Clone Name | rbastl25c10 |
---|---|
Clone Library Name | barley_pub |
>emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in linkage group 15, complete sequence Length = 212742 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cttcaattgtgtatgaagctcccag 175 |||||||||||||| |||||||||| Sbjct: 176829 cttcaattgtgtataaagctcccag 176853
>gb|AC169675.2| Mus musculus BAC clone RP24-200J3 from chromosome 17, complete sequence Length = 171242 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aactgagaaatagtacaaag 79 |||||||||||||||||||| Sbjct: 5784 aactgagaaatagtacaaag 5803
>gb|AY423026.1| Danio rerio dystrobrevin, beta (DTNB) mRNA, complete cds Length = 3069 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 caggaagcttcagcgcctcc 258 |||||||||||||||||||| Sbjct: 481 caggaagcttcagcgcctcc 462
>emb|CR714811.2|CNS0GEHZ Tetraodon nigroviridis full-length cDNA Length = 835 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tccaggacgccagcgttcat 324 |||||||||||||||||||| Sbjct: 114 tccaggacgccagcgttcat 133
>emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on chromosome 9 Contains a novel gene, complete sequence Length = 125196 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccagcaggcaggaagagcac 224 |||||||||||||||||||| Sbjct: 73809 ccagcaggcaggaagagcac 73790
>emb|CR388171.5| Zebrafish DNA sequence from clone CH211-261O7, complete sequence Length = 145218 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aagggcaacacattatgcat 29 |||||||||||||||||||| Sbjct: 96529 aagggcaacacattatgcat 96510
>gb|AC082650.6| Homo sapiens BAC clone RP11-419L4 from 4, complete sequence Length = 169408 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aaagtctccattcaaaaatt 95 |||||||||||||||||||| Sbjct: 130219 aaagtctccattcaaaaatt 130200
>ref|NM_199709.1| Danio rerio dystrobrevin, beta (dtnb), mRNA Length = 3069 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 caggaagcttcagcgcctcc 258 |||||||||||||||||||| Sbjct: 481 caggaagcttcagcgcctcc 462
>gb|AC084480.1|CBRG02E15 Caenorhabditis briggsae cosmid G02E15, complete sequence Length = 42065 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tctcaaaacatcaaacataa 61 |||||||||||||||||||| Sbjct: 35303 tctcaaaacatcaaacataa 35284
>ref|XM_561185.1| Anopheles gambiae str. PEST ENSANGP00000028652 (ENSANGG00000021845), partial mRNA Length = 378 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ggagttggatgaaaaatttg 291 |||||||||||||||||||| Sbjct: 210 ggagttggatgaaaaatttg 229
>dbj|AP006210.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-449F3, complete sequence Length = 165755 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccagcaggcaggaagagcac 224 |||||||||||||||||||| Sbjct: 149607 ccagcaggcaggaagagcac 149588
>emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on chromosome 17, complete sequence Length = 172696 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aactgagaaatagtacaaag 79 |||||||||||||||||||| Sbjct: 139101 aactgagaaatagtacaaag 139120
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 caccaccgtccggctggcgg 359 |||||||||||||||||||| Sbjct: 2054452 caccaccgtccggctggcgg 2054433
>dbj|AP004968.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43O24, TM0145, complete sequence Length = 134976 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 aaaacatcaaacataactgagaaa 69 ||||||| |||||||||||||||| Sbjct: 59337 aaaacataaaacataactgagaaa 59360
>dbj|AB020873.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium cancer , segment 5/10 Length = 100000 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ccagcaggcaggaagagcac 224 |||||||||||||||||||| Sbjct: 97388 ccagcaggcaggaagagcac 97369 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,842,074 Number of Sequences: 3902068 Number of extensions: 3842074 Number of successful extensions: 72001 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71930 Number of HSP's gapped (non-prelim): 71 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)