ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTAL2_PICAN (Q707Y8) Mating-type protein ALPHA2 (MATalpha2 trans... 30 2.0

>MTAL2_PICAN (Q707Y8) Mating-type protein ALPHA2 (MATalpha2 transcription|
           factor)
          Length = 163

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 168 DKTVAIQKELCFHISQDTRLPPNDI 242
           ++T+ I KEL   ++QDTR  PND+
Sbjct: 138 ERTLTISKELSDLLNQDTRCSPNDV 162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,450,565
Number of Sequences: 219361
Number of extensions: 566351
Number of successful extensions: 1003
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top