ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478769.1| Oryza sativa (japonica cultivar-group), mRNA 220 3e-54
2ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA 190 2e-45
3dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 2e-45
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
5dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
6gb|AY107748.1| Zea mays PCO123054 mRNA sequence 176 4e-41
7gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete... 46 0.090
8gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, com... 44 0.36
9gb|AC164531.9| Mus musculus chromosome 8, clone RP24-238M4, comp... 44 0.36
10gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, com... 44 0.36
11gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, compl... 44 0.36
12gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, comp... 44 0.36
13gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 ma... 44 0.36
14gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, co... 44 0.36
15gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Can... 44 0.36
16gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, com... 42 1.4
17gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, com... 42 1.4
18gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, comp... 42 1.4
19ref|XM_950256.1| Theileria annulata strain Ankara hypothetical p... 42 1.4
20gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, compl... 42 1.4
21gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, com... 42 1.4
22gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosom... 42 1.4
23gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Can... 42 1.4
24gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P... 42 1.4
25gb|AC091534.7| Homo sapiens 12 BAC RP11-404O18 (Roswell Park Can... 42 1.4
26dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 1.4
27emb|AL672221.14| Mouse DNA sequence from clone RP23-57B14 on chr... 42 1.4
28ref|NM_115484.2| Arabidopsis thaliana unknown protein AT3G56260 ... 40 5.6
29gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, com... 40 5.6
30gb|AC158136.11| Mus musculus chromosome 7, clone RP23-58I15, com... 40 5.6
31gb|AC145817.1| Pan troglodytes BAC clone RP43-6C4 from 7, comple... 40 5.6
32gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete s... 40 5.6
33emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on ch... 40 5.6
34emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chr... 40 5.6
35gb|AC108510.3| Homo sapiens chromosome 7 clone RP11-98O9, comple... 40 5.6
36emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, B... 40 5.6
37gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, c... 40 5.6
38gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, com... 40 5.6
39gb|AC104260.5| Homo sapiens chromosome 15, clone CTD-2536I1, com... 40 5.6
40gb|AF399011.1| Pseudomonas phage phiKZ, complete genome 40 5.6
41gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 5.6
42gb|DQ163920.1| Bacteriophage SD1-M, complete genome 40 5.6
43gb|AF077255.1|AF077255 Littorina scutulata isolate Scut18 cytoch... 40 5.6
44gb|AF077254.1|AF077254 Littorina scutulata isolate Scut17 cytoch... 40 5.6
45gb|AF077253.1|AF077253 Littorina scutulata isolate Scut16 cytoch... 40 5.6
46gb|AF077251.1|AF077251 Littorina scutulata isolate Scut14 cytoch... 40 5.6
47gb|AF077249.1|AF077249 Littorina scutulata isolate Scut12 cytoch... 40 5.6
48gb|AF077248.1|AF077248 Littorina scutulata isolate Scut11 cytoch... 40 5.6
49gb|AF077247.1|AF077247 Littorina scutulata isolate Scut10 cytoch... 40 5.6
50gb|AF077246.1|AF077246 Littorina scutulata isolate Scut9 cytochr... 40 5.6
51gb|AF077244.1|AF077244 Littorina scutulata isolate Scut7 cytochr... 40 5.6
52gb|AF077243.1|AF077243 Littorina scutulata isolate Scut6 cytochr... 40 5.6
53gb|AF077242.1|AF077242 Littorina scutulata isolate Scut5 cytochr... 40 5.6
54gb|AF077239.1|AF077239 Littorina scutulata isolate Scut2 cytochr... 40 5.6
55gb|AF077238.1|AF077238 Littorina scutulata isolate Scut1 cytochr... 40 5.6
56gb|AF023609.1|AF023609 Littorina subrotundata cytochrome b gene,... 40 5.6
57gb|AF023608.1|AF023608 Littorina subrotundata cytochrome b gene,... 40 5.6
58gb|AF023607.1|AF023607 Littorina subrotundata cytochrome b gene,... 40 5.6
59emb|AL357752.19| Human DNA sequence from clone RP13-26D14 on chr... 40 5.6
60gb|U89697.1|OTU89697 Oxytricha trifallax DNA polymerase alpha ge... 40 5.6
61gb|U46797.1|LHU46797 Littorina horikawai cytochrome b gene, mito... 40 5.6
62emb|AL671331.6| Mouse DNA sequence from clone RP23-126C18 on chr... 40 5.6 
>ref|XM_478769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2997

