ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP006664.1| Lotus japonicus genomic DNA, chromosome 5, clone... 46 0.091
2dbj|AP006551.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.091
3dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.091
4dbj|AP004916.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.091
5dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.091
6dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.091
7dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.091
8gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, comple... 44 0.36
9ref|XM_740754.1| Plasmodium chabaudi chabaudi carbamoyl phosphat... 42 1.4
10emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
11gb|U97593.1| Caenorhabditis elegans cosmid C46G7, complete sequence 42 1.4
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
13emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in... 42 1.4
14gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, comp... 40 5.6
15gb|AC161444.4| Mus musculus chromosome 1, clone RP23-446D9, comp... 40 5.6
16gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete sequence 40 5.6
17gb|AC146459.3| Pan troglodytes BAC clone CH251-229E22 from Y, co... 40 5.6
18gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, com... 40 5.6
19gb|AC124763.4| Mus musculus BAC clone RP23-158P17 from 12, compl... 40 5.6
20emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, ... 40 5.6
21emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC... 40 5.6
22emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on ch... 40 5.6
23dbj|BS000617.1| Pan troglodytes chromosome Y clone:PTB-206A19, c... 40 5.6
24dbj|BS000555.1| Pan troglodytes chromosome Y clone:PTB-439G17, c... 40 5.6
25emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in... 40 5.6
26gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 5.6
27gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell... 40 5.6
28gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 ma... 40 5.6
29gb|AC005897.3| Arabidopsis thaliana chromosome 2 clone T10J7 map... 40 5.6
30gb|AY065581.1| Zea mays clone tac 923.17 3' Ac insertion site se... 40 5.6
31gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, comple... 40 5.6
32gb|AC008589.6| Homo sapiens chromosome 5 clone CTC-574I1, comple... 40 5.6
33gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, comp... 40 5.6
34gb|AC102488.11| Mus musculus chromosome 1, clone RP24-496O18, co... 40 5.6
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
36gb|AC093894.2| Homo sapiens BAC clone RP11-714E5 from 2, complet... 40 5.6
37gb|AC008779.5|AC008779 Homo sapiens chromosome 5 clone CTD-2023H... 40 5.6
38gb|AC009494.2|AC009494 Homo sapiens BAC clone RP11-450B24 from Y... 40 5.6
39gb|AC064848.5| Homo sapiens BAC clone RP11-81F3 from 2, complete... 40 5.6
40gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana... 40 5.6
41dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
42emb|AJ575247.1|LJA575247 Lotus japonicus nfr1 gene for Nod-facto... 40 5.6
43emb|AJ575246.1|LJA575246 Lotus japonicus nfr1 gene for Nod-facto... 40 5.6
44gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50... 40 5.6
45gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome... 40 5.6
46dbj|AP001085.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.6
47dbj|AP000577.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 5.6
48emb|CT573093.3| CH250-1K10, complete sequence 40 5.6
49gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complet... 40 5.6
50emb|AL928901.8| Zebrafish DNA sequence from clone CH211-155M12 i... 40 5.6
51gb|AC156158.1| Homo sapiens chromosome 10 clone WI2-1708O12, com... 40 5.6
52dbj|AP006536.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.6
53dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 5.6
54gb|AC166175.2| Mus musculus BAC clone RP23-53H1 from chromosome ... 40 5.6
55dbj|AP004515.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 5.6
56emb|AL663101.8| Mouse DNA sequence from clone RP23-205M7 on chro... 40 5.6
57gb|J04804.1|CELDEB1A C.elegans vinculin (deb-1) gene, complete cds 40 5.6 
>dbj|AP006664.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01C14, TM0359,
              complete sequence
          Length = 112181

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 162    ttgaggcatggtggtgccatagggttt 188
              |||||||||||||||||||| ||||||
Sbjct: 100307 ttgaggcatggtggtgccatggggttt 100333
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>dbj|AP006551.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT35D17, TM0104,
           complete sequence
          Length = 96208

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 162 ttgaggcatggtggtgccatagggttt 188
           |||||||||||||||||||| ||||||
Sbjct: 938 ttgaggcatggtggtgccatggggttt 912
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>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b,
             complete sequence
          Length = 93261

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 162   ttgaggcatggtggtgccatagggttt 188
             |||||||||||||||||||| ||||||
Sbjct: 27548 ttgaggcatggtggtgccatggggttt 27522
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>dbj|AP004916.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18E24, TM0074,
             complete sequence
          Length = 131741

