ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
3dbj|AK073748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
4emb|AL139120.6| Human DNA sequence from clone RP11-25C19 on chro... 44 0.40
5emb|BX469905.5| Zebrafish DNA sequence from clone CH211-160B7 in... 44 0.40
6emb|BX248386.35| Zebrafish DNA sequence from clone CH211-231M12,... 42 1.6
7emb|AL118502.38|HSA371L19 Human DNA sequence from clone RP11-371... 42 1.6
8dbj|AP001804.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.6
9dbj|AP002965.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.6
10gb|AC157927.5| Mus musculus chromosome 3, clone RP24-85O24, comp... 40 6.2
11ref|XM_516224.1| PREDICTED: Pan troglodytes similar to titin (LO... 40 6.2
12gb|AC150657.1| Pan troglodytes chromosome 8 clone PTB-123K23 map... 40 6.2
13gb|AC150656.1| Pan troglodytes chromosome 8 clone PTB-026H08 map... 40 6.2
14ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2... 40 6.2
15gb|AF285443.4| Homo sapiens chromosome 8 clone SCb-449o20 map p2... 40 6.2
16gb|AF252830.5| Homo sapiens chromosome 8 clone SCb-295j18 map p2... 40 6.2
17gb|AF202031.5| Homo sapiens chromosome 8 clone SCb-497j4 map p23... 40 6.2
18gb|AF189745.6| Homo sapiens chromosome 8 clone SCb-324n11 map p2... 40 6.2
19gb|AF092920.1| Hydra viridis head-activator binding protein prec... 40 6.2
20gb|AC130360.4| Homo sapiens chromosome 8, clone RP11-287P18, com... 40 6.2
21emb|AL162851.10| Human DNA sequence from clone RP11-186M12 on ch... 40 6.2
22emb|X90569.1|HSTITINN2 H.sapiens mRNA for titin protein (clone h... 40 6.2
23gb|AC144950.1| Homo sapiens chromosome 8 clone RP11-191L23 map p... 40 6.2
24emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin 40 6.2
25emb|CR457447.5| Zebrafish DNA sequence from clone CH211-108P6 in... 40 6.2
26emb|BX324166.8| Zebrafish DNA sequence from clone DKEY-66A8 in l... 40 6.2
27gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Canc... 40 6.2
28gb|AY005129.1| Homo sapiens EP2 gene, complete sequence, alterna... 40 6.2
29gb|AC018709.9| Homo sapiens BAC clone RP11-215A19 from 4, comple... 40 6.2
30gb|AC134684.5| Homo sapiens chromosome 8, clone RP11-1118M6, com... 40 6.2
31gb|AC013463.7| Homo sapiens BAC clone RP11-303H9 from 2, complet... 40 6.2
32gb|AC130339.12| Homo sapiens chromosome 8, clone RP13-941O14, co... 40 6.2
33gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, comple... 40 6.2
34gb|AC130367.12| Homo sapiens chromosome 8, clone RP11-1322A13, c... 40 6.2
35gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, com... 40 6.2
36gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, comp... 40 6.2
37emb|BX000431.10| Zebrafish DNA sequence from clone DKEY-14B11 in... 40 6.2
38emb|BX072566.10| Human DNA sequence from clone RP11-25L22 on chr... 40 6.2
39emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 40 6.2
40emb|AL050303.4|HS214G14 Homo sapiens chromosome 21 PAC RPCIP704G... 40 6.2
41gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, com... 40 6.2
42dbj|AP005670.1| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.2
43gb|AC130365.5| Homo sapiens chromosome 8, clone RP11-1195F20, co... 40 6.2 
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score =  111 bits (56), Expect = 2e-21
 Identities = 230/288 (79%)
 Strand = Plus / Plus

                                                                         
Query: 163   ccgaagatagagaagccgattctgacatgagcagctttagtttagagtcgaccattttct 222
             |||| ||||||||||||||| ||||    |||||||||||||| ||||||   |||||||
Sbjct: 68876 ccgatgatagagaagccgatactgaagcaagcagctttagttttgagtcgcatattttct 68935

                                                                         
Query: 223   tgaactcggctagcacctcatgttctgctccaacaattcttcttaccacactagtagaac 282
             | |||||  ||| || ||| |  ||||||||||| |||||||| ||||||| || |||||
Sbjct: 68936 ttaactcaactaacagctccttctctgctccaacgattcttctgaccacaccagcagaac 68995

                                                                         
Query: 283   tccatgcttccagagactgagcaattcgatcaccaagctcagaggcatgtgctgctggtt 342
             |||||| ||||| ||| |||||||| || || || || |||| |  ||||  |||||  |
Sbjct: 68996 tccatgtttccaaagattgagcaatccgttcgccgagttcagggttatgtcttgctgaat 69055

