>NUOB_AQUAE (O67334) NADH-quinone oxidoreductase chain B (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain B) (NDH-1, chain B)
          Length = 179

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = -3

Query: 393 ASPKEAEGPPLLVKLRTDVNRVTPMVETVLEKL--PRWCAPFGKSTS 259
           ASP++A+   +L+   T VN+V PM++ + +++  P+WC   G   S
Sbjct: 59  ASPRQAD---VLIVAGTVVNKVAPMLKLIWDQMPDPKWCISMGGCAS 102

>RA51B_MOUSE (O35719) DNA repair protein RAD51 homolog 2 (R51H2) (RAD51-like|
           protein 1)
          Length = 350

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 295 STLVCALRQVDISLHAGVPDRSSSQYLGDPHCVPQHFSLL 176
           ST +CAL   D +LH GVP  S ++  G P C    F ++
Sbjct: 84  STTLCAL---DEALHGGVPCGSLTEITGPPGCGKTQFCIM 120

>GABD_DEIRA (O32507) Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)|
           (SSDH)
          Length = 477

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 191 LGNAMRVA*IL-TGRAVRNASV*GDVDLPKGAHQRGSFSRTVSTIGVTLFTS 343
           L  A RVA  L TG    N       DLP G  +R  F R +S++G+  FT+
Sbjct: 408 LDRAQRVAERLDTGMVWINHPTSSAADLPFGGVKRSGFGRELSSMGMLEFTN 459


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,557,467
Number of Sequences: 219361
Number of extensions: 1048837
Number of successful extensions: 2439
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2437
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)