 caaaaaattcttcctcaaaa 8243
>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence Length = 124497 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 5161 caaaaatcaactgtatttctatac 5184
>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence Length = 175967 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 65642 caaaaatcaactgtatttctatac 65619
>emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 in linkage group 17, complete sequence Length = 162970 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 caaataaaaaacaaaaccca 76 |||||||||||||||||||| Sbjct: 35645 caaataaaaaacaaaaccca 35664
>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1, complete sequence Length = 188290 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aaaaaattcttcctcaaaac 287 |||||||||||||||||||| Sbjct: 61397 aaaaaattcttcctcaaaac 61416
>emb|BX927377.5| Zebrafish DNA sequence from clone DKEY-5I22 in linkage group 2, complete sequence Length = 164652 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aaaacccagcggttcaaaat 88 |||||||||||||||||||| Sbjct: 133330 aaaacccagcggttcaaaat 133311
>gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188709 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 atcacaagaaactgaagaaatgca 151 |||||||||||||| ||||||||| Sbjct: 60038 atcacaagaaactgtagaaatgca 60015
>gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, partial cds Length = 378 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 acatacatcaggtcgacaca 216 |||||||||||||||||||| Sbjct: 82 acatacatcaggtcgacaca 63
>dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810431G11 product:glutathione S-transferase, alpha 4, full insert sequence Length = 926 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 tgtgtcaaaaaattcttcctcaaa 285 |||||||| ||||||||||||||| Sbjct: 205 tgtgtcaagaaattcttcctcaaa 182
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 acctttgctttcaaataaaa 65 |||||||||||||||||||| Sbjct: 23357470 acctttgctttcaaataaaa 23357451
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttgctttcaaataaaaaaca 69 |||||||||||||||||||| Sbjct: 27953489 ttgctttcaaataaaaaaca 27953470
>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence Length = 131085 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 aaaactcaactgtatttcta 302 |||||||||||||||||||| Sbjct: 85055 aaaactcaactgtatttcta 85036
>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence Length = 149172 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 40483 caaaaatcaactgtatttctatac 40506
>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence Length = 202029 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 131285 caaaaatcaactgtatttctatac 131308
>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 55239 caaaaatcaactgtatttctatac 55216
>gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, complete sequence Length = 160770 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aaataaaaaacaaaacccag 77 |||||||||||||||||||| Sbjct: 58130 aaataaaaaacaaaacccag 58149
>gb|AC013717.8| Homo sapiens BAC clone RP11-24I5 from 2, complete sequence Length = 168813 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tttcaaataaaaaacaaaac 73 |||||||||||||||||||| Sbjct: 139760 tttcaaataaaaaacaaaac 139779
>gb|AC092567.4| Homo sapiens BAC clone CTD-2010B19 from 2, complete sequence Length = 163496 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcaaataaaaaacaaaacc 74 |||||||||||||||||||| Sbjct: 42871 ttcaaataaaaaacaaaacc 42852
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ttgctttcaaataaaaaaca 69 |||||||||||||||||||| Sbjct: 140170 ttgctttcaaataaaaaaca 140151
>gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clone B845I12, complete sequence Length = 178237 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aaaaaattcttcctcaaaac 287 |||||||||||||||||||| Sbjct: 139920 aaaaaattcttcctcaaaac 139939
>emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMWG0704 Length = 521 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ttacgatgacacatcaccag 244 |||||||||||||||||||| Sbjct: 347 ttacgatgacacatcaccag 328
>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105 Length = 340000 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aaaaaattcttcctcaaaac 287 |||||||||||||||||||| Sbjct: 276715 aaaaaattcttcctcaaaac 276734
>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete sequence Length = 152472 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 caaaactcaactgtatttctatac 305 ||||| |||||||||||||||||| Sbjct: 113042 caaaaatcaactgtatttctatac 113065
>gb|AF076430.1|AF076430 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene, and internal transcribed spacer 2, partial sequence Length = 371 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 221 aaaggcctgcacatattttc 202
>gb|AF076424.1|AF076424 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene, and internal transcribed spacer 2, partial sequence Length = 372 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 221 aaaggcctgcacatattttc 202
>gb|AF076423.1|AF076423 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 820 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076422.1|AF076422 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 829 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076421.1|AF076421 Leucoagaricus gongylophorus clone 5 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 836 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 167 aaaggcctgcacatattttc 148
>gb|AF076420.1|AF076420 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 881 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076418.1|AF076418 Leucoagaricus gongylophorus clone 2 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 883 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076417.1|AF076417 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 876 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 211 aaaggcctgcacatattttc 192
>gb|AF076400.1|AF076400 Leucoagaricus gongylophorus clone 8 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 830 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076399.1|AF076399 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 780 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076398.1|AF076398 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 871 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076396.1|AF076396 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 830 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076393.1|AF076393 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 974 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076391.1|AF076391 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 818 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076389.1|AF076389 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 762 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076388.1|AF076388 Leucoagaricus gongylophorus clone 3 5.8S ribosomal RNA gene, and internal transcribed spacer 2, partial sequence Length = 369 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>gb|AF076387.1|AF076387 Leucoagaricus gongylophorus clone 2 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 648 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaggcctgcacatattttc 35 |||||||||||||||||||| Sbjct: 217 aaaggcctgcacatattttc 198
>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7 Length = 150708 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 attcttcctcaaaactcaactgta 296 |||||||| ||||||||||||||| Sbjct: 90541 attcttccacaaaactcaactgta 90518
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 acctttgctttcaaataaaa 65 |||||||||||||||||||| Sbjct: 23285661 acctttgctttcaaataaaa 23285642
>emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from PAC RP4-646P19 map 21q21 region D21S189-LA297, complete sequence Length = 121360 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 aaaaaattcttcctcaaaac 287 |||||||||||||||||||| Sbjct: 1095 aaaaaattcttcctcaaaac 1076
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 acctttgctttcaaataaaa 65 |||||||||||||||||||| Sbjct: 144689 acctttgctttcaaataaaa 144708
>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE Length = 136545 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 aaaaattcttcctcaaaactcaac 292 |||||||||||||| ||||||||| Sbjct: 58235 aaaaattcttcctctaaactcaac 58212
>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187830 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctttcaaataaaaaacaaaa 72 |||||||||||||||||||| Sbjct: 9133 ctttcaaataaaaaacaaaa 9114
>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete sequence Length = 213801 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aattcttcctcaaaactcaa 291 |||||||||||||||||||| Sbjct: 23072 aattcttcctcaaaactcaa 23053
>dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1967D12, complete sequence Length = 160952 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 attcttcctcaaaactcaactgta 296 |||||||| ||||||||||||||| Sbjct: 8941 attcttccacaaaactcaactgta 8918 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,199,980 Number of Sequences: 3902068 Number of extensions: 6199980 Number of successful extensions: 147119 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 146777 Number of HSP's gapped (non-prelim): 342 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)