 Score =  220 bits (111), Expect = 3e-54
 Identities = 243/287 (84%)
 Strand = Plus / Minus

                                                                        
Query: 120  ctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcct 179
            ||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||
Sbjct: 2997 ctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcct 2938

                                                                        
Query: 180  gaagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatctt 239
            ||||||||||||||| |||||| ||| ||| |||||  | ||  |||| ||||| |||||
Sbjct: 2937 gaagctgaatatatcggttatttgatacgagtgcggctgtggctcatcgtgaactatctt 2878

                                                                        
Query: 240  ttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctgg 299
            ||||||||| |||| ||||||||| || || | ||| |||||||| || ||||||| |||
Sbjct: 2877 ttcgtactcggaggaatggagaccgccgtaaacttgaatgctaagaattttcttttgtgg 2818

                                                                        
Query: 300  tgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctcccc 359
            |||    || ||||||| |||||  |||||||| |||||||| || || || || |||| 
Sbjct: 2817 tgcattaactttgacatgattattgaagaactcaatcaactcctctttattgagatccct 2758

                                                           
Query: 360  cagtgcagcaacctctgcttcctttctatcaaatttcagtgttcctt 406
            ||||||||||||||| || || ||||||||||||||||| |||||||
Sbjct: 2757 cagtgcagcaacctccgcctcttttctatcaaatttcagagttcctt 2711
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>ref|XM_478770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3199

 Score =  190 bits (96), Expect = 2e-45
 Identities = 246/296 (83%)
 Strand = Plus / Minus

                                                                        
Query: 121  tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 180
            |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 3107 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 3048

                                                                        
Query: 181  aagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatcttt 240
            ||| |||||||||| |||||| |||  ||||  ||  | ||  |||| || || ||||||
Sbjct: 3047 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 2988

                                                                        
Query: 241  tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 300
            |||||||| |||| ||||||||| || || | ||| || || || |||||||||| ||||
Sbjct: 2987 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 2928

                                                                        
Query: 301  gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 360
            ||    || ||||||| ||| |  ||||||||||||||||| || |||||||| |||| |
Sbjct: 2927 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 2868

                                                                    
Query: 361  agtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctc 416
            ||||||||||||||  |||| |||| |||||||||||| |||||||  ||||||||
Sbjct: 2867 agtgcagcaacctccacttcttttcgatcaaatttcagagttccttccgaaatctc 2812
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>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full
            insert sequence
          Length = 3200

 Score =  190 bits (96), Expect = 2e-45
 Identities = 246/296 (83%)
 Strand = Plus / Minus

                                                                        
Query: 121  tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 180
            |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 3107 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 3048

                                                                        
Query: 181  aagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatcttt 240
            ||| |||||||||| |||||| |||  ||||  ||  | ||  |||| || || ||||||
Sbjct: 3047 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 2988

                                                                        
Query: 241  tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 300
            |||||||| |||| ||||||||| || || | ||| || || || |||||||||| ||||
Sbjct: 2987 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 2928

                                                                        
Query: 301  gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 360
            ||    || ||||||| ||| |  ||||||||||||||||| || |||||||| |||| |
Sbjct: 2927 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 2868

                                                                    
Query: 361  agtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctc 416
            ||||||||||||||  |||| |||| |||||||||||| |||||||  ||||||||
Sbjct: 2867 agtgcagcaacctccacttcttttcgatcaaatttcagagttccttccgaaatctc 2812
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  188 bits (95), Expect = 1e-44
 Identities = 215/255 (84%)
 Strand = Plus / Plus

                                                                            
Query: 119      cctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcc 178
                |||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||
Sbjct: 22885749 cctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcc 22885808

                                                                            
Query: 179      tgaagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatct 238
                |||||||||||||||| |||||| ||| ||| |||||  | ||  |||| ||||| ||||
Sbjct: 22885809 tgaagctgaatatatcggttatttgatacgagtgcggctgtggctcatcgtgaactatct 22885868

