ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110278.1| Zea mays CL14707_1 mRNA sequence 268 2e-68
2gb|BT018500.1| Zea mays clone EL01N0427D01.d mRNA sequence 232 9e-58
3ref|XM_469034.1| Oryza sativa (japonica cultivar-group), mRNA 230 3e-57
4dbj|AK102019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 151 3e-33
6gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 151 3e-33
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
8ref|XM_469039.1| Oryza sativa (japonica cultivar-group), mRNA 98 3e-17
9ref|NM_121828.3| Arabidopsis thaliana transcription regulator AT... 88 3e-14
10dbj|AK222056.1| Arabidopsis thaliana mRNA for hypothetical prote... 88 3e-14
11gb|AF370523.1|AF370523 Arabidopsis thaliana Unknown protein (MRG... 88 3e-14
12emb|BX830040.1|CNS0A1I6 Arabidopsis thaliana Full-length cDNA Co... 88 3e-14
13emb|BX829743.1|CNS0A1HT Arabidopsis thaliana Full-length cDNA Co... 88 3e-14
14gb|BT002177.1| Arabidopsis thaliana Unknown protein (At5g18230) ... 88 3e-14
15emb|BX832691.1|CNS09YVD Arabidopsis thaliana Full-length cDNA Co... 74 5e-10
16dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 62 2e-06
17gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 54 4e-04
18ref|XM_657097.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.43
19emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 i... 44 0.43
20ref|XM_689516.1| PREDICTED: Danio rerio similar to kit receptor ... 44 0.43
21ref|NM_131053.1| Danio rerio kit receptor a (kita), mRNA 44 0.43
22gb|AF153446.1|AF153446 Danio rerio kit receptor tyrosine kinase ... 44 0.43
23emb|AL691516.5| Zebrafish DNA sequence from clone BUSM1-116L04 i... 44 0.43
24ref|NM_067134.2| Caenorhabditis elegans NOT-Like (yeast CCR4/NOT... 42 1.7
25emb|AL954352.10| Mouse DNA sequence from clone RP23-159J7 on chr... 42 1.7
26dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.7
27ref|NM_021521.1| Mus musculus mediator of RNA polymerase II tran... 40 6.7
28gb|AC169705.1| Rhesus Macaque BAC CH250-174C17 (Children's Hosp... 40 6.7
29gb|BC057119.1| Mus musculus mediator of RNA polymerase II transc... 40 6.7
30gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.7
31gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complet... 40 6.7
32gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, com... 40 6.7
33emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on ch... 40 6.7
34emb|AL162212.12| Human DNA sequence from clone RP11-209P2 on chr... 40 6.7
35gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, com... 40 6.7
36gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosom... 40 6.7
37emb|AL669941.12| Mouse DNA sequence from clone RP23-288B4 on chr... 40 6.7
38gb|AC090311.12| Homo sapiens chromosome 18, clone RP11-742D12, c... 40 6.7
39gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, comp... 40 6.7
40gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, co... 40 6.7
41gb|AC092040.2| Homo sapiens chromosome 3 clone RP11-129B22, comp... 40 6.7
42gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, compl... 40 6.7
43dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
44gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, comple... 40 6.7
45dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.7
46gb|AF071310.1|AF071310 Mus musculus OPA-containing protein 1 mRN... 40 6.7
47emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4,... 40 6.7
48emb|CT025734.8| Mouse DNA sequence from clone RP24-375J21 on chr... 40 6.7
49emb|AL683892.12| Mouse DNA sequence from clone RP23-440J15 on ch... 40 6.7 
>gb|AY110278.1| Zea mays CL14707_1 mRNA sequence
          Length = 988

 Score =  268 bits (135), Expect = 2e-68
 Identities = 273/319 (85%)
 Strand = Plus / Plus

                                                                       
Query: 143 tagtttggttgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttc 202
           ||||||| ||||||||| || |||||||| ||| ||||||| |||||||||||||| |||
Sbjct: 286 tagtttgtttgtactgatagctcatcctccaggtagttgtactcaaatgtgaagtcattc 345

