ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 188 6e-45
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 84 3e-13
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 84 3e-13
4emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 84 3e-13
5emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2... 78 2e-11
6emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci... 78 2e-11
7dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
8dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
9emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 78 2e-11
10ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-04
11ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-04
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 54 2e-04
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 2e-04
14emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 54 2e-04
15gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 54 2e-04
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
17dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
18dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
19dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
20dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
21gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 52 9e-04
22gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 52 9e-04
23gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 52 9e-04
24gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 52 9e-04
25gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 50 0.003
26gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 50 0.003
27gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.003
28ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.014
29gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 48 0.014
30emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 48 0.014
31gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 48 0.014
32gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 48 0.014
33dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.014
34gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 48 0.014
35gb|AY103567.1| Zea mays PCO116252 mRNA sequence 48 0.014
36gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.014
37gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 48 0.014
38ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.22
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.22
40dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.22
41dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.22
42dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.22
43ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.85
44ref|XM_765094.1| Giardia lamblia ATCC 50803 hypothetical protein... 42 0.85
45emb|CR936441.6| Mouse DNA sequence from clone RP23-285D5 on chro... 42 0.85
46gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 42 0.85
47gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 42 0.85
48emb|AL596224.10| Human DNA sequence from clone RP11-26F12 on chr... 40 3.4
49gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 3.4
50gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 3.4 
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score =  188 bits (95), Expect = 6e-45
 Identities = 95/95 (100%)
 Strand = Plus / Minus

                                                                        
Query: 7    atcgtgtcctttaattataatttggtgctcattcccattatacccaccgccgggccaaga 66
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3033 atcgtgtcctttaattataatttggtgctcattcccattatacccaccgccgggccaaga 2974

                                               
Query: 67   gactgaagacactcttatttacgcctagttgagtt 101
            |||||||||||||||||||||||||||||||||||
Sbjct: 2973 gactgaagacactcttatttacgcctagttgagtt 2939



 Score =  170 bits (86), Expect = 1e-39
 Identities = 89/90 (98%)
 Strand = Plus / Minus

                                                                        
Query: 171  cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 2795

                                          
Query: 231  gtcggtttttccggtcggggtcgatgttcc 260
            ||||||||||||||||||||||| ||||||
Sbjct: 2794 gtcggtttttccggtcggggtcgttgttcc 2765



 Score =  141 bits (71), Expect = 1e-30
 Identities = 74/75 (98%)
 Strand = Plus / Minus

                                                                        
Query: 117  aggcagctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccg 176
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2923 aggcagctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccg 2864

                           
Query: 177  tgggatcaccgtccg 191
            |||||||||||||||
Sbjct: 2863 tgggatcaccgtccg 2849
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                          
Query: 121      agctcaaatggagatgctgttggggatgcccatctccatcac 162
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccatctccatcac 22970422



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                            
Query: 123      ctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggat 182
                ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 22888635 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22888694

                                                                       
Query: 183      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 237
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22888695 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22888749
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                          
Query: 121      agctcaaatggagatgctgttggggatgcccatctccatcac 162
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccatctccatcac 22898613



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                            
Query: 123      ctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggat 182
                ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 22816826 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22816885

                                                                       
Query: 183      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 237
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22816886 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22816940
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                       
Query: 121   agctcaaatggagatgctgttggggatgcccatctccatcac 162
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79740 agctcaaatggagatgctgttggggatgcccatctccatcac 79699
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>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene)
          Length = 3023

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  aaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggatcac 185
            ||||||| |||||||| || |||||||||||||||||  | ||  ||||| | |||| ||
Sbjct: 2892 aaatggaaatgctgttcggaatgcccatctccatcaccgttttagcgtccatcggattac 2833

                                                                       
Query: 186  cgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtttttccgg 244
            ||| | | |||||||||||||| |||||||| | |||||| ||||| |||||| |||||
Sbjct: 2832 cgttcaatggcctgagcagcacgtacggcactacgccggcaccgtggcggtttctccgg 2774
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>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene)
          Length = 3018

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 123  ctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggat 182
            ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 2817 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2758

                                                                   
Query: 183  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 237
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2757 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2703
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>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full
            insert sequence
          Length = 3080

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 123  ctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggat 182
            ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 2836 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2777

                                                                   
Query: 183  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 237
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2776 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2722
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>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full
            insert sequence
          Length = 2747

