>VCAP_HHV6U (P17887) Major capsid protein (MCP)|
          Length = 1345

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = -2

Query: 294 KNHLTQVL----LL*AAIKMSL*PASFSPSRLTCLIQSRETRCQRYKTVTRIPTIELPS 130
           KN  T+VL    ++   I + L P SF  +R   +++  +T CQ+Y    +I T  L S
Sbjct: 544 KNRATEVLCTPRIMIGNIPLPLAPVSFHEARTNQILEHAKTNCQKYDFTLKIVTESLTS 602

>GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (AtGT4)|
          Length = 513

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 24/91 (26%), Positives = 42/91 (46%)
 Frame = -1

Query: 430 SRPPETQKAAATPFREEKRSYHVDSLVQNTSAAVNLPFCNLATSGEKPSDPGVAALSSYK 251
           + PP+   +    +  E R   + S V +T   V LP  +++ +      P +A + S  
Sbjct: 100 AEPPKADVSPNATYTLEPRIAEIPSDVHSTDL-VELPKADISPNATYTLGPRIAEIPS-- 156

Query: 250 DVSLTRFIQPIKADLSDTESGDSMPEIQDGD 158
           D  LT  ++P KAD+S   +    P+I + D
Sbjct: 157 DSHLTDLLEPPKADISPNATYTLGPKITNWD 187

>FPS_DROME (P18106) Tyrosine-protein kinase Fps85D (EC 2.7.10.2) (dFer)|
          Length = 1325

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 24/88 (27%), Positives = 38/88 (43%)
 Frame = -1

Query: 349  QNTSAAVNLPFCNLATSGEKPSDPGVAALSSYKDVSLTRFIQPIKADLSDTESGDSMPEI 170
            Q   +A +  FCN   +G+KP  P V  +S +KD       +    +L +    D   + 
Sbjct: 866  QPAGSAADEQFCNCPPAGQKPVKPSV-QISGHKD----HPFESSSGELDENSDRDIDNDE 920

Query: 169  QDGDPDSDY*ASFKDKRIPLLSFCPSLS 86
            ++ D  SD   S KD    + S   S+S
Sbjct: 921  EEEDSASDDVLSMKDHCYCVPSLAASIS 948

>POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3020

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
 Frame = -1

Query: 448  CSNPIYSRPPETQKAAATPFREEKRSYHVDSLVQNTSAAVNLPFCNLATSGEKPSDPGVA 269
            C+ P    PP        P    KR+  +D    N SAA+       +    KP +   +
Sbjct: 2319 CALPPRGAPP-------VPPPRRKRTIQLDG--SNVSAAL-AALAEKSFPSSKPQEENSS 2368

Query: 268  ALSSYKDVSLTRFIQPIKADLSDTESGDSMP--EIQDGDPD 152
            +       S T  + P     SD+ES  SMP  E + GDPD
Sbjct: 2369 SSGVDTQSSTTSKVPPSPGGESDSESCSSMPPLEGEPGDPD 2409

>PROB_SYNP6 (Q5N0T0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 370

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 104 RKQGYTFILEGSSIVGIRVTVLYLWHRVSRLCIRQ 208
           R+QGY  +L  S  VG+  T L L  R SR+  RQ
Sbjct: 41  RRQGYNVVLVSSGAVGVGCTRLGLRDRPSRIAQRQ 75

>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)|
            (Zona occludens 2 protein) (Tight junction protein 2)
          Length = 1190

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 430  SRPPETQKAAATPFREEKRSYHVDS 356
            SRPPE QKA + P+++ + SY  D+
Sbjct: 1137 SRPPEPQKAPSRPYQDTRGSYGSDA 1161

>POLG_HCVK3 (Q81495) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3020

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
 Frame = -1

Query: 448  CSNPIYSRPPETQKAAATPFREEKRSYHVDSLVQNTSAAVNLPFCNLATSGEKPSDPGVA 269
            C+ P    PP        P    KR+  +D    N SAA+       +    KP +   +
Sbjct: 2319 CALPPKGAPP-------VPPPRRKRTIQLDG--SNVSAAL-AALAEKSFPSSKPQEENSS 2368

Query: 268  ALSSYKDVSLTRFIQPIKADLSDTESGDSMP--EIQDGDPD 152
            +       S    + P   + SD+ES  SMP  E + GDPD
Sbjct: 2369 SSGVDTQSSTASKVLPSPGEESDSESCSSMPPLEGEPGDPD 2409

>DHBC_BACSU (P45744) Isochorismate synthase dhbC (EC 5.4.4.2) (Isochorismate|
           mutase)
          Length = 398

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 25/82 (30%), Positives = 33/82 (40%)
 Frame = -1

Query: 445 SNPIYSRPPETQKAAATPFREEKRSYHVDSLVQNTSAAVNLPFCNLATSGEKPSDPGVAA 266
           S P  + P E Q+ AA      K   H  ++V +  AA   PFC      EKP       
Sbjct: 219 SRPRSNDPVEDQRRAAELLSPAK-DLHEHAVVADAVAAALRPFCRTLEVPEKP------- 270

Query: 265 LSSYKDVSLTRFIQPIKADLSD 200
            S  K  ++      IK +LSD
Sbjct: 271 -SLIKTETMWHLSSVIKGELSD 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,748,706
Number of Sequences: 219361
Number of extensions: 1327465
Number of successful extensions: 3520
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3520
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)