>ref|XM_466273.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2782

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 171  aggctctcctcatataacataggaac 196
            |||||||||||||| |||||||||||
Sbjct: 2629 aggctctcctcatacaacataggaac 2604

>ref|XM_506830.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.16 mRNA
          Length = 3376

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 171  aggctctcctcatataacataggaac 196
            |||||||||||||| |||||||||||
Sbjct: 3166 aggctctcctcatacaacataggaac 3141

>gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 219273

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 240   gactcttctttggagcacatca 261
             ||||||||||||||||||||||
Sbjct: 56803 gactcttctttggagcacatca 56824

>gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-425H6, complete
             sequence
          Length = 152757

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 240   gactcttctttggagcacatca 261
             ||||||||||||||||||||||
Sbjct: 50336 gactcttctttggagcacatca 50315

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 171      aggctctcctcatataacataggaac 196
                |||||||||||||| |||||||||||
Sbjct: 21415958 aggctctcctcatacaacataggaac 21415983

>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 240    gactcttctttggagcacatca 261
              ||||||||||||||||||||||
Sbjct: 386357 gactcttctttggagcacatca 386336

>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020C11
          Length = 163328

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 171   aggctctcctcatataacataggaac 196
             |||||||||||||| |||||||||||
Sbjct: 10885 aggctctcctcatacaacataggaac 10910

>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 171   aggctctcctcatataacataggaac 196
             |||||||||||||| |||||||||||
Sbjct: 75911 aggctctcctcatacaacataggaac 75936

>dbj|AK121794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095G22, full
            insert sequence
          Length = 3376

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 171  aggctctcctcatataacataggaac 196
            |||||||||||||| |||||||||||
Sbjct: 3166 aggctctcctcatacaacataggaac 3141

>dbj|AK067547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A18, full
            insert sequence
          Length = 2782

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 171  aggctctcctcatataacataggaac 196
            |||||||||||||| |||||||||||
Sbjct: 2629 aggctctcctcatacaacataggaac 2604

>gb|AY176327.1| Staphylococcus phage K, complete genome
          Length = 127395

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   ataaatattttatagaaaaag 102
            |||||||||||||||||||||
Sbjct: 3562 ataaatattttatagaaaaag 3542

>emb|AL589946.4| Human DNA sequence from clone RP11-124I4 on chromosome 6 Contains the
             3' end of the TINAG gene for tubulointerstitial nephritis
             antigen and a novel gene, complete sequence
          Length = 85086

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    aggatattacacataaatatt 90
             |||||||||||||||||||||
Sbjct: 38086 aggatattacacataaatatt 38106

>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     taaatattttatagaaaaagg 103
              |||||||||||||||||||||
Sbjct: 173775 taaatattttatagaaaaagg 173795

>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22
          Length = 73803

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    tattttacattatcaaacctt 40
             |||||||||||||||||||||
Sbjct: 59698 tattttacattatcaaacctt 59718

>emb|BX005060.12| Zebrafish DNA sequence from clone CH211-265G22 in linkage group 2,
             complete sequence
          Length = 98512

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   aaatgtcttgaaaatgtctaa 130
             |||||||||||||||||||||
Sbjct: 87726 aaatgtcttgaaaatgtctaa 87746

>gb|AC107021.4| Homo sapiens 3 BAC RP11-274H2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161731

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    taaatattttatagaaaaagg 103
             |||||||||||||||||||||
Sbjct: 92576 taaatattttatagaaaaagg 92596

>gb|AY954969.1| Bacteriophage G1, complete genome
          Length = 138715

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     ataaatattttatagaaaaag 102
              |||||||||||||||||||||
Sbjct: 107063 ataaatattttatagaaaaag 107043

>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence
          Length = 174156

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    tacacataaatattttatagaaaa 100
             ||||| ||||||||||||||||||
Sbjct: 87785 tacacttaaatattttatagaaaa 87808

>ref|XM_471508.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2601

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  tttgctttgcgcacaaatga 160
            ||||||||||||||||||||
Sbjct: 2188 tttgctttgcgcacaaatga 2169

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     ctccaccaccgactcttctt 249
               ||||||||||||||||||||
Sbjct: 1972694 ctccaccaccgactcttctt 1972713

>gb|AC123956.3| Mus musculus BAC clone RP23-292A11 from chromosome 16, complete sequence
          Length = 191989