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 123  ctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggat 182
            ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 2343 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2284

                                                                   
Query: 183  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 237
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2283 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2229
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                         
Query: 123   ctcaaatggagatgctgttggggatgcccatctccatcactatcttctcgtccgtgggat 182
             ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 68209 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 68150

                                                                    
Query: 183   caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 237
             ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 68149 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 68095
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 2447 ctcagatggagatgctgttggggatgcccat 2417
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 2926 ctcagatggagatgctgttggggatgcccat 2896
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 123   ctcaaatggagatgctgttggggatgcccat 153
             |||| ||||||||||||||||||||||||||
Sbjct: 65817 ctcagatggagatgctgttggggatgcccat 65787



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 131   gagatgctgttggggatgccc 151
             |||||||||||||||||||||
Sbjct: 47230 gagatgctgttggggatgccc 47210
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 123      ctcaaatggagatgctgttggggatgcccat 153
                |||| ||||||||||||||||||||||||||
Sbjct: 27821687 ctcagatggagatgctgttggggatgcccat 27821657



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 123      ctcaaatggagatgctgttggggatgccc 151
                ||||||||| |||||||||||||||||||
Sbjct: 14300017 ctcaaatggtgatgctgttggggatgccc 14300045



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 128      atggagatgctgttggggatgccc 151
                ||||||||||||||||||||||||
Sbjct: 30026445 atggagatgctgttggggatgccc 30026422



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 131      gagatgctgttggggatgccc 151
                |||||||||||||||||||||
Sbjct: 27803100 gagatgctgttggggatgccc 27803080
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>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 124  tcaaatggagatgctgttggggatgcc 150
            |||||||||||||||||||||||||||
Sbjct: 2774 tcaaatggagatgctgttggggatgcc 2748



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 192  acggcctgagcagcacatacggcaccatgccggcgcc 228
            ||||| |||||||| | |||||||| |||||||||||
Sbjct: 2721 acggcttgagcagctcgtacggcacgatgccggcgcc 2685
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>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 2920 ctcagatggagatgctgttggggatgcccat 2890
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 123      ctcaaatggagatgctgttggggatgcccat 153
                |||| ||||||||||||||||||||||||||
Sbjct: 27913011 ctcagatggagatgctgttggggatgcccat 27912981



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 123      ctcaaatggagatgctgttggggatgccc 151
                ||||||||| |||||||||||||||||||
Sbjct: 14294992 ctcaaatggtgatgctgttggggatgccc 14295020



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 128      atggagatgctgttggggatgccc 151
                ||||||||||||||||||||||||
Sbjct: 30117867 atggagatgctgttggggatgccc 30117844



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 131      gagatgctgttggggatgccc 151
                |||||||||||||||||||||
Sbjct: 27894424 gagatgctgttggggatgccc 27894404
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 1333 ctcagatggagatgctgttggggatgcccat 1303
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>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 2598 ctcagatggagatgctgttggggatgcccat 2568
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 2928 ctcagatggagatgctgttggggatgcccat 2898
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 123  ctcaaatggagatgctgttggggatgcccat 153
            |||| ||||||||||||||||||||||||||
Sbjct: 1498 ctcagatggagatgctgttggggatgcccat 1468
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 122 gctcaaatggagatgctgttggggatgccc 151
           ||||| ||||||||||||||||||||||||
Sbjct: 755 gctcagatggagatgctgttggggatgccc 726
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 122  gctcaaatggagatgctgttggggatgccc 151
            ||||| ||||||||||||||||||||||||
Sbjct: 4664 gctcagatggagatgctgttggggatgccc 4635
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>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 120  cagctcaaatggagatgctgttggggatgcccat 153
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 2768 cagctcagatggagacgctgttggggatgcccat 2735
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 122  gctcaaatggagatgctgttggggatgccc 151
            ||||| ||||||||||||||||||||||||
Sbjct: 2066 gctcagatggagatgctgttggggatgccc 2037
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 123 ctcaaatggagatgctgttggggatgccc 151
           |||| ||||||||||||||||||||||||
Sbjct: 907 ctcagatggagatgctgttggggatgccc 879
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 123   ctcaaatggagatgctgttggggatgccc 151
             ||||||||| |||||||||||||||||||
Sbjct: 49246 ctcaaatggtgatgctgttggggatgccc 49274
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>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 123    ctcaaatggagatgctgttggggatgccc 151
              ||||||||| |||||||||||||||||||
Sbjct: 111405 ctcaaatggtgatgctgttggggatgccc 111433
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 2609 atggagatgctgttggggatgccc 2586
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 1082 atggagatgctgttggggatgccc 1059
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 2691 atggagatgctgttggggatgccc 2668
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 128   atggagatgctgttggggatgccc 151
             ||||||||||||||||||||||||
Sbjct: 81306 atggagatgctgttggggatgccc 81329
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 2591 atggagatgctgttggggatgccc 2568
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 2724 atggagatgctgttggggatgccc 2701
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 122 gctcaaatggagatgctgttggggatgcccat 153
           ||||| ||||||||||||||||| ||||||||
Sbjct: 369 gctcatatggagatgctgttgggaatgcccat 338
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 122  gctcaaatggagatgctgttggggatgcccat 153
            ||||| ||||||||||||||||| ||||||||
Sbjct: 2902 gctcatatggagatgctgttgggaatgcccat 2871
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>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 1552 atggagatgctgttggggatgccc 1529
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            ||||||||||||||||||||||||
Sbjct: 2653 atggagatgctgttggggatgccc 2630
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>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 192  acggcctgagcagcacatacggcaccatgccggcgccg 229
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2828 acggcttgagcagctcgtacggcacgatgccggcgccg 2791