                                                                       
Query: 203 ttgatcctttggcaccacccatttccatcatctgcgagatgaaaatcaaagtacacgtac 262
           ||||| ||||||||||| ||    ||||| || | || ||| ||||||||||| || || 
Sbjct: 346 ttgattctttggcaccatcctgagccatcctcagtgacatggaaatcaaagtatacatat 405

                                                                       
Query: 263 gatccccgctcatactcatccgtcgtgacctgtggctccacatgccgttggaaccaagta 322
           |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||
Sbjct: 406 gatccccgctcatactcatcagtcgtgacctgtggctccacatgccgctggaaccaggta 465

                                                                       
Query: 323 ttgtacttcctgtgaaatctccatgactgcttttttagttctttagcggccaaatattgt 382
           |||||| ||| ||||||||||||||| ||||| || |||||| |||| ||||| ||||||
Sbjct: 466 ttgtacctccggtgaaatctccatgattgcttcttcagttctctagcagccaagtattgt 525

                                                                       
Query: 383 tggtacgagttctgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcg 442
           || || | |||||| || |||||||| |||||||| ||||| || |||| |||||| |||
Sbjct: 526 tgatatgtgttctgttggtagtagaacgcaaagaacagcatgtcggtagctaatgtgtcg 585

                              
Query: 443 ctaccgagcctttcccaaa 461
           ||||| |  ||||||||||
Sbjct: 586 ctaccaattctttcccaaa 604
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>gb|BT018500.1| Zea mays clone EL01N0427D01.d mRNA sequence
          Length = 1263

 Score =  232 bits (117), Expect = 9e-58
 Identities = 258/305 (84%)
 Strand = Plus / Minus

                                                                       
Query: 143 tagtttggttgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttc 202
           ||||||| ||||||||| || |||||||| | ||||||||| || ||||||||||| |||
Sbjct: 521 tagtttgtttgtactgatagctcatcctccaagaagttgtactcgaatgtgaagtcattc 462

                                                                       
Query: 203 ttgatcctttggcaccacccatttccatcatctgcgagatgaaaatcaaagtacacgtac 262
           ||||| ||||||||||| ||    ||||| || | || ||| ||||||||||| || || 
Sbjct: 461 ttgattctttggcaccatcctgagccatcctcggtgacatggaaatcaaagtatacatat 402

                                                                       
Query: 263 gatccccgctcatactcatccgtcgtgacctgtggctccacatgccgttggaaccaagta 322
           |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||
Sbjct: 401 gatccccgctcatactcatcagtcgtaacctgtggctccacatgccgctggaaccaggta 342

                                                                       
Query: 323 ttgtacttcctgtgaaatctccatgactgcttttttagttctttagcggccaaatattgt 382
           |||||| ||| |||||||||||| || ||||| || | |||| |||| ||||  ||||||
Sbjct: 341 ttgtacctccggtgaaatctccacgattgcttcttcaattctctagcagccatgtattgt 282

                                                                       
Query: 383 tggtacgagttctgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcg 442
           || || | ||||||||| || ||||| |||||||||||||| || |||| |||||| |||
Sbjct: 281 tgatatgtgttctgctggtaatagaacgcaaagaatagcatgtcggtagctaatgtgtcg 222

                
Query: 443 ctacc 447
           |||||
Sbjct: 221 ctacc 217
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>ref|XM_469034.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2662

 Score =  230 bits (116), Expect = 3e-57
 Identities = 277/328 (84%), Gaps = 7/328 (2%)
 Strand = Plus / Minus

                                                                        
Query: 152  tgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttcttgatcctt 211
            ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 2652 tgtactgacagctcatcctcaaggaagttgtactcaaatgtgaagtcgttcttgattctc 2593

                                                                        
Query: 212  tggcaccaccc--at----ttccatcatctgcgagatgaaaatcaaagtacacgtacgat 265
            || ||||| ||  ||    | || ||||||  || ||| |||||||||||||| || |||
Sbjct: 2592 tgacaccatcctgatcctgtgccgtcatctatgacatggaaatcaaagtacacataagat 2533

