>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +1

Query: 178 NQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSG 357
           +Q   +  P  QP+   P + A  HHH+ +  +SS+ V P+   S TS   + S    + 
Sbjct: 96  SQSPTSPHPSNQPAMLSPSTAASQHHHHHS-SSSSYAVSPTSPTSPTSSGPIGSNFDSAS 154

Query: 358 THSG 369
            H+G
Sbjct: 155 EHNG 158

>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)|
          Length = 1387

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 286 GVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCS 402
           GV PS SAS ++  S+S G  LS + S S+ ++   GC+
Sbjct: 716 GVAPSTSASFSNTASISFGGTLSTSSSFSSAASISFGCA 754

>P3F2B_XENLA (P70030) POU domain, class 3, transcription factor 2-B|
           (Transcription factor POU3-B) (XLPOU3B)
          Length = 385

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
 Frame = +1

Query: 229 PGSGALMHHHN-QT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPS 393
           PGSG  MHHH  +  H   HG       S T         L  G H  S    P S
Sbjct: 154 PGSGQGMHHHGLRDSHDDHHGDHGHQQPSQTQQQQQQHSQLQGGHHDHSDEDTPTS 209

>RPGR_MOUSE (Q9R0X5) X-linked retinitis pigmentosa GTPase regulator (mRpgr)|
          Length = 1001

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 404 DEQPDGGAETVDPECVPESKAPEDMDITDVK 312
           +E+ +G  E V+   +PE++  E +DITD K
Sbjct: 847 EERKEGEKEIVEEGSIPETEGSETIDITDEK 877

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = +1

Query: 190 ATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSG 369
           A++ P    ++  P S A     + +  +SS    PS SAS +S  S S+ +  + + S 
Sbjct: 456 ASSSPSSSAASSSPSSSAASSSPSSSAASSS----PSSSASSSSSPSSSASSSSAPSSSA 511

Query: 370 STVSAPPSGCSS 405
           S+ SAP S  SS
Sbjct: 512 SSSSAPSSSASS 523

>CLUS_RAT (P05371) Clusterin precursor (Sulfated glycoprotein 2) (SGP-2)|
           (Dimeric acid glycoprotein) (DAG) (Testosterone
           repressed prostate message 2) (TRPM-2) [Contains:
           Clusterin beta chain; Clusterin alpha chain]
          Length = 447

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
 Frame = -2

Query: 370 IQNACLRAKHQKTWISQTS---RTLSSSV*HHARKHVMSGYDDA--SEPRYLAY-----E 221
           IQNA    KH KT I +T+   ++L +S+   A+K      DD   SE +  A+     E
Sbjct: 45  IQNAVQGVKHIKTLIEKTNAERKSLLNSL-EEAKKKKEGALDDTRDSEMKLKAFPEVCNE 103

Query: 220 LMVAIVGELLPFLGSSCSNSILFLC 146
            M+A+  E  P L  +C      +C
Sbjct: 104 TMMALWEECKPCLKHTCMKFYARVC 128

>UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (Perlecan homolog)|
            (Uncoordinated protein 52)
          Length = 3375

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 7    N*NSPHSCSQFRSTVVCQHHTKNKLIVRC 93
            N +SP  C  F   ++C+H+T+     RC
Sbjct: 1014 NNHSPRGCDSFGRCLLCEHNTEGTHCERC 1042

>L_EBOSM (Q66802) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2210

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 18   SAFMFPVPFDSRVPTSHQKQTDSTLHGSSS*QSGTMYAVWFSWQRNRI 161
            S +  P    S +P +H+ + +  L+ S+S  +   +  WFS Q+NRI
Sbjct: 1867 SGYTTPRMLLSVMPRTHRGELEVILNNSASQITDITHRDWFSNQKNRI 1914

>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2|
          Length = 1067

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +1

Query: 229 PGSGALMHHHNQ---T*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSG 396
           P   + MHHH Q     H  +H    + + +  +  + ++GA  +G+ SGS  SAP  G
Sbjct: 488 PPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGG 546

>POL_HV2RO (P04584) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix|
           protein p17 (MA); Capsid protein p24 (CA); p2 spacer
           peptide; Nucleocapsid protein* (NC*); Transframe peptide
           (TF) (p6 pol); Protease (EC 3.4.23.47) (Retropepsin)
           (PR); Reverse trans
          Length = 1463

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 51  RVPTSHQKQTDSTLHGSSS*QSGTMYAVWFSWQRNRIELLQEEPR 185
           R P+S    T+ST  GSSS  +G +YA     +R   E +Q   R
Sbjct: 446 RGPSSAGADTNSTPSGSSSGSTGEIYAAREKTERAERETIQGSDR 490

>ARFD_ARATH (Q9ZTX9) Auxin response factor 4|
          Length = 788

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 153 SFAMKTTPHTWCQTASCCSRATYYQFVFGVMLAHDC 46
           S ++K TPH +C+T +    +T+  F      A DC
Sbjct: 167 SSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,712,523
Number of Sequences: 219361
Number of extensions: 1127693
Number of successful extensions: 3054
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3042
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)