                                                                            
Query: 239      tttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctg 298
                |||||||||| |||| ||||||||| || || | ||| |||||||| || ||||||| ||
Sbjct: 22885869 tttcgtactcggaggaatggagaccgccgtaaacttgaatgctaagaattttcttttgtg 22885928

                                                                            
Query: 299      gtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccc 358
                ||||    || ||||||| |||||  |||||||| |||||||| || || || || ||||
Sbjct: 22885929 gtgcattaactttgacatgattattgaagaactcaatcaactcctctttattgagatccc 22885988

                               
Query: 359      ccagtgcagcaacct 373
                 ||||||||||||||
Sbjct: 22885989 tcagtgcagcaacct 22886003



 Score =  161 bits (81), Expect = 2e-36
 Identities = 210/253 (83%)
 Strand = Plus / Plus

                                                                            
Query: 121      tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 180
                |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 22902280 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 22902339

                                                                            
Query: 181      aagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatcttt 240
                ||| |||||||||| |||||| |||  ||||  ||  | ||  |||| || || ||||||
Sbjct: 22902340 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 22902399

                                                                            
Query: 241      tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 300
                |||||||| |||| ||||||||| || || | ||| || || || |||||||||| ||||
Sbjct: 22902400 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 22902459

                                                                            
Query: 301      gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 360
                ||    || ||||||| ||| |  ||||||||||||||||| || |||||||| |||| |
Sbjct: 22902460 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 22902519

                             
Query: 361      agtgcagcaacct 373
                |||||||||||||
Sbjct: 22902520 agtgcagcaacct 22902532



 Score =  151 bits (76), Expect = 2e-33
 Identities = 214/260 (82%)
 Strand = Plus / Plus

                                                                            
Query: 114      gttgtcctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcga 173
                |||| |||||| |||||||||||||  ||| |||||||||||||||||||||||||||||
Sbjct: 22922081 gttgacctataacttcatctgaccaatacctcctttgaatgaaccatataaaggtctcga 22922140

                                                                            
Query: 174      cctcctgaagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaac 233
                ||||||||||||||||||||| |||||| |||  ||||||||  | ||  | || |||||
Sbjct: 22922141 cctcctgaagctgaatatatcggttatttgataggaatgcggctgtggctcgtcgtgaac 22922200

                                                                            
Query: 234      aatcttttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttctt 293
                 | ||||||||||||   ||  |||||||  || |||| |||||| || || ||||||||
Sbjct: 22922201 taccttttcgtactcgttggtgtggagacggccgtagacttgtatactgagtatcttctt 22922260

                                                                            
Query: 294      ttctggtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaag 353
                |  ||||||    || ||||||| |||||| |||||||| |||| ||| || ||||| ||
Sbjct: 22922261 tcgtggtgcattaactttgacatgattatcgaagaactcaatcagctcctctttcttgag 22922320

                                    
Query: 354      ctcccccagtgcagcaacct 373
                 |||| ||||||||||||||
Sbjct: 22922321 atccctcagtgcagcaacct 22922340



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 382      tttctatcaaatttcagtgttccttgagaaatctc 416
                ||||||||||||||||| ||||||| ||| |||||
Sbjct: 22922419 tttctatcaaatttcagagttccttcagagatctc 22922453



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 382      tttctatcaaatttcagtgttcctt 406
                ||||||||||||||||| |||||||
Sbjct: 22886083 tttctatcaaatttcagagttcctt 22886107



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 377      cttcctttctatcaaatttcagtgttccttgagaaatctc 416
                |||| |||| |||||||||||| |||||||  ||||||||
Sbjct: 22902609 cttcttttcgatcaaatttcagagttccttccgaaatctc 22902648
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>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1019_E02
          Length = 121607

 Score =  188 bits (95), Expect = 1e-44
 Identities = 215/255 (84%)
 Strand = Plus / Plus

                                                                         
Query: 119   cctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcc 178
             |||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||
Sbjct: 79016 cctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcc 79075

                                                                         
Query: 179   tgaagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatct 238
             |||||||||||||||| |||||| ||| ||| |||||  | ||  |||| ||||| ||||
Sbjct: 79076 tgaagctgaatatatcggttatttgatacgagtgcggctgtggctcatcgtgaactatct 79135