                                                                        
Query: 266  ccccgctcatactcatccgtcgtgacctgtggctccacatgccgttggaaccaagtattg 325
            ||||||||||||||||| || || || ||||||||||| |||||||||||||||||||||
Sbjct: 2532 ccccgctcatactcatcagttgtaacttgtggctccacgtgccgttggaaccaagtattg 2473

                                                                        
Query: 326  tacttcctgtgaaatctccatgactgcttttttagttctttagcggccaaatattgttgg 385
            ||||| |||||||||||||| || ||||| ||||||||| | ||    ||| |||| |||
Sbjct: 2472 tactttctgtgaaatctccacgattgcttctttagttctctggcacttaaaaattgctgg 2413

                                                                        
Query: 386  tacgagttctgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcgcta 445
            || | ||| |||||||||||||| |||||||| | || ||| |||||||||| ||||| |
Sbjct: 2412 tatgtgttttgctgatagtagaaagcaaagaacaacaaatccgtagataatgaatcgcca 2353

                                        
Query: 446  ccgagcctttccc-aaaggcaggatttg 472
            || |  ||||||| ||||||||||||||
Sbjct: 2352 cccattctttcccaaaaggcaggatttg 2325
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>dbj|AK102019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080H16, full
            insert sequence
          Length = 2754

 Score =  230 bits (116), Expect = 3e-57
 Identities = 277/328 (84%), Gaps = 7/328 (2%)
 Strand = Plus / Minus

                                                                        
Query: 152  tgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttcttgatcctt 211
            ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || 
Sbjct: 2594 tgtactgacagctcatcctcaaggaagttgtactcaaatgtgaagtcgttcttgattctc 2535

                                                                        
Query: 212  tggcaccaccc--at----ttccatcatctgcgagatgaaaatcaaagtacacgtacgat 265
            || ||||| ||  ||    | || ||||||  || ||| |||||||||||||| || |||
Sbjct: 2534 tgacaccatcctgatcctgtgccgtcatctatgacatggaaatcaaagtacacataagat 2475

                                                                        
Query: 266  ccccgctcatactcatccgtcgtgacctgtggctccacatgccgttggaaccaagtattg 325
            ||||||||||||||||| || || || ||||||||||| |||||||||||||||||||||
Sbjct: 2474 ccccgctcatactcatcagttgtaacttgtggctccacgtgccgttggaaccaagtattg 2415

                                                                        
Query: 326  tacttcctgtgaaatctccatgactgcttttttagttctttagcggccaaatattgttgg 385
            ||||| |||||||||||||| || ||||| ||||||||| | ||    ||| |||| |||
Sbjct: 2414 tactttctgtgaaatctccacgattgcttctttagttctctggcacttaaaaattgctgg 2355

                                                                        
Query: 386  tacgagttctgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcgcta 445
            || | ||| |||||||||||||| |||||||| | || ||| |||||||||| ||||| |
Sbjct: 2354 tatgtgttttgctgatagtagaaagcaaagaacaacaaatccgtagataatgaatcgcca 2295

                                        
Query: 446  ccgagcctttccc-aaaggcaggatttg 472
            || |  ||||||| ||||||||||||||
Sbjct: 2294 cccattctttcccaaaaggcaggatttg 2267



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 64   tgttccagattccaacagttccattctgaaaattaca 100
            |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 2690 tgttccagattccagcagttccgttctaaaagttaca 2654
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  151 bits (76), Expect = 3e-33
 Identities = 109/120 (90%)
 Strand = Plus / Minus

                                                                            
Query: 245      aaatcaaagtacacgtacgatccccgctcatactcatccgtcgtgacctgtggctccaca 304
                |||||||||||||| || |||||||||||||||||||| || || || ||||||||||| 
Sbjct: 25058155 aaatcaaagtacacataagatccccgctcatactcatcagttgtaacttgtggctccacg 25058096

                                                                            
Query: 305      tgccgttggaaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttct 364
                |||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct: 25058095 tgccgttggaaccaagtattgtactttctgtgaaatctccacgattgcttctttagttct 25058036



