Clone Name | rbastl25b09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185497 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 atgttcagattgtaattgtgtt 277 |||||||||||||||||||||| Sbjct: 35820 atgttcagattgtaattgtgtt 35799
>gb|AC087821.5| Homo sapiens chromosome 8, clone RP11-108A14, complete sequence Length = 167949 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 tctatcatgcagatggctagtaggta 103 ||||||| |||||||||||||||||| Sbjct: 70066 tctatcaggcagatggctagtaggta 70091
>gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66 of 83 of the complete sequence Length = 294542 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 atgttcagattgtaattgtgtt 277 |||||||||||||||||||||| Sbjct: 286347 atgttcagattgtaattgtgtt 286326
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 tcctgaatattgtcttcagtc 336 ||||||||||||||||||||| Sbjct: 3158977 tcctgaatattgtcttcagtc 3158957
>gb|AC160823.2| Xenopus tropicalis BMP4 gene, complete cds, complete sequence Length = 67072 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 atgttcagattgtaattgtgt 276 ||||||||||||||||||||| Sbjct: 31689 atgttcagattgtaattgtgt 31669
>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194234 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 agatggctagtaggtagattaata 111 ||||||||||||||| |||||||| Sbjct: 14767 agatggctagtaggttgattaata 14790
>gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, complete sequence Length = 180339 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 agatggctagtaggtagattaata 111 ||||||||||||||| |||||||| Sbjct: 76544 agatggctagtaggttgattaata 76521
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aataaaagtatacgttacaa 177 |||||||||||||||||||| Sbjct: 708282 aataaaagtatacgttacaa 708263
>gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complete sequence Length = 57660 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tgttcagattgtaatgaatt 312 |||||||||||||||||||| Sbjct: 49076 tgttcagattgtaatgaatt 49095 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,795,709 Number of Sequences: 3902068 Number of extensions: 2795709 Number of successful extensions: 51369 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51342 Number of HSP's gapped (non-prelim): 27 length of query: 366 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 344 effective length of database: 17,147,199,772 effective search space: 5898636721568 effective search space used: 5898636721568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)