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 123  ctcaaatggagatgctgttggggatgccc 151
            |||| |||||||||||||| |||||||||
Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 192     acggcctgagcagcacatacggcaccatgccggcgccg 229
               ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 5277016 acggcttgagcagctcgtacggcacgatgccggcgccg 5277053



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 123     ctcaaatggagatgctgttggggatgccc 151
               |||| |||||||||||||| |||||||||
Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 192  acggcctgagcagcacatacggcaccatgccggcgccg 229
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 3319 acggcttgagcagctcgtacggcacgatgccggcgccg 3356



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 123  ctcaaatggagatgctgttggggatgccc 151
            |||| |||||||||||||| |||||||||
Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 192  acggcctgagcagcacatacggcaccatgccggcgccg 229
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2827 acggcttgagcagctcgtacggcacgatgccggcgccg 2790



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 123  ctcaaatggagatgctgttggggatgccc 151
            |||| |||||||||||||| |||||||||
Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 192  acggcctgagcagcacatacggcaccatgccggcgccg 229
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 1989 acggcttgagcagctcgtacggcacgatgccggcgccg 1952



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 123  ctcaaatggagatgctgttggggatgccc 151
            |||| |||||||||||||| |||||||||
Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 131  gagatgctgttggggatgccc 151
            |||||||||||||||||||||
Sbjct: 2594 gagatgctgttggggatgccc 2574
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>ref|XM_765094.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_572_45746_48490)
            partial mRNA
          Length = 2745

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1    atatatatcgtgtcctttaat 21
            |||||||||||||||||||||
Sbjct: 2051 atatatatcgtgtcctttaat 2031
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>emb|CR936441.6| Mouse DNA sequence from clone RP23-285D5 on chromosome X, complete
             sequence
          Length = 112051

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   ccatctccatcactatcttct 170
             |||||||||||||||||||||
Sbjct: 65512 ccatctccatcactatcttct 65492
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   gagatgctgttggggatgccc 151
             |||||||||||||||||||||
Sbjct: 10793 gagatgctgttggggatgccc 10813
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 123  ctcaaatggagatgctgttggggatgccc 151
            ||||||||||||||||||| || ||||||
Sbjct: 2623 ctcaaatggagatgctgtttggaatgccc 2595
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>emb|AL596224.10| Human DNA sequence from clone RP11-26F12 on chromosome 1 Contains part
             of the CSMD2 gene for CUB and Sushi multiple domains 2,
             complete sequence
          Length = 114784

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    gtgtcctttaattataattt 29
             ||||||||||||||||||||
Sbjct: 67048 gtgtcctttaattataattt 67029
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 128 atggagatgctgttggggatgccc 151
           |||||||||||| |||||||||||
Sbjct: 138 atggagatgctgctggggatgccc 161
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 128  atggagatgctgttggggatgccc 151
            |||||||||||| |||||||||||
Sbjct: 1210 atggagatgctgctggggatgccc 1187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,676,324
Number of Sequences: 3902068
Number of extensions: 1676324
Number of successful extensions: 33925
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33746
Number of HSP's gapped (non-prelim): 178
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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