                                                                         
Query: 239   tttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctg 298
             |||||||||| |||| ||||||||| || || | ||| |||||||| || ||||||| ||
Sbjct: 79136 tttcgtactcggaggaatggagaccgccgtaaacttgaatgctaagaattttcttttgtg 79195

                                                                         
Query: 299   gtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccc 358
             ||||    || ||||||| |||||  |||||||| |||||||| || || || || ||||
Sbjct: 79196 gtgcattaactttgacatgattattgaagaactcaatcaactcctctttattgagatccc 79255

                            
Query: 359   ccagtgcagcaacct 373
              ||||||||||||||
Sbjct: 79256 tcagtgcagcaacct 79270



 Score =  161 bits (81), Expect = 2e-36
 Identities = 210/253 (83%)
 Strand = Plus / Plus

                                                                         
Query: 121   tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 180
             |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||
Sbjct: 95547 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 95606

                                                                         
Query: 181   aagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatcttt 240
             ||| |||||||||| |||||| |||  ||||  ||  | ||  |||| || || ||||||
Sbjct: 95607 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 95666

                                                                         
Query: 241   tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 300
             |||||||| |||| ||||||||| || || | ||| || || || |||||||||| ||||
Sbjct: 95667 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 95726

                                                                         
Query: 301   gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 360
             ||    || ||||||| ||| |  ||||||||||||||||| || |||||||| |||| |
Sbjct: 95727 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 95786

                          
Query: 361   agtgcagcaacct 373
             |||||||||||||
Sbjct: 95787 agtgcagcaacct 95799



 Score =  151 bits (76), Expect = 2e-33
 Identities = 214/260 (82%)
 Strand = Plus / Plus

                                                                          
Query: 114    gttgtcctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcga 173
              |||| |||||| |||||||||||||  ||| |||||||||||||||||||||||||||||
Sbjct: 115348 gttgacctataacttcatctgaccaatacctcctttgaatgaaccatataaaggtctcga 115407

                                                                          
Query: 174    cctcctgaagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaac 233
              ||||||||||||||||||||| |||||| |||  ||||||||  | ||  | || |||||
Sbjct: 115408 cctcctgaagctgaatatatcggttatttgataggaatgcggctgtggctcgtcgtgaac 115467

                                                                          
Query: 234    aatcttttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttctt 293
               | ||||||||||||   ||  |||||||  || |||| |||||| || || ||||||||
Sbjct: 115468 taccttttcgtactcgttggtgtggagacggccgtagacttgtatactgagtatcttctt 115527

                                                                          
Query: 294    ttctggtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaag 353
              |  ||||||    || ||||||| |||||| |||||||| |||| ||| || ||||| ||
Sbjct: 115528 tcgtggtgcattaactttgacatgattatcgaagaactcaatcagctcctctttcttgag 115587

                                  
Query: 354    ctcccccagtgcagcaacct 373
               |||| ||||||||||||||
Sbjct: 115588 atccctcagtgcagcaacct 115607



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 382    tttctatcaaatttcagtgttccttgagaaatctc 416
              ||||||||||||||||| ||||||| ||| |||||
Sbjct: 115686 tttctatcaaatttcagagttccttcagagatctc 115720



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 382   tttctatcaaatttcagtgttcctt 406
             ||||||||||||||||| |||||||
Sbjct: 79350 tttctatcaaatttcagagttcctt 79374



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 377   cttcctttctatcaaatttcagtgttccttgagaaatctc 416
             |||| |||| |||||||||||| |||||||  ||||||||
Sbjct: 95876 cttcttttcgatcaaatttcagagttccttccgaaatctc 95915
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>gb|AY107748.1| Zea mays PCO123054 mRNA sequence
          Length = 1762

 Score =  176 bits (89), Expect = 4e-41
 Identities = 245/297 (82%)
 Strand = Plus / Minus

                                                                        
Query: 120  ctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcct 179
            ||||||||||||||||||| | || ||  ||||||| ||||||||||| |||||||||||
Sbjct: 1677 ctatagcttcatctgaccaacgcctcccctgaatgatccatataaaggcctcgacctcct 1618

