>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 59/65 (90%), Gaps = 2/65 (3%)
 Strand = Plus / Plus

                                                                            
Query: 17       tcttatatatcggaataaatatttgcaaaaat-cttgt-acattctataatctacaggta 74
                |||||||||| | ||||||||||||||||||  ||| | |||||||||||||||||||||
Sbjct: 39007232 tcttatatatagaaataaatatttgcaaaaaaacttcttacattctataatctacaggta 39007291

                     
Query: 75       caaaa 79
                |||||
Sbjct: 39007292 caaaa 39007296

>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 59/65 (90%), Gaps = 2/65 (3%)
 Strand = Plus / Plus

                                                                         
Query: 17    tcttatatatcggaataaatatttgcaaaaat-cttgt-acattctataatctacaggta 74
             |||||||||| | ||||||||||||||||||  ||| | |||||||||||||||||||||
Sbjct: 80865 tcttatatatagaaataaatatttgcaaaaaaacttcttacattctataatctacaggta 80924

                  
Query: 75    caaaa 79
             |||||
Sbjct: 80925 caaaa 80929

>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506A10
          Length = 145265

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 59/65 (90%), Gaps = 2/65 (3%)
 Strand = Plus / Plus

                                                                         
Query: 17    tcttatatatcggaataaatatttgcaaaaat-cttgt-acattctataatctacaggta 74
             |||||||||| | ||||||||||||||||||  ||| | |||||||||||||||||||||
Sbjct: 25212 tcttatatatagaaataaatatttgcaaaaaaacttcttacattctataatctacaggta 25271

                  
Query: 75    caaaa 79
             |||||
Sbjct: 25272 caaaa 25276

>dbj|AK061290.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A05, full
           insert sequence
          Length = 1054

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 59/65 (90%), Gaps = 2/65 (3%)
 Strand = Plus / Minus

                                                                       
Query: 17  tcttatatatcggaataaatatttgcaaaaat-cttgt-acattctataatctacaggta 74
           |||||||||| | ||||||||||||||||||  ||| | |||||||||||||||||||||
Sbjct: 907 tcttatatatagaaataaatatttgcaaaaaaacttcttacattctataatctacaggta 848

                
Query: 75  caaaa 79
           |||||
Sbjct: 847 caaaa 843

>gb|BC044987.1| Xenopus laevis hypothetical protein MGC53006, mRNA (cDNA clone
            MGC:53006 IMAGE:5536996), complete cds
          Length = 4054

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 1    aaagccttttgtcccttcttatatatcggaa 31
            |||||||||||||| |||||||| |||||||
Sbjct: 1690 aaagccttttgtcctttcttataaatcggaa 1720

>emb|CR628323.11| Zebrafish DNA sequence from clone DKEY-36G24 in linkage group 17,
            complete sequence
          Length = 154249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 30   aataaatatttgcaaaaatct 50
            |||||||||||||||||||||
Sbjct: 9939 aataaatatttgcaaaaatct 9919

>gb|CP000179.1| Drosophila melanogaster genomic scaffold 211000022280253
          Length = 50690

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    tgtacattctataatctacag 71
             |||||||||||||||||||||
Sbjct: 11055 tgtacattctataatctacag 11035



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 51   tgtacattctataatctacag 71
            |||||||||||||||||||||
Sbjct: 4131 tgtacattctataatctacag 4111

>ref|XM_464704.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cctgagcttgacgccatggc 202
            ||||||||||||||||||||
Sbjct: 1675 cctgagcttgacgccatggc 1656

>ref|XM_464705.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cctgagcttgacgccatggc 202
            ||||||||||||||||||||
Sbjct: 1264 cctgagcttgacgccatggc 1245

>ref|XM_506761.1| PREDICTED Oryza sativa (japonica cultivar-group), B1131G07.28-2 mRNA
          Length = 1529

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cctgagcttgacgccatggc 202
            ||||||||||||||||||||
Sbjct: 1294 cctgagcttgacgccatggc 1275

>gb|DQ155560.1| Hepatitis C virus strain D3 polyprotein gene, partial cds
          Length = 9360

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  ggctgccaccctgttgagtt 292
            ||||||||||||||||||||
Sbjct: 9077 ggctgccaccctgttgagtt 9058

>emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on chromosome 9 Contains
            part of the MPDZ gene for multiple PDZ domain protein and
            GSSs, complete sequence
          Length = 103822

