ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) ... 28 4.8
2VA5_VESPE (P35785) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ... 28 4.8
3VA5_VESMC (P35760) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ... 28 4.8
4VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ... 28 4.8
5VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ... 28 4.8
6PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Ch... 28 8.3
7CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel al... 28 8.3

>VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) (Allergen Ves|
           v 5) (Ves v V)
          Length = 227

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236
           HN F++   RG+  RGNPG     KN K
Sbjct: 71  HNDFRQKIARGLETRGNPGPQPPAKNMK 98



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>VA5_VESPE (P35785) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves p 5) (Ves|
           p V)
          Length = 204

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236
           HN F++   RG+  RGNPG     KN K
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKNMK 75



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>VA5_VESMC (P35760) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves m 5) (Ves|
           m V)
          Length = 204

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236
           HN F++   RG+  RGNPG     KN K
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKNMK 75



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>VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves g 5) (Ves|
           g V)
          Length = 204

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236
           HN F++   RG+  RGNPG     KN K
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKNMK 75



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>VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves f 5) (Ves|
           f V)
          Length = 204

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236
           HN F++   RG+  RGNPG     KN K
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKNMK 75



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>PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride|
           peroxidase) (CPO-L) (Chloroperoxidase L)
          Length = 275

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 173 WPLEGVMLVSPLHYRLVAPCSRRERPDVLPRWYVPGKFSSSHDVDDNV 30
           W L+G+M  +  HY  +A  S  +  D L R  VP     +H  DD V
Sbjct: 183 WWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP--VLVAHGTDDQV 228



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>CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel alpha-1F subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1985

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 46   SWDEENLPGTYQRGRTSGLS 105
            S ++  +PGTY RGRTSG S
Sbjct: 1821 SCEDLPIPGTYHRGRTSGPS 1840


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,283,652
Number of Sequences: 219361
Number of extensions: 790294
Number of successful extensions: 2160
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2160
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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