Clone Name | rbastl25b05 |
---|---|
Clone Library Name | barley_pub |
>ATS19_HUMAN (Q8TE59) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 19) (ADAM-TS 19) (ADAM-TS19) Length = 1207 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Frame = +3 Query: 243 CSAPTILLTTLVELHASRD*AIRSPSSEACAAGFSSKTRNVCPGPSSPV-----PWK-YD 404 C A T H + + ++ SP S C+AG SS+ R CPG S P K Y Sbjct: 620 CKAGECTSRTSAPEHLAGEWSLWSPCSRTCSAGISSRERK-CPGLDSEARDCNGPRKQYR 678 Query: 405 SKISKPCSSGL 437 + PC +GL Sbjct: 679 ICENPPCPAGL 689
>FRZG_MYXXA (P31758) Protein-glutamate methylesterase frzG (EC 3.1.1.61)| Length = 334 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Frame = -3 Query: 385 GDEGPGQTFRVLEEK---PAAHASELGDRIAQSLEAWSSTSVVRRIVGAEHEVL 233 G + Q R++ P A+ + D + L W S R++ AEH+VL Sbjct: 159 GPKAVAQVLRMIPRAFPAPIAYCQHISDGFTEGLAHWLSNETALRVLEAEHDVL 212
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 309 RSPSSEACAAGFSSKTRNVCPGPSSPVPWKYDSKISKPCSS 431 R P+ A AAG + PG ++PVP K DS++ P S Sbjct: 252 RPPAGPAAAAGAAPAAPGTAPGGTAPVP-KEDSRLPAPKGS 291
>CD008_MOUSE (Q8CGI1) Protein C4orf008 homolog (Fragment)| Length = 944 Score = 30.0 bits (66), Expect = 2.9 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +3 Query: 315 PSSEACAAGFSSKTRNVCPGPSSPVPWKYDSKISKPCS 428 P + A GF ++ CP P +P P D IS P S Sbjct: 704 PKTATTAPGFVDTRKSFCPTPVAPPPSTTDGSISAPPS 741
>SYP_CHLPN (Q9Z851) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 568 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = -3 Query: 454 WLSDQMSPEEQGLDILLSYFQGTGDEGPGQTFRVLEEKPAAHASELGDRIAQSLE 290 W D + P+ D LL+ T E PG +R+ + AH LG R S E Sbjct: 374 WDRDLLPPQYG--DFLLAEEGDTCPENPGHPYRIYQGIEVAHIFNLGTRYTDSFE 426
>MT2_CANGA (P15114) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| [Contains: Metallothionein-2' (MT-2') (Metallothionein-II') (MT-II')] Length = 51 Score = 29.6 bits (65), Expect = 3.8 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -2 Query: 116 SCCGVPLYICCNSITEWCCTRAVRCLTC 33 +CC P C NS + C + +C TC Sbjct: 22 NCCAKPACACTNSASNECSCQTCKCQTC 49
>GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC cell-derived| growth factor) (PCDGF) [Contains: Acrogranin; Granulin-1; Granulin-2; Granulin-3; Granulin-4; Granulin-5; Granulin-6; Granulin-7] Length = 589 Score = 28.9 bits (63), Expect = 6.6 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = -2 Query: 119 YSCCGVPLYICCNSITEWCCTRAVRCLTCFY 27 + CC +P +CC S + CC + CL Y Sbjct: 384 WGCCPIPEAVCC-SDNQHCCPQGFTCLAQGY 413
>FIXC_RHISN (Q53208) Protein fixC| Length = 435 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +1 Query: 136 QNFINSSATPKIEKPILT*AALV*SR 213 QNF+ TPKIEK T AAL+ +R Sbjct: 393 QNFVRVDGTPKIEKERATTAALIKAR 418 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,847,728 Number of Sequences: 219361 Number of extensions: 1127877 Number of successful extensions: 3326 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3324 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)