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     gatattacacataaatattt 91
              ||||||||||||||||||||
Sbjct: 184785 gatattacacataaatattt 184766

>gb|AC117656.13| Mus musculus chromosome 14, clone RP23-298L3, complete sequence
          Length = 228361

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ttacacataaatattttata 95
             ||||||||||||||||||||
Sbjct: 57281 ttacacataaatattttata 57300

>emb|BX950201.12| Zebrafish DNA sequence from clone CH211-101L11 in linkage group 1,
             complete sequence
          Length = 167099

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 289   tatcaagaaacttaaggtgtgcac 312
             |||||| |||||||||||||||||
Sbjct: 66199 tatcaaaaaacttaaggtgtgcac 66176

>gb|AC126936.4| Mus musculus BAC clone RP24-196L14 from chromosome 16, complete
             sequence
          Length = 177785

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gatattacacataaatattt 91
             ||||||||||||||||||||
Sbjct: 40534 gatattacacataaatattt 40515

>gb|AC111144.8| Mus musculus chromosome 6, clone RP23-373C23, complete sequence
          Length = 198667

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    accgactcttctttggagca 256
              ||||||||||||||||||||
Sbjct: 120184 accgactcttctttggagca 120165

>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aaaatgtctaaccataagca 139
             ||||||||||||||||||||
Sbjct: 57521 aaaatgtctaaccataagca 57502

>emb|BX927104.11| Zebrafish DNA sequence from clone CH211-210P22 in linkage group 17,
              complete sequence
          Length = 146265

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    taaatgtcttgaaaatgtct 128
              ||||||||||||||||||||
Sbjct: 142532 taaatgtcttgaaaatgtct 142513

>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence
          Length = 181602

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     tacacataaatattttatagaaaa 100
              |||||| |||||||||||||||||
Sbjct: 163869 tacacaaaaatattttatagaaaa 163892

>gb|AC103805.7| Homo sapiens chromosome 18, clone RP11-1061K3, complete sequence
          Length = 184147

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     tacacataaatattttatagaaaa 100
              |||||| |||||||||||||||||
Sbjct: 179623 tacacaaaaatattttatagaaaa 179600

>emb|BX248514.3| Zebrafish DNA sequence from clone CH211-237A6 in linkage group 1,
             complete sequence
          Length = 165693

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 289   tatcaagaaacttaaggtgtgcac 312
             |||||| |||||||||||||||||
Sbjct: 68290 tatcaaaaaacttaaggtgtgcac 68267

>emb|BX072531.6| Zebrafish DNA sequence from clone CH211-188A22, complete sequence
          Length = 156372

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    attttacattatcaaacctt 40
             ||||||||||||||||||||
Sbjct: 89650 attttacattatcaaacctt 89669

>gb|AC102466.11| Mus musculus chromosome 3, clone RP24-337A2, complete sequence
          Length = 164455

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aaatgtcttgaaaatgtcta 129
             ||||||||||||||||||||
Sbjct: 15546 aaatgtcttgaaaatgtcta 15527

>emb|AL110479.1|CEY105C5B Caenorhabditis elegans YAC Y105C5B, complete sequence
          Length = 321304

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     taaatattttatagaaaaag 102
              ||||||||||||||||||||
Sbjct: 223408 taaatattttatagaaaaag 223427

>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome
          Length = 236120

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ataaatattttatagaaaaa 101
             ||||||||||||||||||||
Sbjct: 32253 ataaatattttatagaaaaa 32234

>emb|AL929315.8| Zebrafish DNA sequence from clone CH211-69K21, complete sequence
          Length = 174143

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ttacacataaatattttata 95
             ||||||||||||||||||||
Sbjct: 10212 ttacacataaatattttata 10193

>emb|AL132666.8|CNS01DT8 Human chromosome 14 DNA sequence BAC R-16N22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     taaatattttatagaaaaag 102
              ||||||||||||||||||||
Sbjct: 113214 taaatattttatagaaaaag 113195

>emb|AL732310.10| Mouse DNA sequence from clone RP24-223B6 on chromosome 2, complete
             sequence
          Length = 63015

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gatattacacataaatattt 91
             ||||||||||||||||||||
Sbjct: 50154 gatattacacataaatattt 50135


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,794,341
Number of Sequences: 3902068
Number of extensions: 3794341
Number of successful extensions: 80817
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80697
Number of HSP's gapped (non-prelim): 120
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)