                                                                         
Query: 343   tctcttccaagactcggaatgtctgtcctggaccttcatcgccagttccttggaaatatg 402
             |||| |||||||  | | || |||||||||| || || ||   |  |||||| |||||||
Sbjct: 69056 tctcctccaagatacaggatatctgtcctggcccatcctcattacctccttgcaaatatg 69115

                                                             
Query: 403   acagcaagatatccaaaccttgctcctctggactcatctgatcagata 450
             ||| ||| ||||||||| |||||||||| || |||||||| |||||||
Sbjct: 69116 acaacaaaatatccaaagcttgctcctccggcctcatctggtcagata 69163
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 2e-21
 Identities = 230/288 (79%)
 Strand = Plus / Plus

                                                                            
Query: 163      ccgaagatagagaagccgattctgacatgagcagctttagtttagagtcgaccattttct 222
                |||| ||||||||||||||| ||||    |||||||||||||| ||||||   |||||||
Sbjct: 16117706 ccgatgatagagaagccgatactgaagcaagcagctttagttttgagtcgcatattttct 16117765

                                                                            
Query: 223      tgaactcggctagcacctcatgttctgctccaacaattcttcttaccacactagtagaac 282
                | |||||  ||| || ||| |  ||||||||||| |||||||| ||||||| || |||||
Sbjct: 16117766 ttaactcaactaacagctccttctctgctccaacgattcttctgaccacaccagcagaac 16117825

                                                                            
Query: 283      tccatgcttccagagactgagcaattcgatcaccaagctcagaggcatgtgctgctggtt 342
                |||||| ||||| ||| |||||||| || || || || |||| |  ||||  |||||  |
Sbjct: 16117826 tccatgtttccaaagattgagcaatccgttcgccgagttcagggttatgtcttgctgaat 16117885

                                                                            
Query: 343      tctcttccaagactcggaatgtctgtcctggaccttcatcgccagttccttggaaatatg 402
                |||| |||||||  | | || |||||||||| || || ||   |  |||||| |||||||
Sbjct: 16117886 tctcctccaagatacaggatatctgtcctggcccatcctcattacctccttgcaaatatg 16117945

                                                                
Query: 403      acagcaagatatccaaaccttgctcctctggactcatctgatcagata 450
                ||| ||| ||||||||| |||||||||| || |||||||| |||||||
Sbjct: 16117946 acaacaaaatatccaaagcttgctcctccggcctcatctggtcagata 16117993
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>dbj|AK073748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066L16, full
            insert sequence
          Length = 3317

 Score =  111 bits (56), Expect = 2e-21
 Identities = 230/288 (79%)
 Strand = Plus / Minus

                                                                        
Query: 163  ccgaagatagagaagccgattctgacatgagcagctttagtttagagtcgaccattttct 222
            |||| ||||||||||||||| ||||    |||||||||||||| ||||||   |||||||
Sbjct: 3172 ccgatgatagagaagccgatactgaagcaagcagctttagttttgagtcgcatattttct 3113

                                                                        
Query: 223  tgaactcggctagcacctcatgttctgctccaacaattcttcttaccacactagtagaac 282
            | |||||  ||| || ||| |  ||||||||||| |||||||| ||||||| || |||||
Sbjct: 3112 ttaactcaactaacagctccttctctgctccaacgattcttctgaccacaccagcagaac 3053

                                                                        
Query: 283  tccatgcttccagagactgagcaattcgatcaccaagctcagaggcatgtgctgctggtt 342
            |||||| ||||| ||| |||||||| || || || || |||| |  ||||  |||||  |
Sbjct: 3052 tccatgtttccaaagattgagcaatccgttcgccgagttcagggttatgtcttgctgaat 2993

                                                                        
Query: 343  tctcttccaagactcggaatgtctgtcctggaccttcatcgccagttccttggaaatatg 402
            |||| |||||||  | | || |||||||||| || || ||   |  |||||| |||||||
Sbjct: 2992 tctcctccaagatacaggatatctgtcctggcccatcctcattacctccttgcaaatatg 2933

                                                            
Query: 403  acagcaagatatccaaaccttgctcctctggactcatctgatcagata 450
            ||| ||| ||||||||| |||||||||| || |||||||| |||||||
Sbjct: 2932 acaacaaaatatccaaagcttgctcctccggcctcatctggtcagata 2885
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>emb|AL139120.6| Human DNA sequence from clone RP11-25C19 on chromosome 10 Contains the
             3' end of the VTI1A  gene for vesicle transport through
             interaction with t-SNAREs homolog 1A (yeast), a novel gene
             and the 5' end of a novel gene, complete sequence
          Length = 169775

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 12    gatgtcatcaatcaaataaaag 33
             ||||||||||||||||||||||
Sbjct: 71213 gatgtcatcaatcaaataaaag 71192
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>emb|BX469905.5| Zebrafish DNA sequence from clone CH211-160B7 in linkage group 9,
             complete sequence
          Length = 113585