                                                                        
Query: 180  gaagctgaatatatcagttattcgatgcgaatgcgggggcggaacatcatgaacaatctt 239
            |||||   | |||||||||||   |  |||  |||| |||||| |||  || || ||  |
Sbjct: 1617 gaagccataaatatcagttatctcacacgacggcggtggcggagcattttgcactatggt 1558

                                                                        
Query: 240  ttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctgg 299
            ||||||||| |  | |||||||||||| || | |||||| ||||| |||||||||| |||
Sbjct: 1557 ttcgtactcggcagaatggagaccaccgtacacttgtatactaagaatcttcttttgtgg 1498

                                                                        
Query: 300  tgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctcccc 359
            |||   ||||||||||| || ||  |||||  ||| ||||||||||||||| ||||||| 
Sbjct: 1497 tgcattgaccttgacatgatcattgaagaagcctaccaactcttccttcttgagctccct 1438

                                                                     
Query: 360  cagtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctc 416
            ||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||
Sbjct: 1437 cagtgcagcaacctctgcttcttttctatcaaatttgagggttccttcagaaatctc 1381
to top
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence
          Length = 210916

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 339    ctcttccttcttaagctcccccagtgc 365
              |||||||||||| ||||||||||||||
Sbjct: 122213 ctcttccttcttcagctcccccagtgc 122187
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>gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, complete sequence
          Length = 164098

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 365  cagcaacctctgcttcctttct 386
            ||||||||||||||||||||||
Sbjct: 2023 cagcaacctctgcttcctttct 2002
to top
>gb|AC164531.9| Mus musculus chromosome 8, clone RP24-238M4, complete sequence
          Length = 163075

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 365   cagcaacctctgcttcctttct 386
             ||||||||||||||||||||||
Sbjct: 14178 cagcaacctctgcttcctttct 14199
to top
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence
          Length = 178426

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 365    cagcaacctctgcttcctttct 386
              ||||||||||||||||||||||
Sbjct: 134685 cagcaacctctgcttcctttct 134664
to top
>gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, complete sequence
          Length = 239452

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 365    cagcaacctctgcttcctttct 386
              ||||||||||||||||||||||
Sbjct: 197254 cagcaacctctgcttcctttct 197275
to top
>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence
          Length = 196119

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 365    cagcaacctctgcttcctttct 386
              ||||||||||||||||||||||
Sbjct: 140150 cagcaacctctgcttcctttct 140129
to top
>gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 map mi398, complete
             sequence
          Length = 96371

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 377   cttcctttctatcaaatttcagtgtt 402
             ||||||||||| ||||||||||||||
Sbjct: 80396 cttcctttctagcaaatttcagtgtt 80371
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>gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, complete sequence
          Length = 182668

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 365   cagcaacctctgcttcctttct 386
             ||||||||||||||||||||||
Sbjct: 90904 cagcaacctctgcttcctttct 90925



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 365   cagcaacctctgcttcctttct 386
             ||||||||||||||||||||||
Sbjct: 37719 cagcaacctctgcttcctttct 37740
to top
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 225736

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 77     aaaatacaagttgaatgtaaataaga 102
              |||||||||||||||||||| |||||
Sbjct: 189037 aaaatacaagttgaatgtaattaaga 189062
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>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence
          Length = 217836

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 185    tgaatatatcagttattcgat 205
              |||||||||||||||||||||
Sbjct: 108877 tgaatatatcagttattcgat 108857
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>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence
          Length = 174995

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 366    agcaacctctgcttcctttct 386
              |||||||||||||||||||||
Sbjct: 146538 agcaacctctgcttcctttct 146558
to top
>gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, complete sequence
          Length = 183596

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   tgaatatatcagttattcgat 205
             |||||||||||||||||||||
Sbjct: 45647 tgaatatatcagttattcgat 45627
to top
>ref|XM_950256.1| Theileria annulata strain Ankara hypothetical protein (TA18800)
            partial mRNA
          Length = 2007

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 378  ttcctttctatcaaatttcag 398
            |||||||||||||||||||||
Sbjct: 1496 ttcctttctatcaaatttcag 1516
to top
>gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, complete sequence
          Length = 186208

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 185  tgaatatatcagttattcgat 205
            |||||||||||||||||||||
Sbjct: 6103 tgaatatatcagttattcgat 6123
to top
>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence
          Length = 238662