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                            
Query: 276      actcatccgtcgtgacctgtggctccacatgccgttggaaccaagtattgtacttcctgt 335
                ||||||| || || || |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 25089808 actcatcagtggtaacttgtggctccacatgccgttggaaccaagtattgtactttcttt 25089867

                                             
Query: 336      gaaatctccatgactgcttttttagttct 364
                |||||||||| || ||||  |||||||||
Sbjct: 25089868 gaaatctccacgattgctcctttagttct 25089896



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                        
Query: 152      tgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttcttgat 207
                ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 25058425 tgtactgacagctcatcctcaaggaagttgtactcaaatgtgaagtcgttcttgat 25058370



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                            
Query: 395      tgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcgctaccgagcctt 454
                |||||||||||||| |||||||| | || ||| |||||||||| ||||| ||| |  |||
Sbjct: 25057889 tgctgatagtagaaagcaaagaacaacaaatccgtagataatgaatcgccacccattctt 25057830

                                   
Query: 455      tccc-aaaggcaggatttg 472
                |||| ||||||||||||||
Sbjct: 25057829 tcccaaaaggcaggatttg 25057811



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 64       tgttccagattccaacagttccattctgaaaattaca 100
                |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 25058521 tgttccagattccagcagttccgttctaaaagttaca 25058485
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>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
             sequence
          Length = 170020

 Score =  151 bits (76), Expect = 3e-33
 Identities = 109/120 (90%)
 Strand = Plus / Minus

                                                                         
Query: 245   aaatcaaagtacacgtacgatccccgctcatactcatccgtcgtgacctgtggctccaca 304
             |||||||||||||| || |||||||||||||||||||| || || || ||||||||||| 
Sbjct: 89962 aaatcaaagtacacataagatccccgctcatactcatcagttgtaacttgtggctccacg 89903

                                                                         
Query: 305   tgccgttggaaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttct 364
             |||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct: 89902 tgccgttggaaccaagtattgtactttctgtgaaatctccacgattgcttctttagttct 89843



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                          
Query: 276    actcatccgtcgtgacctgtggctccacatgccgttggaaccaagtattgtacttcctgt 335
              ||||||| || || || |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 121615 actcatcagtggtaacttgtggctccacatgccgttggaaccaagtattgtactttcttt 121674

                                           
Query: 336    gaaatctccatgactgcttttttagttct 364
              |||||||||| || ||||  |||||||||
Sbjct: 121675 gaaatctccacgattgctcctttagttct 121703



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                     
Query: 152   tgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttcttgat 207
             ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 90232 tgtactgacagctcatcctcaaggaagttgtactcaaatgtgaagtcgttcttgat 90177



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                         
Query: 395   tgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcgctaccgagcctt 454
             |||||||||||||| |||||||| | || ||| |||||||||| ||||| ||| |  |||
Sbjct: 89696 tgctgatagtagaaagcaaagaacaacaaatccgtagataatgaatcgccacccattctt 89637

                                
Query: 455   tccc-aaaggcaggatttg 472
             |||| ||||||||||||||
Sbjct: 89636 tcccaaaaggcaggatttg 89618



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 64    tgttccagattccaacagttccattctgaaaattaca 100
             |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 90328 tgttccagattccagcagttccgttctaaaagttaca 90292
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  151 bits (76), Expect = 3e-33
 Identities = 109/120 (90%)
 Strand = Plus / Minus

                                                                            
Query: 245      aaatcaaagtacacgtacgatccccgctcatactcatccgtcgtgacctgtggctccaca 304
                |||||||||||||| || |||||||||||||||||||| || || || ||||||||||| 
Sbjct: 25149464 aaatcaaagtacacataagatccccgctcatactcatcagttgtaacttgtggctccacg 25149405

                                                                            
Query: 305      tgccgttggaaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttct 364
                |||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct: 25149404 tgccgttggaaccaagtattgtactttctgtgaaatctccacgattgcttctttagttct 25149345