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 162   ttgaggcatggtggtgccatagggttt 188
             |||||||||||||||||||| ||||||
Sbjct: 62116 ttgaggcatggtggtgccatggggttt 62142
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>dbj|AP004907.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11D15, TM0065,
             complete sequence
          Length = 115046

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 162   ttgaggcatggtggtgccatagggttt 188
             |||||||||||||||||||| ||||||
Sbjct: 32698 ttgaggcatggtggtgccatggggttt 32672
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>dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098a,
            complete sequence
          Length = 33254

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 162  ttgaggcatggtggtgccatagggttt 188
            |||||||||||||||||||| ||||||
Sbjct: 1358 ttgaggcatggtggtgccatggggttt 1384
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>dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14P20, TM0087,
             complete sequence
          Length = 124300

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 162   ttgaggcatggtggtgccatagggttt 188
             |||||||||||||||||||| ||||||
Sbjct: 35680 ttgaggcatggtggtgccatggggttt 35654
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>gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, complete sequence
          Length = 196537

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 380   tcttgtcctttccttttcgatttttt 405
             |||||||||||||||||| |||||||
Sbjct: 48098 tcttgtcctttccttttctatttttt 48123
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>ref|XM_740754.1| Plasmodium chabaudi chabaudi carbamoyl phosphate synthetase
            (PC000179.01.0) partial mRNA
          Length = 6318

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 14   ctttaatcaacaaatttcccaacaa 38
            |||||||||| ||||||||||||||
Sbjct: 3561 ctttaatcaagaaatttcccaacaa 3585
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    tgcgaaagcatattccaacaa 86
             |||||||||||||||||||||
Sbjct: 55392 tgcgaaagcatattccaacaa 55412
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>gb|U97593.1| Caenorhabditis elegans cosmid C46G7, complete sequence
          Length = 43585

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    aacaaatttcccaacaaaata 42
             |||||||||||||||||||||
Sbjct: 35984 aacaaatttcccaacaaaata 36004
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 66       tgcgaaagcatattccaacaa 86
                |||||||||||||||||||||
Sbjct: 20952160 tgcgaaagcatattccaacaa 20952180
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>emb|CR847514.13| Zebrafish DNA sequence from clone DKEYP-11D6 in linkage group 3, complete
              sequence
          Length = 165569

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     acaggcgatacatcaaaatca 108
              |||||||||||||||||||||
Sbjct: 108976 acaggcgatacatcaaaatca 108956
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>gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, complete sequence
          Length = 212061

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   ttcaaaataccaggatcaga 315
             ||||||||||||||||||||
Sbjct: 19943 ttcaaaataccaggatcaga 19924
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>gb|AC161444.4| Mus musculus chromosome 1, clone RP23-446D9, complete sequence
          Length = 182353

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     acaaaataaaatgctgtaca 54
              ||||||||||||||||||||
Sbjct: 173742 acaaaataaaatgctgtaca 173761
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>gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete sequence
          Length = 31787

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ttcttcttcttctccgatct 369
             ||||||||||||||||||||
Sbjct: 10672 ttcttcttcttctccgatct 10653
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>gb|AC146459.3| Pan troglodytes BAC clone CH251-229E22 from Y, complete sequence
          Length = 191428

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    aacaaatttcccaacaaaataaaa 45
             |||||| |||||||||||||||||
Sbjct: 60379 aacaaaattcccaacaaaataaaa 60402
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>gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, complete sequence
          Length = 213500

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     aacaaatttcccaacaaaataaaa 45
              |||||| |||||||||||||||||
Sbjct: 207843 aacaaaattcccaacaaaataaaa 207866
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>gb|AC124763.4| Mus musculus BAC clone RP23-158P17 from 12, complete sequence
          Length = 208489

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   aattccaattggccagtatt 135
             ||||||||||||||||||||
Sbjct: 67319 aattccaattggccagtatt 67338
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>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56
          Length = 196247

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ttcttcttcttctccgatct 369
             ||||||||||||||||||||
Sbjct: 33019 ttcttcttcttctccgatct 33038
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>emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC clone T8O5 (ESSAII project)
          Length = 83029

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ttcttcttcttctccgatct 369
             ||||||||||||||||||||
Sbjct: 31531 ttcttcttcttctccgatct 31550
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>emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on chromosome 11 Contains part
              of the gene for a novel protein (likely ortholog to homo
              sapiens FLJ38335), complete sequence
          Length = 198148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    tcctattcttcttcttctcc 364
              ||||||||||||||||||||
Sbjct: 144836 tcctattcttcttcttctcc 144817
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>dbj|BS000617.1| Pan troglodytes chromosome Y clone:PTB-206A19, complete sequences
          Length = 169081