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     catttgtcccacacattattttctt 71
              ||||||||||||||||| |||||||
Sbjct: 161413 catttgtcccacacattgttttctt 161437
to top
>gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosome 18, complete
             sequence
          Length = 195721

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    catttgtcccacacattattttctt 71
             ||||||||||||||||| |||||||
Sbjct: 98090 catttgtcccacacattgttttctt 98114
to top
>gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 139802

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 338    actcttccttcttaagctccc 358
              |||||||||||||||||||||
Sbjct: 106112 actcttccttcttaagctccc 106132
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>gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P13, complete sequence
          Length = 150913

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 185    tgaatatatcagttattcgat 205
              |||||||||||||||||||||
Sbjct: 108966 tgaatatatcagttattcgat 108986
to top
>gb|AC091534.7| Homo sapiens 12 BAC RP11-404O18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185576

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     aaaatacaagttgaatgtaaa 97
              |||||||||||||||||||||
Sbjct: 180277 aaaatacaagttgaatgtaaa 180297
to top
>dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04E21, TM0336,
           complete sequence
          Length = 113233

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 118 tcctatagcttcatctgacca 138
           |||||||||||||||||||||
Sbjct: 799 tcctatagcttcatctgacca 779
to top
>emb|AL672221.14| Mouse DNA sequence from clone RP23-57B14 on chromosome X, complete
             sequence
          Length = 189048

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 382   tttctatcaaatttcagtgtt 402
             |||||||||||||||||||||
Sbjct: 47938 tttctatcaaatttcagtgtt 47918
to top
>ref|NM_115484.2| Arabidopsis thaliana unknown protein AT3G56260 mRNA, complete cds
          Length = 1010

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 62 ttattttctttaggaaaaat 81
          ||||||||||||||||||||
Sbjct: 26 ttattttctttaggaaaaat 7
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>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence
          Length = 161504

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 264    accatagatttgtatgctaaggat 287
              ||||| ||||||||||||||||||
Sbjct: 160293 accattgatttgtatgctaaggat 160316
to top
>gb|AC158136.11| Mus musculus chromosome 7, clone RP23-58I15, complete sequence
          Length = 250563

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 264   accatagatttgtatgctaaggat 287
             ||||| ||||||||||||||||||
Sbjct: 23601 accattgatttgtatgctaaggat 23624
to top
>gb|AC145817.1| Pan troglodytes BAC clone RP43-6C4 from 7, complete sequence
          Length = 134049

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    agtgagaacatttgtcccac 58
             ||||||||||||||||||||
Sbjct: 85843 agtgagaacatttgtcccac 85862
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>gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete sequence
          Length = 129414

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    aaaaatacaagttgaatgtaaata 99
             ||||||||||||||| ||||||||
Sbjct: 77593 aaaaatacaagttgattgtaaata 77616
to top
>emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on chromosome 6 Contains part
              of the UTRN gene for utrophin (homologous to dystrophin)
              (DRP, DRP1, DMDL), a novel pseudogene similar to
              hypothetical protein HT023 and a novel pseudogene, complete
              sequence
          Length = 191752

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 184    ctgaatatatcagttattcgatgc 207
              ||||||||||||||||||| ||||
Sbjct: 141168 ctgaatatatcagttattctatgc 141191
to top
>emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chromosome 9q21.31-22.1
             Contains a novel gene, complete sequence
          Length = 186246

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   ttgacataattatcaaagaa 329
             ||||||||||||||||||||
Sbjct: 11931 ttgacataattatcaaagaa 11912
to top
>gb|AC108510.3| Homo sapiens chromosome 7 clone RP11-98O9, complete sequence
          Length = 74746

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agtgagaacatttgtcccac 58
             ||||||||||||||||||||
Sbjct: 31688 agtgagaacatttgtcccac 31669
to top
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21
          Length = 99492

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    ttattttctttaggaaaaat 81
             ||||||||||||||||||||
Sbjct: 71939 ttattttctttaggaaaaat 71958
to top
>gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, complete sequence
          Length = 211743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   atcaactcttccttcttaag 353
             ||||||||||||||||||||
Sbjct: 63085 atcaactcttccttcttaag 63066
to top
>gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, complete sequence
          Length = 95648