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                            
Query: 276      actcatccgtcgtgacctgtggctccacatgccgttggaaccaagtattgtacttcctgt 335
                ||||||| || || || |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 25181117 actcatcagtggtaacttgtggctccacatgccgttggaaccaagtattgtactttcttt 25181176

                                             
Query: 336      gaaatctccatgactgcttttttagttct 364
                |||||||||| || ||||  |||||||||
Sbjct: 25181177 gaaatctccacgattgctcctttagttct 25181205



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Minus

                                                                        
Query: 152      tgtactgacagttcatcctcaaggaagttgtattcaaatgtgaagtcgttcttgat 207
                ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 25149734 tgtactgacagctcatcctcaaggaagttgtactcaaatgtgaagtcgttcttgat 25149679



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                            
Query: 395      tgctgatagtagaatgcaaagaatagcatatctgtagataatgtatcgctaccgagcctt 454
                |||||||||||||| |||||||| | || ||| |||||||||| ||||| ||| |  |||
Sbjct: 25149198 tgctgatagtagaaagcaaagaacaacaaatccgtagataatgaatcgccacccattctt 25149139

                                   
Query: 455      tccc-aaaggcaggatttg 472
                |||| ||||||||||||||
Sbjct: 25149138 tcccaaaaggcaggatttg 25149120



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 64       tgttccagattccaacagttccattctgaaaattaca 100
                |||||||||||||| ||||||| |||| ||| |||||
Sbjct: 25149830 tgttccagattccagcagttccgttctaaaagttaca 25149794
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>ref|XM_469039.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2535

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                        
Query: 276  actcatccgtcgtgacctgtggctccacatgccgttggaaccaagtattgtacttcctgt 335
            ||||||| || || || |||||||||||||||||||||||||||||||||||||| || |
Sbjct: 2395 actcatcagtggtaacttgtggctccacatgccgttggaaccaagtattgtactttcttt 2336

                                         
Query: 336  gaaatctccatgactgcttttttagttct 364
            |||||||||| || ||||  |||||||||
Sbjct: 2335 gaaatctccacgattgctcctttagttct 2307
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>ref|NM_121828.3| Arabidopsis thaliana transcription regulator AT5G18230 mRNA, complete
            cds
          Length = 2876

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 314  aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
            |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 2542 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 2483

                                                        
Query: 374  aaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
            | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 2482 agatattgctggtatgagttctgctgatagtagaacgcaaagaa 2439



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 180  tgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
            |||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2685 tgtattcaaatgtgaactcgtttttgatcctttggcacca 2646
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>dbj|AK222056.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-79-B04
          Length = 816

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
           |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 530 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 471

                                                       
Query: 374 aaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
           | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 470 agatattgctggtatgagttctgctgatagtagaacgcaaagaa 427



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 180 tgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
           |||||||||||||||| ||||| |||||||||||||||||
Sbjct: 673 tgtattcaaatgtgaactcgtttttgatcctttggcacca 634
to top
>gb|AF370523.1|AF370523 Arabidopsis thaliana Unknown protein (MRG7.18) mRNA, complete cds
          Length = 2816

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 314  aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
            |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 2541 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 2482

                                                        
Query: 374  aaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
            | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 2481 agatattgctggtatgagttctgctgatagtagaacgcaaagaa 2438



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 180  tgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
            |||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2684 tgtattcaaatgtgaactcgtttttgatcctttggcacca 2645
to top
>emb|BX830040.1|CNS0A1I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZC08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 945

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
           |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 704 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 645

                                                       
Query: 374 aaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
           | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 644 agatattgctggtatgagttctgctgatagtagaacgcaaagaa 601



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 180 tgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
           |||||||||||||||| ||||| |||||||||||||||||
Sbjct: 847 tgtattcaaatgtgaactcgtttttgatcctttggcacca 808
to top
>emb|BX829743.1|CNS0A1HT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 860

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
           |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 525 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 466

                                                       
Query: 374 aaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
           | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 465 agatattgctggtatgagttctgctgatagtagaacgcaaagaa 422



