Clone Name | rbastl24f01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YPJA_BACSU (P54392) Hypothetical protein ypjA | 30 | 1.6 | 2 | T2R46_PAPHA (Q646G0) Taste receptor type 2 member 46 (T2R46) | 29 | 3.5 | 3 | REP1_ZYGBA (P13776) Trans-acting factor B (REP1) | 28 | 6.0 | 4 | SUT1_STYHA (P53391) High affinity sulphate transporter 1 | 28 | 6.0 | 5 | SUT2_STYHA (P53392) High affinity sulphate transporter 2 | 28 | 7.8 |
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>YPJA_BACSU (P54392) Hypothetical protein ypjA| Length = 185 Score = 30.0 bits (66), Expect = 1.6 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -3 Query: 224 FVVLAFHLVKA-QGISINYSIWLCVSRFSRWNPTVVAASFLFNAVKQFLVDLEPHYFLIS 48 ++++A H A QG+ YS + RFS W+ + A L N V +L D+ P Y ++S Sbjct: 95 YMLIASHFAMAVQGVL--YSPYF---RFSFWHLAIAAVWTLHNDVIDYLFDMMPQYSMLS 149
>T2R46_PAPHA (Q646G0) Taste receptor type 2 member 46 (T2R46)| Length = 309 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 215 LAFHLVKAQGISINYSIWLCVSRFSRWNPTVVAASFL 105 LAFH V+ + S Y++W+ + FS W T ++ +L Sbjct: 73 LAFHSVEVR--STAYNVWVVTNHFSNWLSTSLSMFYL 107
>REP1_ZYGBA (P13776) Trans-acting factor B (REP1)| Length = 357 Score = 28.1 bits (61), Expect = 6.0 Identities = 13/56 (23%), Positives = 29/56 (51%) Frame = +2 Query: 77 QPKIVLLR*TRMMLQQQWDSNEKTDLHIAIYYN*SKSLVLSPDGKPKQQIGQPKNS 244 +P +V+ T+ + +N+ D+++ N S + P+ K +++GQPK + Sbjct: 83 EPYVVVNTITKRFQDHKLFANKNADVYVERLQNAIASGIKIPESKKNERLGQPKKT 138
>SUT1_STYHA (P53391) High affinity sulphate transporter 1| Length = 667 Score = 28.1 bits (61), Expect = 6.0 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 197 KAQGISINYSIWLCVSRFSRWNPTVVAASFL-FNAVKQFLVDLEPHYFLISSLTSIVHAI 21 K IS+ S+W V W ++ SFL F + +++ F +S+++ ++ I Sbjct: 249 KTDIISVMRSVWTHVHHGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMISVI 308 Query: 20 I 18 + Sbjct: 309 V 309
>SUT2_STYHA (P53392) High affinity sulphate transporter 2| Length = 662 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = -3 Query: 185 ISINYSIWLCVSRFSRWNPTVVAASFL-FNAVKQFLVDLEPHYFLISSLTSIVHAII 18 +S+ +S+W V W ++ SFL F + +++ F +S+++ ++ I+ Sbjct: 248 VSVMHSVWSNVHHGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMICVIV 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,711,835 Number of Sequences: 219361 Number of extensions: 608240 Number of successful extensions: 1444 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1435 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1444 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)