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    attattttctttaggaaaaa 80
             ||||||||||||||||||||
Sbjct: 32992 attattttctttaggaaaaa 32973
to top
>gb|AC104260.5| Homo sapiens chromosome 15, clone CTD-2536I1, complete sequence
          Length = 191528

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    ttattttctttaggaaaaatacaa 85
             |||||||||||| |||||||||||
Sbjct: 59280 ttattttctttaagaaaaatacaa 59303
to top
>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome
          Length = 280334

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     gaatatattcagcctagcca 36
              ||||||||||||||||||||
Sbjct: 258321 gaatatattcagcctagcca 258340
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 332     ctatcaactcttccttcttaagct 355
               |||||||||||||||| |||||||
Sbjct: 3029902 ctatcaactcttcctttttaagct 3029879
to top
>gb|DQ163920.1| Bacteriophage SD1-M, complete genome
          Length = 281083

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     gaatatattcagcctagcca 36
              ||||||||||||||||||||
Sbjct: 259070 gaatatattcagcctagcca 259089
to top
>gb|AF077255.1|AF077255 Littorina scutulata isolate Scut18 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077254.1|AF077254 Littorina scutulata isolate Scut17 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077253.1|AF077253 Littorina scutulata isolate Scut16 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077251.1|AF077251 Littorina scutulata isolate Scut14 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077249.1|AF077249 Littorina scutulata isolate Scut12 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077248.1|AF077248 Littorina scutulata isolate Scut11 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077247.1|AF077247 Littorina scutulata isolate Scut10 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077246.1|AF077246 Littorina scutulata isolate Scut9 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077244.1|AF077244 Littorina scutulata isolate Scut7 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077243.1|AF077243 Littorina scutulata isolate Scut6 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077242.1|AF077242 Littorina scutulata isolate Scut5 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077239.1|AF077239 Littorina scutulata isolate Scut2 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF077238.1|AF077238 Littorina scutulata isolate Scut1 cytochrome b gene, mitochondrial
           gene encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF023609.1|AF023609 Littorina subrotundata cytochrome b gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF023608.1|AF023608 Littorina subrotundata cytochrome b gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>gb|AF023607.1|AF023607 Littorina subrotundata cytochrome b gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 480

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
to top
>emb|AL357752.19| Human DNA sequence from clone RP13-26D14 on chromosome Xq13.2-21.1
             Contains the 5' end of the KIF4A gene for kinesin family
             member 4A, gene FLJ21093, a novel gene, the ARR3 gene for
             arrestin 3, retinal (x-arrestin), the P2RY4 gene for
             pyrimidinergic receptor P2Y, G-protein coupled, 4, the
             gene for a novel protein similar to diacylglycerol
             O-acyltransferase 2 like 1 (DGAT2L1), a novel pseudogene,
             the 3' end of the gene for a novel protein similar to
             diacylglycerol O-acyltransferase homolog 2 (mouse) (DGAT2)
             and two CpG islands, complete sequence
          Length = 178868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   aaatttcagtgttccttgag 409
             ||||||||||||||||||||
Sbjct: 87582 aaatttcagtgttccttgag 87601
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>gb|U89697.1|OTU89697 Oxytricha trifallax DNA polymerase alpha gene, micronuclear sequence
          Length = 6500

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  acatcatgaacaatcttttc 242
            ||||||||||||||||||||
Sbjct: 2639 acatcatgaacaatcttttc 2658
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>gb|U46797.1|LHU46797 Littorina horikawai cytochrome b gene, mitochondrial gene encoding
           mitochondrial protein, partial cds
          Length = 671

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  tttaggaaaaatacaagttgaatg 93
           |||||||||||||| |||||||||
Sbjct: 406 tttaggaaaaatactagttgaatg 429
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>emb|AL671331.6| Mouse DNA sequence from clone RP23-126C18 on chromosome X, complete
             sequence
          Length = 107095

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tattttctttaggaaaaata 82
             ||||||||||||||||||||
Sbjct: 49501 tattttctttaggaaaaata 49520


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,206,014
Number of Sequences: 3902068
Number of extensions: 5206014
Number of successful extensions: 116786
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116586
Number of HSP's gapped (non-prelim): 190
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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