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 180 tgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
           |||||||||||||||| ||||| |||||||||||||||||
Sbjct: 668 tgtattcaaatgtgaactcgtttttgatcctttggcacca 629
to top
>gb|BT002177.1| Arabidopsis thaliana Unknown protein (At5g18230) mRNA, complete cds
          Length = 2599

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 314  aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
            |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 2360 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 2301

                                                        
Query: 374  aaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
            | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 2300 agatattgctggtatgagttctgctgatagtagaacgcaaagaa 2257



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 180  tgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
            |||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2503 tgtattcaaatgtgaactcgtttttgatcctttggcacca 2464
to top
>emb|BX832691.1|CNS09YVD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH8ZG06 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2794

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 89/105 (84%), Gaps = 1/105 (0%)
 Strand = Plus / Minus

                                                                        
Query: 314  aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttcttta-gcggc 372
            |||||||| ||| ||||||||||  ||||||||||||| || || || |||||  || ||
Sbjct: 2531 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctctttttgcagc 2472

                                                         
Query: 373  caaatattgttggtacgagttctgctgatagtagaatgcaaagaa 417
             | |||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 2471 aagatattgctggtatgagttctgctgatagtagaacgcaaagaa 2427



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 179  ttgtattcaaatgtgaagtcgttcttgatcctttggcacca 219
            ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 2679 ttgtattcaaatgtgaactcgtttttgatcctttggcacca 2639
to top
>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7
          Length = 83948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 180   tgtattcaaatgtgaagtcgttcttgatcctttggcacc 218
             |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 45145 tgtattcaaatgtgaactcgtttttgatcctttggcacc 45183



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                         
Query: 314   aaccaagtattgtacttcctgtgaaatctccatgactgcttttttagttctttagcggcc 373
             |||||||| ||| ||||||||||  ||||||||||||| || || || ||||| || || 
Sbjct: 45377 aaccaagtgttgaacttcctgtggtatctccatgactgtttcttcagctcttttgcagca 45436

                                   
Query: 374   aaatattgttggtacgagttct 395
             | |||||| ||||| |||||||
Sbjct: 45437 agatattgctggtatgagttct 45458



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   ctgctgatagtagaatgcaaagaa 417
             ||||||||||||||| ||||||||
Sbjct: 45553 ctgctgatagtagaacgcaaagaa 45576
to top
>gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-167p21, complete
             sequence
          Length = 132340

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 117/147 (79%)
 Strand = Plus / Plus

                                                                         
Query: 241   atgaaaatcaaagtacacgtacgatccccgctcatactcatccgtcgtgacctgtggctc 300
             ||||||||| |||||||| || | |||| ||||||| ||||| || |  || |  |||||
Sbjct: 96336 atgaaaatcgaagtacacatatgttccctgctcataatcatctgtagcaactttgggctc 96395

                                                                         
Query: 301   cacatgccgttggaaccaagtattgtacttcctgtgaaatctccatgactgcttttttag 360
               ||||||| || ||||| ||||| ||||| | |||  ||||||| |||||||| || ||
Sbjct: 96396 ttcatgccgctgaaaccatgtattatactttcggtggtatctccaagactgcttcttgag 96455

                                        
Query: 361   ttctttagcggccaaatattgttggta 387
              || || || |||||||||||||||||
Sbjct: 96456 ctcctttgcagccaaatattgttggta 96482
to top
>ref|XM_657097.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4585.2), mRNA
          Length = 1815

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 296  ggctccacatgccgttggaaccaagtattgtacttcctgtgaaatctcca 345
            |||||| |||||||||||||||| || | |||||   |||||||||||||
Sbjct: 1691 ggctcctcatgccgttggaaccacgtctggtactgtttgtgaaatctcca 1642
to top
>emb|BX276114.6| Zebrafish DNA sequence from clone CH211-176L11 in linkage group 20
              Contains the kit gene for kit receptor, the 3' end of the
              pdgfra gene for platelet derived growth factor receptor
              alpha and a CpG island, complete sequence
          Length = 134212

