Clone Name | rbastl24g01 |
---|---|
Clone Library Name | barley_pub |
>emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chromosome 1 Contains a mitochondrial intermediate peptidase (MIPEP) pseudogene and a CpG island, complete sequence Length = 198794 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gattttctacaagcttttcg 92 |||||||||||||||||||| Sbjct: 127176 gattttctacaagcttttcg 127195
>emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 in linkage group 11, complete sequence Length = 199426 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 atgacagatgtctgatttt 78 ||||||||||||||||||| Sbjct: 108691 atgacagatgtctgatttt 108709
>emb|AL390065.20| Human DNA sequence from clone RP11-520M5 on chromosome 4, complete sequence Length = 157119 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 112 ttcttacagatgaggggtg 130 ||||||||||||||||||| Sbjct: 45050 ttcttacagatgaggggtg 45032
>emb|BX640518.5| Zebrafish DNA sequence from clone DKEY-278M12 in linkage group 24, complete sequence Length = 215186 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 atgacagatgtctgatttt 78 ||||||||||||||||||| Sbjct: 13135 atgacagatgtctgatttt 13117
>ref|NM_001001048.1| Rattus norvegicus olfactory receptor 372 (predicted) (Olr372_predicted), mRNA Length = 951 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ctgcaacggatgacagatg 69 ||||||||||||||||||| Sbjct: 393 ctgcaacggatgacagatg 375
>gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete sequence Length = 175938 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ggctccttgtggtggctgc 54 ||||||||||||||||||| Sbjct: 15570 ggctccttgtggtggctgc 15588
>dbj|AK129324.1| Mus musculus mRNA for mKIAA1288 protein Length = 6127 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ggtggctgcaacggatgac 64 ||||||||||||||||||| Sbjct: 2287 ggtggctgcaacggatgac 2305
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 gtatgcttcttcaagaatg 32 ||||||||||||||||||| Sbjct: 1808845 gtatgcttcttcaagaatg 1808827
>gb|AC116511.15| Mus musculus chromosome 8, clone RP24-314H15, complete sequence Length = 197718 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ggtggctgcaacggatgac 64 ||||||||||||||||||| Sbjct: 51036 ggtggctgcaacggatgac 51054
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence Length = 221208 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 accatttcttacagatgag 125 ||||||||||||||||||| Sbjct: 205538 accatttcttacagatgag 205520
>emb|Z68192.1|HSL195C9 Human DNA sequence from clone LA04NC01-195C9 on chromosome 4, complete sequence Length = 23769 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 112 ttcttacagatgaggggtg 130 ||||||||||||||||||| Sbjct: 20113 ttcttacagatgaggggtg 20095
>emb|AL713990.16| Mouse DNA sequence from clone RP23-224N1 on chromosome X, complete sequence Length = 163330 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 tgacagatgtctgattttc 79 ||||||||||||||||||| Sbjct: 47719 tgacagatgtctgattttc 47701
>emb|AL929306.4| Zebrafish DNA sequence from clone CH211-145C5 in linkage group 11, complete sequence Length = 176222 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 atgacagatgtctgatttt 78 ||||||||||||||||||| Sbjct: 113612 atgacagatgtctgatttt 113630 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,022,593 Number of Sequences: 3902068 Number of extensions: 1022593 Number of successful extensions: 64660 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64634 Number of HSP's gapped (non-prelim): 26 length of query: 136 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 115 effective length of database: 17,151,101,840 effective search space: 1972376711600 effective search space used: 1972376711600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)