>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 84       ctatagattaaaggaaatacaacatctta 112
                |||||||||||||||| ||||||||||||
Sbjct: 19143705 ctatagattaaaggaagtacaacatctta 19143677

>dbj|AK063403.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A05, full
            insert sequence
          Length = 2337

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 84   ctatagattaaaggaaatacaacatctta 112
            |||||||||||||||| ||||||||||||
Sbjct: 2277 ctatagattaaaggaagtacaacatctta 2249

>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 84    ctatagattaaaggaaatacaacatctta 112
             |||||||||||||||| ||||||||||||
Sbjct: 77225 ctatagattaaaggaagtacaacatctta 77197

>gb|AC151912.1| Pan troglodytes chromosome X clone PTB-093M21 map human ortholog q26.2,
              complete sequence
          Length = 180904

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 83     gctatagattaaaggaaatacaacatc 109
              |||||||||| ||||||||||||||||
Sbjct: 148431 gctatagatttaaggaaatacaacatc 148457

>emb|CR385039.8| Zebrafish DNA sequence from clone DKEYP-31D1 in linkage group 24,
             complete sequence
          Length = 166302

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 115   taaatttggtacattaataattt 137
             |||||||||||||||||||||||
Sbjct: 51137 taaatttggtacattaataattt 51115

>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21
             Contains the 3' end of the HCK for hemopoietic cell
             kinase, the gene for novel protein (KIAA0255), the RPL24P1
             gene for ribosomal protein L24 pseudogene 1 and two CpG
             Islands, complete sequence
          Length = 111694

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 31    ttcaaatcagaattttgaaatcatcaagt 59
             ||||| ||||||||| |||||||||||||
Sbjct: 39515 ttcaactcagaatttggaaatcatcaagt 39487

>ref|NM_111250.2| Arabidopsis thaliana binding AT3G03790 transcript variant
           AT3G03790.1 mRNA, complete cds
          Length = 4023

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 tgcttcttttactctagaag 307
           ||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaag 870

>ref|NM_202484.1| Arabidopsis thaliana binding AT3G03790 transcript variant
           AT3G03790.2 mRNA, complete cds
          Length = 4032

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 tgcttcttttactctagaag 307
           ||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaag 870

>ref|XM_633867.1| Dictyostelium discoideum hypothetical protein (DDB0185622), partial
           mRNA
          Length = 882

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 catcttaggtaaatttggta 125
           ||||||||||||||||||||
Sbjct: 792 catcttaggtaaatttggta 811

>gb|AC150919.6| Bos taurus  BAC CH240-303F16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 160376

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ttcaaatcagaattttgaaa 50
             ||||||||||||||||||||
Sbjct: 47258 ttcaaatcagaattttgaaa 47239

>gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome 14, complete sequence
          Length = 181062

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     ttcaaatcagaattttgaaatcat 54
              ||||| ||||||||||||||||||
Sbjct: 180291 ttcaagtcagaattttgaaatcat 180268

>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence,
             complete sequence
          Length = 101410

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tgcttcttttactctagaag 307
             ||||||||||||||||||||
Sbjct: 53272 tgcttcttttactctagaag 53253

>gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complete sequence
          Length = 224941

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    ttcaaatcagaattttgaaatcat 54
             ||||| ||||||||||||||||||
Sbjct: 23816 ttcaagtcagaattttgaaatcat 23793

>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence
          Length = 200656

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     gttcaaatcagaattttgaa 49
              ||||||||||||||||||||
Sbjct: 171292 gttcaaatcagaattttgaa 171273

>gb|AC022202.12| Homo sapiens BAC clone RP11-321E8 from 7, complete sequence
          Length = 95097

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    caaatcagaattttgaaatc 52
             ||||||||||||||||||||
Sbjct: 51195 caaatcagaattttgaaatc 51214

>emb|BX927378.12| Zebrafish DNA sequence from clone CH211-116K3 in linkage group 5,
              complete sequence
          Length = 123661

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    tcccccctcaaacttgatgg 186
              ||||||||||||||||||||
Sbjct: 102925 tcccccctcaaacttgatgg 102906

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 85       tatagattaaaggaaataca 104
                ||||||||||||||||||||
Sbjct: 16535510 tatagattaaaggaaataca 16535529

>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0583E12
          Length = 152449

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tatagattaaaggaaataca 104
             ||||||||||||||||||||
Sbjct: 31490 tatagattaaaggaaataca 31509

>dbj|AK117198.1| Arabidopsis thaliana At3g03790 mRNA for unknown protein, complete
           cds, clone: RAFL16-74-J10
          Length = 4024

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 tgcttcttttactctagaag 307
           ||||||||||||||||||||
Sbjct: 851 tgcttcttttactctagaag 870

>emb|AL136969.7| Human DNA sequence from clone RP1-207J11 on chromosome 7 Contains
            ESTs and STSs. Contains two zinc finger protein
            pseudogenes, a putative novel gene and an HNRPC
            (heterogeneous nuclear ribonucleoprotein C (C1/C2))
            pseudogene, complete sequence
          Length = 79666

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   caaatcagaattttgaaatc 52
            ||||||||||||||||||||
Sbjct: 1869 caaatcagaattttgaaatc 1888


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,847,110
Number of Sequences: 3902068
Number of extensions: 2847110
Number of successful extensions: 50766
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50709
Number of HSP's gapped (non-prelim): 57
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)