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 450    gcctttcccaaaggcaggatttgtca 475
              |||||||||||||| |||||||||||
Sbjct: 103200 gcctttcccaaagggaggatttgtca 103175
to top
>ref|XM_689516.1| PREDICTED: Danio rerio similar to kit receptor (LOC573535), partial
           mRNA
          Length = 880

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 450 gcctttcccaaaggcaggatttgtca 475
           |||||||||||||| |||||||||||
Sbjct: 82  gcctttcccaaagggaggatttgtca 57
to top
>ref|NM_131053.1| Danio rerio kit receptor a (kita), mRNA
          Length = 3545

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 450  gcctttcccaaaggcaggatttgtca 475
            |||||||||||||| |||||||||||
Sbjct: 1474 gcctttcccaaagggaggatttgtca 1449
to top
>gb|AF153446.1|AF153446 Danio rerio kit receptor tyrosine kinase mRNA, complete cds
          Length = 3545

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 450  gcctttcccaaaggcaggatttgtca 475
            |||||||||||||| |||||||||||
Sbjct: 1474 gcctttcccaaagggaggatttgtca 1449
to top
>emb|AL691516.5| Zebrafish DNA sequence from clone BUSM1-116L04 in linkage group 20,
             complete sequence
          Length = 80250

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 450   gcctttcccaaaggcaggatttgtca 475
             |||||||||||||| |||||||||||
Sbjct: 52468 gcctttcccaaagggaggatttgtca 52443
to top
>ref|NM_067134.2| Caenorhabditis elegans NOT-Like (yeast CCR4/NOT complex component)
            family member (ntl-3) (ntl-3) mRNA, complete cds
          Length = 2106

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 245  aaatcaaagtacacgtacgatccccgctcatactcatccgt 285
            ||||||||||||||||| | |||| ||||||| || |||||
Sbjct: 2030 aaatcaaagtacacgtatgttccctgctcataatcgtccgt 1990
to top
>emb|AL954352.10| Mouse DNA sequence from clone RP23-159J7 on chromosome 4, complete
             sequence
          Length = 178280

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   actgcttttttagttctttag 368
             |||||||||||||||||||||
Sbjct: 31479 actgcttttttagttctttag 31459
to top
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    cacaaggttacaacttacaac 54
             |||||||||||||||||||||
Sbjct: 18231 cacaaggttacaacttacaac 18251
to top
>ref|NM_021521.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12
            homolog (yeast) (Med12), mRNA
          Length = 6462

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  gccctagtgccctagtttgg 150
            ||||||||||||||||||||
Sbjct: 1025 gccctagtgccctagtttgg 1044
to top
>gb|AC169705.1| Rhesus Macaque  BAC CH250-174C17 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 181644

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aaatttaaattcacccacaa 38
              ||||||||||||||||||||
Sbjct: 171293 aaatttaaattcacccacaa 171274
to top
>gb|BC057119.1| Mus musculus mediator of RNA polymerase II transcription, subunit 12
            homolog (yeast), mRNA (cDNA clone IMAGE:6830443), partial
            cds
          Length = 6642

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  gccctagtgccctagtttgg 150
            ||||||||||||||||||||
Sbjct: 1025 gccctagtgccctagtttgg 1044
to top
>gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 2
             of 3 of the complete sequence
          Length = 277196

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   gcaaagaatagcatatctgt 429
             ||||||||||||||||||||
Sbjct: 22865 gcaaagaatagcatatctgt 22846
to top
>gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complete sequence
          Length = 230128

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    atgcaaagaatagcatatct 427
              ||||||||||||||||||||
Sbjct: 199049 atgcaaagaatagcatatct 199030
to top
>gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, complete sequence
          Length = 181761

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    atatctgtagataatgtatc 441
              ||||||||||||||||||||
Sbjct: 104928 atatctgtagataatgtatc 104909
to top
>emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on chromosome 13 Contains the
             5' end of the ITGBL1 gene for integrin, beta-like 1 (with
             EGF-like repeat domains), complete sequence
          Length = 149143

