Clone Name | rbastl24g01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RGF3_SCHPO (Q9Y7U5) Rho1 guanine nucleotide exchange factor 3 | 29 | 4.1 |
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>RGF3_SCHPO (Q9Y7U5) Rho1 guanine nucleotide exchange factor 3| Length = 1275 Score = 28.9 bits (63), Expect = 4.1 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +2 Query: 8 HAVCFFKNGRLLVVAATD-DRCLIFYKLFVHSGTTI 112 HAV FFK G+L A+ +R L+FYK + + TTI Sbjct: 1025 HAVSFFKIGKLSEGASVKRERTLVFYKEGLGNTTTI 1060 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,923,360 Number of Sequences: 219361 Number of extensions: 265524 Number of successful extensions: 742 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 728 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 742 length of database: 80,573,946 effective HSP length: 20 effective length of database: 76,186,726 effective search space used: 1828481424 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)