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     aacaaatttcccaacaaaataaaa 45
              |||||| |||||||||||||||||
Sbjct: 122338 aacaaaattcccaacaaaataaaa 122315
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>dbj|BS000555.1| Pan troglodytes chromosome Y clone:PTB-439G17, complete sequences
          Length = 160463

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     aacaaatttcccaacaaaataaaa 45
              |||||| |||||||||||||||||
Sbjct: 158727 aacaaaattcccaacaaaataaaa 158704
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>emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in linkage group 1,
             complete sequence
          Length = 119612

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   tggcgatttcaaaataccag 308
             ||||||||||||||||||||
Sbjct: 28802 tggcgatttcaaaataccag 28783
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 22       aacaaatttcccaacaaaataaaa 45
                |||||| |||||||||||||||||
Sbjct: 14964843 aacaaaattcccaacaaaataaaa 14964866
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>gb|AC010048.5| Drosophila melanogaster 3L BAC RP98-5B23 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175316

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tttaatcaacaaatttccca 34
             ||||||||||||||||||||
Sbjct: 86779 tttaatcaacaaatttccca 86760
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>gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 map nga361, complete
             sequence
          Length = 100665

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ttcttcttcttctccgatct 369
             ||||||||||||||||||||
Sbjct: 56371 ttcttcttcttctccgatct 56352
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>gb|AC005897.3| Arabidopsis thaliana chromosome 2 clone T10J7 map mi398, complete
             sequence
          Length = 87119

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ttcttcttcttctccgatct 369
             ||||||||||||||||||||
Sbjct: 62631 ttcttcttcttctccgatct 62612
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>gb|AY065581.1| Zea mays clone tac 923.17 3' Ac insertion site sequence
          Length = 281

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 agtcctattcttcttcttct 362
           ||||||||||||||||||||
Sbjct: 152 agtcctattcttcttcttct 133
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>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence
          Length = 195108

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tatcttgtcctttccttttc 397
             ||||||||||||||||||||
Sbjct: 24260 tatcttgtcctttccttttc 24279
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>gb|AC008589.6| Homo sapiens chromosome 5 clone CTC-574I1, complete sequence
          Length = 121272

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   caacaaaataaaatgctgta 52
            ||||||||||||||||||||
Sbjct: 7482 caacaaaataaaatgctgta 7463
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>gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, complete sequence
          Length = 165604

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caacaaaataaaatgctgta 52
             ||||||||||||||||||||
Sbjct: 13530 caacaaaataaaatgctgta 13511
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>gb|AC102488.11| Mus musculus chromosome 1, clone RP24-496O18, complete sequence
          Length = 127076

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     acaaaataaaatgctgtaca 54
              ||||||||||||||||||||
Sbjct: 112743 acaaaataaaatgctgtaca 112724
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 7        tccatcactttaatcaacaa 26
                ||||||||||||||||||||
Sbjct: 11403331 tccatcactttaatcaacaa 11403350
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>gb|AC093894.2| Homo sapiens BAC clone RP11-714E5 from 2, complete sequence
          Length = 105489

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   caacctctgcctccctctta 253
             ||||||||||||||||||||
Sbjct: 42361 caacctctgcctccctctta 42342
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>gb|AC008779.5|AC008779 Homo sapiens chromosome 5 clone CTD-2023H18, complete sequence
          Length = 123275

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caacaaaataaaatgctgta 52
             ||||||||||||||||||||
Sbjct: 49453 caacaaaataaaatgctgta 49434
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>gb|AC009494.2|AC009494 Homo sapiens BAC clone RP11-450B24 from Y, complete sequence
          Length = 188314

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     aacaaatttcccaacaaaataaaa 45
              |||||| |||||||||||||||||
Sbjct: 102679 aacaaaattcccaacaaaataaaa 102656
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>gb|AC064848.5| Homo sapiens BAC clone RP11-81F3 from 2, complete sequence
          Length = 135809

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    tttggcaacctctgcctccc 248
              ||||||||||||||||||||
Sbjct: 119759 tttggcaacctctgcctccc 119740
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>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I,
             complete sequence
          Length = 117585

