>Y355_HAEIN (Q57306) Hypothetical ABC transporter permease protein HI0355|
          Length = 245

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 214 SKLIRSVPMLY-EESLACYSFVRKANCLWLDIFKTFTL 104
           SK++ SV ++Y   + ACY  +R     WLD+ KTF +
Sbjct: 118 SKIVMSVLIIYFPVTAACYDGLRNTPQAWLDLAKTFNI 155

>CBF3A_YEAST (P32504) Centromere DNA-binding protein complex CBF3 subunit A|
           (Kinetochore protein CTF14) (Centromere-binding factor
           2)
          Length = 956

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/78 (23%), Positives = 35/78 (44%)
 Frame = -3

Query: 331 QVPVASSAHLKFLDMPSTSSGDSLMCSKEESVVETNKIDSKLIRSVPMLYEESLACYSFV 152
           Q  +A+  +L+F  +PS S GD       +        +  L++ +P+L  +SL  Y   
Sbjct: 283 QTTLAAYLYLRFYGIPSVSKGDGFPNLNADE-------NGSLLQDIPILRGKSLTTYPRE 335

Query: 151 RKANCLWLDIFKTFTLPF 98
              +  +  +F+   LP+
Sbjct: 336 ETFSNYYTTVFRYCHLPY 353

>MYOH_DICDI (P54696) Myosin IH heavy chain (Fragment)|
          Length = 99

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 298 FLDMPSTSSGDSLMCSKEESVVETNKIDSKLIRSVPML 185
           F  M    +G +     EE +VE N I++++I+S P+L
Sbjct: 9   FAAMGEKGNGVNTSLISEEDIVEGNNIETQVIKSTPIL 46

>RHGB_ASPAC (Q00019) Rhamnogalacturonase B precursor (EC 4.2.2.-)|
           (Rhamnogalacturonan lyase) (RGase B) (RHG B)
          Length = 527

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 2   NKKLSYYFTLSNLGCFSSPNMQAGYYT*IFYR 97
           N    Y+   S+ G F+SP M+ G YT ++Y+
Sbjct: 298 NDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQ 329

>CML2_MOUSE (Q8BMP4) Chemokine receptor-like 2 (G-protein coupled receptor 30)|
          Length = 375

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 181 EESLACYSFVRKANCLWLDIFKTFTLPFSIKYLC 80
           EE+  C++ VR+    WL++   F +PF+I  LC
Sbjct: 202 EEACFCFADVREVQ--WLEVTLGFIMPFAIIGLC 233

>LACS_LACSL (P23826) Bacteriocin lactocin-S precursor|
          Length = 68

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/67 (22%), Positives = 34/67 (50%)
 Frame = -3

Query: 337 LDQVPVASSAHLKFLDMPSTSSGDSLMCSKEESVVETNKIDSKLIRSVPMLYEESLACYS 158
           LD++ + +SA +   D+ S+ + DS        V+ +  +  +L+ +  +LY +   C+ 
Sbjct: 8   LDELSLHASAKMGARDVESSMNADST------PVLASVAVSMELLPTASVLYSDVAGCFK 61

Query: 157 FVRKANC 137
           +  K +C
Sbjct: 62  YSAKHHC 68

>YNX5_CAEEL (P34578) Hypothetical protein T20G5.5 in chromosome III|
          Length = 1234

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = +3

Query: 84  KYFIEKGSVNVLKM--SNHKQFALRTNE*HARLSSYNIGTERINLESILFV--STTDSSL 251
           K   + G +   KM   NH+     T E H R+ +  IG E I+    LFV  STT SSL
Sbjct: 415 KQIRDSGGILHRKMLTDNHQVIRDITTE-HTRVQNCMIGAEMIDWLLTLFVSTSTTCSSL 473

Query: 252 EHIKLS 269
             I++S
Sbjct: 474 SRIQMS 479

>CML2_RAT (O08878) Chemokine receptor-like 2 (G-protein coupled receptor 30)|
           (G-protein coupled receptor 41)
          Length = 375

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 181 EESLACYSFVRKANCLWLDIFKTFTLPFSIKYLC 80
           EE+  C++ VR+    WL++   F +PF+I  LC
Sbjct: 202 EEACFCFADVREVQ--WLEVTLGFIVPFAIIGLC 233

>CHS2_EXODE (P30601) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2) (Class-I chitin
           synthase 2)
          Length = 928

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 232 ETNKIDSKLIRSVPMLYEESLACYSFVRKANCLWL 128
           ET   D+ +  +   L E+ + C+  V K NC W+
Sbjct: 509 ETMHADAGVFTANMYLAEDRILCFELVSKRNCRWI 543

>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor|
          Length = 4010

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 298  FLDMPSTSSGDSLMCSKEESVVETNKIDSKLIRSVPMLYEESLACYS 158
            F D+PS      L+  KE+  V    +   +IRS  + YE S+ CY+
Sbjct: 2913 FQDVPSMQFSKDLLLVKEKEGV----LHIPIIRSGDLSYESSVRCYT 2955

>AROB_CLOTE (Q894C9) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 373

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 18/101 (17%)
 Frame = +3

Query: 36  TLGVSVRQTCRQDITHKYFIEKGSVNVLKMSNH-----KQFALRTNE*HARLS------- 179
           T+G ++  T +  ITH   +  G +  LK+S H     K    R  + + +L        
Sbjct: 263 TIGHAIEMTSKNKITHGEAVALGMLVSLKLSEHIYGLDKNLYYRMEKLYKKLGLPTKYKV 322

Query: 180 ------SYNIGTERINLESILFVSTTDSSLEHIKLSPDEVE 284
                  Y I  ++ N ++I FV   D     +K+  ++ E
Sbjct: 323 DNYNLFMYAINHDKKNKDNIRFVLLKDVEKPEVKIEVNKEE 363

>ERG1_RAT (P52020) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)|
           (SE)
          Length = 573

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 179 GEPGMLLICAQSKLLMVRHFQD--IYATFF 96
           G  G+L I +   LL++RHF    +YAT+F
Sbjct: 503 GPVGLLSILSPDPLLLIRHFFSVAVYATYF 532

>CBIO2_MYCMO (Q6KHL1) Cobalt import ATP-binding protein cbiO 2|
          Length = 274

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
 Frame = -3

Query: 277 SSGDSLMCSKEESVVETNKID-------SKLIRSVPMLYEE 176
           +SGD L   K E V+E  KID       SKL+++V   Y++
Sbjct: 225 ASGDPLEILKNERVIEIAKIDSPFIYRVSKLLKNVDPTYDQ 265


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,418,279
Number of Sequences: 219361
Number of extensions: 835035
Number of successful extensions: 1966
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)