ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl25a04 |
|---|---|
| Clone Library Name | barley_pub |
>IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 33.9 bits (76), Expect = 0.095 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 10/79 (12%) Frame = -2 Query: 403 LKKEEFIEFFDEYIKVDAPQRRTVSVQVFS---------GNHSAEFKKAIAE-DDLPKTC 254 L K++ I+F+ E + VDAP+R VSV V + G ++ ++E LP+ Sbjct: 931 LSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEAPPLPQPE 990 Query: 253 RITDIFGFKRSRPLHRSLK 197 I ++ FKR PL +K Sbjct: 991 VIHNMTEFKRGLPLFPLVK 1009
>IDE_HUMAN (P14735) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1018 Score = 33.9 bits (76), Expect = 0.095 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = -2 Query: 403 LKKEEFIEFFDEYIKVDAPQRRTVSVQVFS 314 L KE+ I+F+ E + VDAP+R VSV V + Sbjct: 930 LTKEDIIKFYKEMLAVDAPRRHKVSVHVLA 959
>IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 33.5 bits (75), Expect = 0.12 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Frame = -2 Query: 403 LKKEEFIEFFDEYIKVDAPQRRTVSVQVFS---------GNHSAEFKKAIAE-DDLPKTC 254 L K++ I F+ E + VDAP+R VSV V + G ++ ++E LP+ Sbjct: 931 LTKDDIIRFYQEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEAPPLPQPE 990 Query: 253 RITDIFGFKRSRPLHRSLK 197 I ++ FKR PL +K Sbjct: 991 VIHNMTEFKRGLPLFPLVK 1009
>SH2D5_PONPY (Q5R732) SH2 domain-containing protein 5| Length = 339 Score = 32.0 bits (71), Expect = 0.36 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -1 Query: 359 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 189 G P K S GL R+PFGR D+ L +R + + + S P +EGR+ Sbjct: 81 GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136 Query: 188 RPDHNGLTYC 159 R G YC Sbjct: 137 RHARLGNPYC 146
>SH2D5_HUMAN (Q6ZV89) SH2 domain-containing protein 5| Length = 339 Score = 32.0 bits (71), Expect = 0.36 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -1 Query: 359 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 189 G P K S GL R+PFGR D+ L +R + + + S P +EGR+ Sbjct: 81 GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136 Query: 188 RPDHNGLTYC 159 R G YC Sbjct: 137 RHARLGNPYC 146
>RUVA_SYMTH (Q67Q98) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 205 Score = 30.4 bits (67), Expect = 1.0 Identities = 21/68 (30%), Positives = 36/68 (52%) Frame = -2 Query: 382 EFFDEYIKVDAPQRRTVSVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPLHRS 203 + F+ ++VD + V++ V S A F++A+A +DL CR+ I G K ++ L Sbjct: 70 DLFELLLRVDGVGPK-VALAVLSTTDPAAFRRAVAFEDLDAICRVPGI-GRKTAQRLVLE 127 Query: 202 LKGGPGRI 179 LK G + Sbjct: 128 LKDKIGAV 135
>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)| Length = 416 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 Query: 106 QNWVHACGDRLCTTLQTMQ 162 QN + ACGDRLC TL Q Sbjct: 67 QNRIRACGDRLCLTLSRAQ 85
>SPB8_BOVIN (Q5BIR5) Serpin B8| Length = 374 Score = 28.9 bits (63), Expect = 3.0 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 202 ASGAEAVIA*SRICR*SGKFWAGHP 276 A+GA AV+ SR CR KF A HP Sbjct: 328 AAGATAVVRNSRCCRMEPKFCADHP 352
>LY9_MOUSE (Q01965) T-lymphocyte surface antigen Ly-9 precursor (Lymphocyte| antigen 9) (Cell-surface molecule Ly-9) Length = 654 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/44 (22%), Positives = 22/44 (50%) Frame = -2 Query: 343 RRTVSVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPL 212 R + + G+H+ +++ + DLP TC+ + S+P+ Sbjct: 193 REDTHLNTYDGSHTLRVSQSVCDPDLPYTCKAWNPVSQNSSQPV 236
>PT1_MYCGE (P47668) Phosphoenolpyruvate-protein phosphotransferase (EC| 2.7.3.9) (Phosphotransferase system, enzyme I) Length = 572 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = +1 Query: 34 YMVYSIHDGLMALCNRVRPSRKINQNWVHACGDRLCTTLQTMQYVSPL*SGLDLPSAS 207 Y+ ++ L+ L V K+N W CG+ + + QY PL GL L S Sbjct: 468 YLYQPLNPALLRLIKLVVEGGKLNNVWTGMCGE-----MASDQYAIPLLLGLGLTELS 520
>FEOB_LEGPL (Q5WTE1) Ferrous iron transport protein B| Length = 751 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 48 HT*WINGIVQSCATIEKNQSKLGSCVW*QTMYYTADHAVCQSI 176 H ++ GI + +I N S+LGS +W AD + QS+ Sbjct: 601 HFDFLGGIKAAFGSIPANLSELGSALWNPVSASAADSELSQSV 643
>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3| Length = 3497 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +2 Query: 275 LGDRLLELCRMVAAEDLHAHCPPLRGVHLYVL 370 L R ++ +++ AED+H H P + + +YV+ Sbjct: 192 LAHRHFKIEKLLDAEDVHTHKPDNKSIQMYVM 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,866,025 Number of Sequences: 219361 Number of extensions: 1354311 Number of successful extensions: 3004 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3004 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