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ttcttcttcttctccgatct 369
             ||||||||||||||||||||
Sbjct: 66126 ttcttcttcttctccgatct 66107
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>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0591A03
          Length = 147043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tccatcactttaatcaacaa 26
             ||||||||||||||||||||
Sbjct: 37019 tccatcactttaatcaacaa 37038
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>emb|AJ575247.1|LJA575247 Lotus japonicus nfr1 gene for Nod-factor receptor 1b, exons 1-12
          Length = 10253

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  ttgaggcatggtggtgccat 181
            ||||||||||||||||||||
Sbjct: 1966 ttgaggcatggtggtgccat 1985
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>emb|AJ575246.1|LJA575246 Lotus japonicus nfr1 gene for Nod-factor receptor 1a, exons 1-12
          Length = 10253

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  ttgaggcatggtggtgccat 181
            ||||||||||||||||||||
Sbjct: 1966 ttgaggcatggtggtgccat 1985
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>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete
              sequence
          Length = 278708

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     tttaatcaacaaatttccca 34
              ||||||||||||||||||||
Sbjct: 251673 tttaatcaacaaatttccca 251654
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>gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome 12, complete sequence
          Length = 211561

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   aattccaattggccagtatt 135
             ||||||||||||||||||||
Sbjct: 35272 aattccaattggccagtatt 35253
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>dbj|AP001085.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-632K5, complete
            sequence
          Length = 175747

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   aaataaaatgctgtacagtc 57
            ||||||||||||||||||||
Sbjct: 7689 aaataaaatgctgtacagtc 7708
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>dbj|AP000577.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-51L7, complete
             sequence
          Length = 122381

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aaataaaatgctgtacagtc 57
             ||||||||||||||||||||
Sbjct: 83287 aaataaaatgctgtacagtc 83306
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>emb|CT573093.3| CH250-1K10, complete sequence
          Length = 185363

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    aggctttggagaggcttctc 288
              ||||||||||||||||||||
Sbjct: 176272 aggctttggagaggcttctc 176291
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>gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complete sequence
          Length = 195371

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    atttcccaacaaaataaaat 46
             ||||||||||||||||||||
Sbjct: 70887 atttcccaacaaaataaaat 70906
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>emb|AL928901.8| Zebrafish DNA sequence from clone CH211-155M12 in linkage group 5,
             complete sequence
          Length = 145957

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tgaagcaaatggtacaacaa 159
             ||||||||||||||||||||
Sbjct: 22996 tgaagcaaatggtacaacaa 23015
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>gb|AC156158.1| Homo sapiens chromosome 10 clone WI2-1708O12, complete sequence
          Length = 43308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   gcaacctctgcctccctctt 252
             ||||||||||||||||||||
Sbjct: 33975 gcaacctctgcctccctctt 33994
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>dbj|AP006536.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT05B16, TM0545,
             complete sequence
          Length = 66136

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ttgaggcatggtggtgccat 181
             ||||||||||||||||||||
Sbjct: 51933 ttgaggcatggtggtgccat 51952
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>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200,
             complete sequence
          Length = 91393

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 165   aggcatggtggtgccatagggttt 188
             ||||||||||||||||| ||||||
Sbjct: 39695 aggcatggtggtgccatggggttt 39672
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>gb|AC166175.2| Mus musculus BAC clone RP23-53H1 from chromosome 9, complete sequence
          Length = 264591

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   ttcaaaataccaggatcaga 315
             ||||||||||||||||||||
Sbjct: 20107 ttcaaaataccaggatcaga 20126
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>dbj|AP004515.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT04F23, TM0044a,
             complete sequence
          Length = 65620

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ttgaggcatggtggtgccat 181
             ||||||||||||||||||||
Sbjct: 60638 ttgaggcatggtggtgccat 60657
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>emb|AL663101.8| Mouse DNA sequence from clone RP23-205M7 on chromosome X, complete
              sequence
          Length = 216297

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    atctaccaccactatcttgt 385
              ||||||||||||||||||||
Sbjct: 212785 atctaccaccactatcttgt 212804
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>gb|J04804.1|CELDEB1A C.elegans vinculin (deb-1) gene, complete cds
          Length = 12263

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 ttcttcttcttctccgatct 369
           ||||||||||||||||||||
Sbjct: 890 ttcttcttcttctccgatct 909


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,795,996
Number of Sequences: 3902068
Number of extensions: 6795996
Number of successful extensions: 376409
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 375975
Number of HSP's gapped (non-prelim): 434
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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