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 21    aatcaaataaaagcaagtcaaacaac 46
             |||||||||||||||||| |||||||
Sbjct: 13055 aatcaaataaaagcaagtaaaacaac 13080
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>emb|BX248386.35| Zebrafish DNA sequence from clone CH211-231M12, complete sequence
          Length = 148681

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 187   acatgagcagctttagtttag 207
             |||||||||||||||||||||
Sbjct: 31121 acatgagcagctttagtttag 31141
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>emb|AL118502.38|HSA371L19 Human DNA sequence from clone RP11-371L19 on chromosome 20 Contains the
             C20orf54 gene, the C20orf55 gene, the RPS10L gene for
             ribosomal protein S10-like and five CpG islands, complete
             sequence
          Length = 126259

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 117   atagaacaaaattcatgtgcaaaat 141
             |||||||||||||||| ||||||||
Sbjct: 78677 atagaacaaaattcatttgcaaaat 78653
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>dbj|AP001804.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-164A10, complete
            sequence
          Length = 166302

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   atatgtataatggaacaccac 109
            |||||||||||||||||||||
Sbjct: 1165 atatgtataatggaacaccac 1145
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>dbj|AP002965.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-299I2, complete
             sequence
          Length = 150481

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    atatgtataatggaacaccac 109
             |||||||||||||||||||||
Sbjct: 88382 atatgtataatggaacaccac 88362
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>gb|AC157927.5| Mus musculus chromosome 3, clone RP24-85O24, complete sequence
          Length = 195262

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tcaaataaaagcaagtcaaa 42
             ||||||||||||||||||||
Sbjct: 36484 tcaaataaaagcaagtcaaa 36503
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>ref|XM_516224.1| PREDICTED: Pan troglodytes similar to titin (LOC460103), mRNA
          Length = 2703

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 336  gctggtttctcttccaagac 355
            ||||||||||||||||||||
Sbjct: 1856 gctggtttctcttccaagac 1837
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>gb|AC150657.1| Pan troglodytes chromosome 8 clone PTB-123K23 map human ortholog p23.1,
             complete sequence
          Length = 173624

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 57929 acaccacaacaagaatagaa 57910
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>gb|AC150656.1| Pan troglodytes chromosome 8 clone PTB-026H08 map human ortholog p23.1,
             complete sequence
          Length = 155351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 43096 acaccacaacaagaatagaa 43077
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>ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2-A, mRNA
          Length = 101518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   gctggtttctcttccaagac 355
             ||||||||||||||||||||
Sbjct: 32589 gctggtttctcttccaagac 32570
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>gb|AF285443.4| Homo sapiens chromosome 8 clone SCb-449o20 map p23.1, complete sequence
          Length = 147536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 44143 acaccacaacaagaatagaa 44124
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>gb|AF252830.5| Homo sapiens chromosome 8 clone SCb-295j18 map p23.1, complete sequence
          Length = 172560

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 36577 acaccacaacaagaatagaa 36558
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>gb|AF202031.5| Homo sapiens chromosome 8 clone SCb-497j4 map p23.1, complete sequence
          Length = 144793

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 94105 acaccacaacaagaatagaa 94086
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>gb|AF189745.6| Homo sapiens chromosome 8 clone SCb-324n11 map p23.1, complete sequence
          Length = 145275

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 91010 acaccacaacaagaatagaa 90991
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>gb|AF092920.1| Hydra viridis head-activator binding protein precursor (HAB) mRNA,
            complete cds
          Length = 5359

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  gaacaaaattcatgtgcaaa 139
            ||||||||||||||||||||
Sbjct: 5040 gaacaaaattcatgtgcaaa 5021
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>gb|AC130360.4| Homo sapiens chromosome 8, clone RP11-287P18, complete sequence
          Length = 171474

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acaccacaacaagaatagaa 122
              ||||||||||||||||||||
Sbjct: 140988 acaccacaacaagaatagaa 141007
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>emb|AL162851.10| Human DNA sequence from clone RP11-186M12 on chromosome 22, complete
             sequence
          Length = 172545

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gcatgtgctgctggtttctc 346
             ||||||||||||||||||||
Sbjct: 59769 gcatgtgctgctggtttctc 59788
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>emb|X90569.1|HSTITINN2 H.sapiens mRNA for titin protein (clone hsk1-hsk19)
          Length = 23887

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   gctggtttctcttccaagac 355
             ||||||||||||||||||||
Sbjct: 22427 gctggtttctcttccaagac 22408
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>gb|AC144950.1| Homo sapiens chromosome 8 clone RP11-191L23 map p22-p21, complete
             sequence
          Length = 147008

