ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl25a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RAD9B_MOUSE (Q6WBX7) Cell cycle checkpoint control protein RAD9B... 33 0.21
2RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B h... 33 0.27
3DPP6_HUMAN (P42658) Dipeptidyl aminopeptidase-like protein 6 (Di... 28 8.7

>RAD9B_MOUSE (Q6WBX7) Cell cycle checkpoint control protein RAD9B homolog (RAD9|
           homolog B) (mRAD9B)
          Length = 403

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 172 LWLCPLREGQTRRRCLSCHVVYNYLFFSSL 83
           LWL P  +G   R   SCH  Y Y+ FSS+
Sbjct: 28  LWLDPSEKGLALRSVNSCHSTYGYVLFSSM 57



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>RAD9B_RAT (Q499V3) Cell cycle checkpoint control protein RAD9B homolog (RAD9|
           homolog B)
          Length = 398

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 172 LWLCPLREGQTRRRCLSCHVVYNYLFFSSL 83
           LWL P  +G   R   SCH  Y Y+ FSS+
Sbjct: 23  LWLDPSEKGLALRSVNSCHSTYGYVLFSSV 52



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>DPP6_HUMAN (P42658) Dipeptidyl aminopeptidase-like protein 6|
           (Dipeptidylpeptidase VI) (Dipeptidylpeptidase 6)
           (Dipeptidyl peptidase IV-like protein) (Dipeptidyl
           aminopeptidase-related protein) (DPPX)
          Length = 865

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 151 EGQTRRRCLSCHVVYNYLFFSS 86
           EG   R+CLSC +V N  +FS+
Sbjct: 520 EGNFNRQCLSCDLVENCTYFSA 541


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,096,200
Number of Sequences: 219361
Number of extensions: 263048
Number of successful extensions: 491
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 80,573,946
effective HSP length: 38
effective length of database: 72,238,228
effective search space used: 1733717472
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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