>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 6e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 29       aatggatgctcgtcaatttacaagctgca 57
                |||||| ||||||||||||||||||||||
Sbjct: 12443255 aatggaagctcgtcaatttacaagctgca 12443227

>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14,
              complete sequence
          Length = 132560

 Score = 50.1 bits (25), Expect = 6e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 29     aatggatgctcgtcaatttacaagctgca 57
              |||||| ||||||||||||||||||||||
Sbjct: 100937 aatggaagctcgtcaatttacaagctgca 100909

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 6e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 29       aatggatgctcgtcaatttacaagctgca 57
                |||||| ||||||||||||||||||||||
Sbjct: 12440018 aatggaagctcgtcaatttacaagctgca 12439990

>dbj|AK068503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153C08, full
            insert sequence
          Length = 3677

 Score = 50.1 bits (25), Expect = 6e-04
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 29   aatggatgctcgtcaatttacaagctgca 57
            |||||| ||||||||||||||||||||||
Sbjct: 3453 aatggaagctcgtcaatttacaagctgca 3425

>emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on chromosome Xp11.3-11.4
             Contains part of a novel gene, complete sequence
          Length = 166715

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    tgataccaaatggatgctc 39
             |||||||||||||||||||
Sbjct: 66788 tgataccaaatggatgctc 66770

>gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 map human ortholog p11.4,
              complete sequence
          Length = 225601

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     tgataccaaatggatgctc 39
              |||||||||||||||||||
Sbjct: 205865 tgataccaaatggatgctc 205883

>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 43      aatttacaagctgcaaac 60
               ||||||||||||||||||
Sbjct: 1129438 aatttacaagctgcaaac 1129421

>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 43    aatttacaagctgcaaac 60
             ||||||||||||||||||
Sbjct: 18139 aatttacaagctgcaaac 18156

>gb|AY190943.1| Drosophila virilis clone DVIF01_25_B23 (D1415) genomic sequence
          Length = 35983

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 42    caatttacaagctgcaaa 59
             ||||||||||||||||||
Sbjct: 19445 caatttacaagctgcaaa 19462

>gb|AF253465.2| Sagittula stellata putative LysR-type transcriptional regulator
            (pcaQ), putative para-hydroxybenzoate hydroxylase (pobA),
            putative gamma-carboxymuconolactone decarboxylase (pcaC),
            protocatechuate 3,4-dioxygenase beta subunit (pcaH),
            protocatechuate 3,4-dioxygenase alpha subunit (pcaG), and
            hypothetical protein genes, complete cds
          Length = 6120

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 41   tcaatttacaagctgcaa 58
            ||||||||||||||||||
Sbjct: 1427 tcaatttacaagctgcaa 1444

>gb|AC127232.4| Mus musculus chromosome 15 clone RP24-555P18, complete sequence
          Length = 190930

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 44    atttacaagctgcaaacc 61
             ||||||||||||||||||
Sbjct: 18227 atttacaagctgcaaacc 18244

>ref|XM_819207.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 phosphatidylinositol
            4-kinase alpha (Tb927.3.4020) partial mRNA
          Length = 6939

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 43   aatttacaagctgcaaac 60
            ||||||||||||||||||
Sbjct: 4711 aatttacaagctgcaaac 4728

>emb|AL596163.1| Listeria innocua Clip11262 complete genome, segment 1/12
          Length = 231450

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 6      cggaagaataccctttga 23
              ||||||||||||||||||
Sbjct: 184061 cggaagaataccctttga 184044

>emb|BX640499.5| Zebrafish DNA sequence from clone DKEYP-67D2 in linkage group 9,
             complete sequence
          Length = 184606

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctttgataccaaatggat 35
             ||||||||||||||||||
Sbjct: 26408 ctttgataccaaatggat 26425

>ref|XM_678900.1| PREDICTED: Danio rerio similar to titin isoform N2-B (LOC556163), mRNA
          Length = 26100

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctttgataccaaatggat 35
             ||||||||||||||||||
Sbjct: 10567 ctttgataccaaatggat 10550

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 44      atttacaagctgcaaacc 61
               ||||||||||||||||||
Sbjct: 4167788 atttacaagctgcaaacc 4167771

>emb|BX833590.1|CNS0A0HP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL64ZE06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 685

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  ttgataccaaatggatgc 37
           ||||||||||||||||||
Sbjct: 574 ttgataccaaatggatgc 557

>gb|AC009474.4| Homo sapiens BAC clone RP11-179G23 from 2, complete sequence
          Length = 168651

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 40    gtcaatttacaagctgca 57
             ||||||||||||||||||
Sbjct: 87840 gtcaatttacaagctgca 87823

>emb|AL772356.2| Zebrafish DNA sequence from clone BUSM1-258D18 in linkage group 9,
             complete sequence
          Length = 80182

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctttgataccaaatggat 35
             ||||||||||||||||||
Sbjct: 30884 ctttgataccaaatggat 30867

>gb|AY952507.1| Schizura ipomeae dopa-decarboxylase (DDC) mRNA, partial cds
          Length = 1021

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 27  caaatggatgctcgtcaa 44
           ||||||||||||||||||
Sbjct: 589 caaatggatgctcgtcaa 606

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 44      atttacaagctgcaaacc 61
               ||||||||||||||||||
Sbjct: 4011274 atttacaagctgcaaacc 4011291

>emb|AL672250.8| Mouse DNA sequence from clone RP23-148F9 on chromosome 2, complete
             sequence
          Length = 199204

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 15    accctttgataccaaatg 32
             ||||||||||||||||||
Sbjct: 48655 accctttgataccaaatg 48638


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 393,140
Number of Sequences: 3902068
Number of extensions: 393140
Number of successful extensions: 20570
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20507
Number of HSP's gapped (non-prelim): 63
length of query: 61
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 40
effective length of database: 17,151,101,840
effective search space: 686044073600
effective search space used: 686044073600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)