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 10976 acaccacaacaagaatagaa 10995
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>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin
          Length = 294540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    gctggtttctcttccaagac 355
              ||||||||||||||||||||
Sbjct: 169665 gctggtttctcttccaagac 169646
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>emb|CR457447.5| Zebrafish DNA sequence from clone CH211-108P6 in linkage group 15,
              complete sequence
          Length = 122848

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 55     ctagtgcaacaccattctgttata 78
              |||||||||| |||||||||||||
Sbjct: 108680 ctagtgcaactccattctgttata 108657
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>emb|BX324166.8| Zebrafish DNA sequence from clone DKEY-66A8 in linkage group 6, complete
              sequence
          Length = 215450

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     ctagtgcaacaccattctgttata 78
              |||||| |||||||||||||||||
Sbjct: 211292 ctagtgtaacaccattctgttata 211315
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>gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 129641

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    ccttggaaatatgacagcaa 409
              ||||||||||||||||||||
Sbjct: 120120 ccttggaaatatgacagcaa 120101
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>gb|AY005129.1| Homo sapiens EP2 gene, complete sequence, alternatively spliced
          Length = 19426

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 13892 acaccacaacaagaatagaa 13873
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>gb|AC018709.9| Homo sapiens BAC clone RP11-215A19 from 4, complete sequence
          Length = 161013

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    tggtttctcttccaagactc 357
              ||||||||||||||||||||
Sbjct: 111811 tggtttctcttccaagactc 111830
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>gb|AC134684.5| Homo sapiens chromosome 8, clone RP11-1118M6, complete sequence
          Length = 175202

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 10970 acaccacaacaagaatagaa 10989
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>gb|AC013463.7| Homo sapiens BAC clone RP11-303H9 from 2, complete sequence
          Length = 168493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    aatagaacaaaattcatgtg 135
              ||||||||||||||||||||
Sbjct: 148162 aatagaacaaaattcatgtg 148143
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>gb|AC130339.12| Homo sapiens chromosome 8, clone RP13-941O14, complete sequence
          Length = 173255

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acaccacaacaagaatagaa 122
              ||||||||||||||||||||
Sbjct: 164122 acaccacaacaagaatagaa 164141
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>gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   gctggtttctcttccaagac 355
             ||||||||||||||||||||
Sbjct: 84753 gctggtttctcttccaagac 84772
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>gb|AC130367.12| Homo sapiens chromosome 8, clone RP11-1322A13, complete sequence
          Length = 188884

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 65127 acaccacaacaagaatagaa 65108
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>gb|AC134683.9| Homo sapiens chromosome 8, clone RP11-1175L4, complete sequence
          Length = 172084

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 45012 acaccacaacaagaatagaa 44993
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>gb|AC134395.7| Homo sapiens chromosome 8, clone RP11-739E3, complete sequence
          Length = 178401

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   acaccacaacaagaatagaa 122
             ||||||||||||||||||||
Sbjct: 41852 acaccacaacaagaatagaa 41833
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>emb|BX000431.10| Zebrafish DNA sequence from clone DKEY-14B11 in linkage group 15,
              complete sequence
          Length = 200161

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     ctagtgcaacaccattctgttata 78
              |||||||||| |||||||||||||
Sbjct: 133473 ctagtgcaactccattctgttata 133496
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>emb|BX072566.10| Human DNA sequence from clone RP11-25L22 on chromosome 22, complete
             sequence
          Length = 164239

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   gcatgtgctgctggtttctc 346
             ||||||||||||||||||||
Sbjct: 34007 gcatgtgctgctggtttctc 33988
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>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gcatgtgctgctggtttctc 346
             ||||||||||||||||||||
Sbjct: 74106 gcatgtgctgctggtttctc 74125
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>emb|AL050303.4|HS214G14 Homo sapiens chromosome 21 PAC RPCIP704G14214Q2, complete sequence
          Length = 166239

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gcatgtgctgctggtttctc 346
             ||||||||||||||||||||
Sbjct: 69520 gcatgtgctgctggtttctc 69539
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>gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, complete sequence
          Length = 191171

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    tcaaataaaagcaagtcaaa 42
             ||||||||||||||||||||
Sbjct: 94361 tcaaataaaagcaagtcaaa 94342
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>dbj|AP005670.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-72P4, complete
             sequence
          Length = 184770

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   gcatgtgctgctggtttctc 346
             ||||||||||||||||||||
Sbjct: 32720 gcatgtgctgctggtttctc 32701
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>gb|AC130365.5| Homo sapiens chromosome 8, clone RP11-1195F20, complete sequence
          Length = 171639

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acaccacaacaagaatagaa 122
              ||||||||||||||||||||
Sbjct: 145422 acaccacaacaagaatagaa 145441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,767,528
Number of Sequences: 3902068
Number of extensions: 4767528
Number of successful extensions: 120878
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120731
Number of HSP's gapped (non-prelim): 141
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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