Clone Name | rbastl25b03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC174721.1| Gasterosteus aculeatus clone VMRC28-84C14, complete sequence Length = 125967 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 14 ctgcccgcttatttagacgtgactgaggtgtta 46 ||||||||||||| || ||||||||||||||| Sbjct: 85764 ctgcccgcttattgtgatgtgactgaggtgtta 85732
>emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chromosome Xq24-25 Contains a chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1) pseudogene and a CpG island, complete sequence Length = 180851 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 agcaggactccctatggccg 310 |||||||||||||||||||| Sbjct: 113769 agcaggactccctatggccg 113788
>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence Length = 184338 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tggccgccgcaggggagggg 324 |||||||||||||||||||| Sbjct: 110637 tggccgccgcaggggagggg 110618
>gb|AC017076.14| Homo sapiens BAC clone RP11-439M11 from 2, complete sequence Length = 118808 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 agcgaggaggaagggaagag 374 |||||||||||||||||||| Sbjct: 8263 agcgaggaggaagggaagag 8282
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tttgcaccagggagctctgc 278 |||||||||||||||||||| Sbjct: 205763 tttgcaccagggagctctgc 205782
>ref|XM_315264.2| Anopheles gambiae str. PEST ENSANGP00000022301 (ENSANGG00000019812), partial mRNA Length = 1572 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gcgtgcagcgaggaggaagggaag 372 ||||||||||||||||||| |||| Sbjct: 487 gcgtgcagcgaggaggaagcgaag 510
>ref|XM_307212.2| Anopheles gambiae str. PEST ENSANGP00000014562 (ENSANGG00000012073), partial mRNA Length = 1206 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gcgtgcagcgaggaggaagggaag 372 ||||||||||||||||||| |||| Sbjct: 487 gcgtgcagcgaggaggaagcgaag 510
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 ctatggccgccgcaggggagggga 325 ||||||| |||||||||||||||| Sbjct: 78047 ctatggcagccgcaggggagggga 78024
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 ctatggccgccgcaggggagggga 325 ||||||| |||||||||||||||| Sbjct: 43829 ctatggcagccgcaggggagggga 43852 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,689,616 Number of Sequences: 3902068 Number of extensions: 2689616 Number of successful extensions: 52234 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52213 Number of HSP's gapped (non-prelim): 21 length of query: 397 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 375 effective length of database: 17,147,199,772 effective search space: 6430199914500 effective search space used: 6430199914500 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)