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 35   atatttgcaaaaatcttgtacattctat 62
            |||||||||||||| | |||||||||||
Sbjct: 7228 atatttgcaaaaatatggtacattctat 7201

>emb|CR936648.1| Homo sapiens mRNA; cDNA DKFZp781P216 (from clone DKFZp781P216)
          Length = 6809

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 35   atatttgcaaaaatcttgtacattctat 62
            |||||||||||||| | |||||||||||
Sbjct: 3239 atatttgcaaaaatatggtacattctat 3266

>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    ggcgacgacgcgaccgagct 400
              ||||||||||||||||||||
Sbjct: 284877 ggcgacgacgcgaccgagct 284896

>emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the
              Gp1ba gene for glycoprotein 1b alpha polypeptide, the
              Slc25a11 gene for solute carrier family 25 (mitochondrial
              carrier; oxoglutarate carrier) member 11, the gene for a
              novel PA domain and C3HC4 type zinc finger (RING finger)
              containing protein, the Pfn1 gene for profilin 1, five
              novel genes, the Eno3 gene for muscle enolase 3 beta, the
              Spag7 gene for sperm associated antigen 7, the Kif1c gene
              for kinesin family member 1C, a ribosomal protein 37A
              (Rpl37a) pseudogene, the gene for a novel zinc finger
              protein and six CpG islands, complete sequence
          Length = 207086

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     acaaaaagttaggaaagaaagaga 97
              ||||||||||| ||||||||||||
Sbjct: 114303 acaaaaagttaagaaagaaagaga 114280

>emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromosome 11, complete
             sequence
          Length = 188880

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    acaaaaagttaggaaagaaagaga 97
             ||||||||||| ||||||||||||
Sbjct: 77882 acaaaaagttaagaaagaaagaga 77859

>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194234

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     aaaaagttaggaaagaaaga 95
              ||||||||||||||||||||
Sbjct: 111662 aaaaagttaggaaagaaaga 111643

>gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181345

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 35    atatttgcaaaaatcttgtacattctat 62
             ||||||||||||| ||||||||||||||
Sbjct: 48605 atatttgcaaaaa-cttgtacattctat 48579

>gb|AC094103.2| Homo sapiens chromosome 5 clone RP11-420O16, complete sequence
          Length = 152549

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 350    aaaattctattggcagactaatgt 373
              |||||||||||||||||| |||||
Sbjct: 136072 aaaattctattggcagacaaatgt 136049

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     cctgagcttgacgccatggc 202
               ||||||||||||||||||||
Sbjct: 6802041 cctgagcttgacgccatggc 6802060

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     cggtgtccgtgcgggtggcg 136
               ||||||||||||||||||||
Sbjct: 2567656 cggtgtccgtgcgggtggcg 2567637

>gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, complete sequence
          Length = 211732

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aagccttttgtcccttctta 21
              ||||||||||||||||||||
Sbjct: 140336 aagccttttgtcccttctta 140355

>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0758B01
          Length = 159206

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctgagcttgacgccatggc 202
             ||||||||||||||||||||
Sbjct: 19767 cctgagcttgacgccatggc 19786

>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1131G07
          Length = 133992

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    cctgagcttgacgccatggc 202
              ||||||||||||||||||||
Sbjct: 123094 cctgagcttgacgccatggc 123113

>dbj|AK122138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136E09, full
            insert sequence
          Length = 1889

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cctgagcttgacgccatggc 202
            ||||||||||||||||||||
Sbjct: 1674 cctgagcttgacgccatggc 1655

>dbj|AK122077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119E05, full
            insert sequence
          Length = 1528

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cctgagcttgacgccatggc 202
            ||||||||||||||||||||
Sbjct: 1293 cctgagcttgacgccatggc 1274

>dbj|AK064029.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B04, full
            insert sequence
          Length = 1479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 183  cctgagcttgacgccatggc 202
            ||||||||||||||||||||
Sbjct: 1264 cctgagcttgacgccatggc 1245

>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete
             sequence
          Length = 205067

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gaaagaaagagatgaacagg 105
             ||||||||||||||||||||
Sbjct: 70753 gaaagaaagagatgaacagg 70734


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,765,752
Number of Sequences: 3902068
Number of extensions: 3765752
Number of successful extensions: 78441
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 78302
Number of HSP's gapped (non-prelim): 136
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)