Clone Name | rbastl24g06 |
---|---|
Clone Library Name | barley_pub |
>gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, complete sequence Length = 179918 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 atatagtccctctttctta 31 ||||||||||||||||||| Sbjct: 152528 atatagtccctctttctta 152546
>gb|AC093677.4| Homo sapiens BAC clone RP11-629B11 from 4, complete sequence Length = 148179 Score = 38.2 bits (19), Expect = 1.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ataaatatagtccctcttt 27 ||||||||||||||||||| Sbjct: 17171 ataaatatagtccctcttt 17189
>emb|AL451086.6| Human DNA sequence from clone RP11-265D20 on chromosome X, complete sequence Length = 111040 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 tggcataaatatagtccc 22 |||||||||||||||||| Sbjct: 9994 tggcataaatatagtccc 10011
>gb|AC114318.2| Homo sapiens chromosome 5 clone RP11-425E13, complete sequence Length = 163593 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tagtccctctttcttact 33 |||||||||||||||||| Sbjct: 125745 tagtccctctttcttact 125728
>gb|AC110009.3| Homo sapiens chromosome 5 clone RP11-508M8, complete sequence Length = 137632 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tagtccctctttcttact 33 |||||||||||||||||| Sbjct: 32789 tagtccctctttcttact 32772
>gb|AC069077.7| Homo sapiens chromosome 10 clone RP11-418N10, complete sequence Length = 160384 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 ctaatggcataaatatag 18 |||||||||||||||||| Sbjct: 116183 ctaatggcataaatatag 116166
>gb|AC098873.3| Homo sapiens BAC clone RP11-793H20 from 4, complete sequence Length = 119147 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tatagtccctctttctta 31 |||||||||||||||||| Sbjct: 61475 tatagtccctctttctta 61458
>gb|AC160056.2| Pan troglodytes BAC clone CH251-490K14 from chromosome unknown, complete sequence Length = 180991 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tatagtccctctttctta 31 |||||||||||||||||| Sbjct: 154038 tatagtccctctttctta 154021 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 347,874 Number of Sequences: 3902068 Number of extensions: 347874 Number of successful extensions: 85027 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85010 Number of HSP's gapped (non-prelim): 17 length of query: 39 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 19 effective length of database: 17,155,003,908 effective search space: 325945074252 effective search space used: 325945074252 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)