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   gcaaagaatagcatatctgt 429
             ||||||||||||||||||||
Sbjct: 45762 gcaaagaatagcatatctgt 45743
to top
>emb|AL162212.12| Human DNA sequence from clone RP11-209P2 on chromosome 13 Contains a
             rab9 effector p40 (RAB9P40) pseudogene, complete sequence
          Length = 124418

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    aacagttccattctgaaaat 96
             ||||||||||||||||||||
Sbjct: 56442 aacagttccattctgaaaat 56423
to top
>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence
          Length = 238662

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    atgcaaagaatagcatatct 427
              ||||||||||||||||||||
Sbjct: 206854 atgcaaagaatagcatatct 206873
to top
>gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosome 18, complete sequence
          Length = 195721

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    atgcaaagaatagcatatct 427
              ||||||||||||||||||||
Sbjct: 143531 atgcaaagaatagcatatct 143550
to top
>emb|AL669941.12| Mouse DNA sequence from clone RP23-288B4 on chromosome 11 no genes,
             complete sequence
          Length = 216199

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aacttacaactggggaattt 64
             ||||||||||||||||||||
Sbjct: 22548 aacttacaactggggaattt 22529
to top
>gb|AC090311.12| Homo sapiens chromosome 18, clone RP11-742D12, complete sequence
          Length = 97882

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aatgcacacaacagctctaa 20
             ||||||||||||||||||||
Sbjct: 96961 aatgcacacaacagctctaa 96980
to top
>gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, complete sequence
          Length = 163209

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aattgagcaaacatttttct 128
              ||||||||||||||||||||
Sbjct: 142292 aattgagcaaacatttttct 142273
to top
>gb|AC064800.8| Homo sapiens chromosome 18, clone CTD-2001I24, complete sequence
          Length = 131409

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aatgcacacaacagctctaa 20
             ||||||||||||||||||||
Sbjct: 40725 aatgcacacaacagctctaa 40744
to top
>gb|AC092040.2| Homo sapiens chromosome 3 clone RP11-129B22, complete sequence
          Length = 171177

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   cctagtgccctagtttggtt 152
             ||||||||||||||||||||
Sbjct: 93018 cctagtgccctagtttggtt 93037
to top
>gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, complete sequence
          Length = 270578

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   atatctgtagataatgtatc 441
             ||||||||||||||||||||
Sbjct: 33008 atatctgtagataatgtatc 33027
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      aacagctctaaatttaaatt 29
               ||||||||||||||||||||
Sbjct: 2028326 aacagctctaaatttaaatt 2028345
to top
>gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, complete sequence
          Length = 187652

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   accaagtattgtacttcctg 334
             ||||||||||||||||||||
Sbjct: 38212 accaagtattgtacttcctg 38231
to top
>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
              sequence
          Length = 227942

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aaatttaaattcacccacaa 38
              ||||||||||||||||||||
Sbjct: 156849 aaatttaaattcacccacaa 156830
to top
>gb|AF071310.1|AF071310 Mus musculus OPA-containing protein 1 mRNA, complete cds
          Length = 6478

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  gccctagtgccctagtttgg 150
            ||||||||||||||||||||
Sbjct: 1041 gccctagtgccctagtttgg 1060
to top
>emb|AL662985.3|OSJN00189 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095H06,
             complete sequence
          Length = 126447

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aacagctctaaatttaaatt 29
             ||||||||||||||||||||
Sbjct: 44986 aacagctctaaatttaaatt 45005
to top
>emb|CT025734.8| Mouse DNA sequence from clone RP24-375J21 on chromosome 14, complete
              sequence
          Length = 187933

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     tgttccagattccaacagtt 83
              ||||||||||||||||||||
Sbjct: 169002 tgttccagattccaacagtt 169021
to top
>emb|AL683892.12| Mouse DNA sequence from clone RP23-440J15 on chromosome X, complete
             sequence
          Length = 136809

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gccctagtgccctagtttgg 150
             ||||||||||||||||||||
Sbjct: 17016 gccctagtgccctagtttgg 17035


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,807,851
Number of Sequences: 3902068
Number of extensions: 4807851
Number of successful extensions: 90424
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90188
Number of HSP's gapped (non-prelim): 226
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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