Clone Name | rbastl24e03 |
---|---|
Clone Library Name | barley_pub |
>VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) (Allergen Ves| v 5) (Ves v V) Length = 227 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236 HN F++ RG+ RGNPG KN K Sbjct: 71 HNDFRQKIARGLETRGNPGPQPPAKNMK 98
>VA5_VESPE (P35785) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves p 5) (Ves| p V) Length = 204 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236 HN F++ RG+ RGNPG KN K Sbjct: 48 HNDFRQKIARGLETRGNPGPQPPAKNMK 75
>VA5_VESMC (P35760) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves m 5) (Ves| m V) Length = 204 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236 HN F++ RG+ RGNPG KN K Sbjct: 48 HNDFRQKIARGLETRGNPGPQPPAKNMK 75
>VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves g 5) (Ves| g V) Length = 204 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236 HN F++ RG+ RGNPG KN K Sbjct: 48 HNDFRQKIARGLETRGNPGPQPPAKNMK 75
>VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves f 5) (Ves| f V) Length = 204 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 HNAFKRPGERGVGNRGNPGMTLTTKNNK 236 HN F++ RG+ RGNPG KN K Sbjct: 48 HNDFRQKIARGLETRGNPGPQPPAKNMK 75
>PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride| peroxidase) (CPO-L) (Chloroperoxidase L) Length = 275 Score = 27.7 bits (60), Expect = 8.3 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -1 Query: 173 WPLEGVMLVSPLHYRLVAPCSRRERPDVLPRWYVPGKFSSSHDVDDNV 30 W L+G+M + HY +A S + D L R VP +H DD V Sbjct: 183 WWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP--VLVAHGTDDQV 228
>CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel alpha-1F subunit| (Voltage-gated calcium channel alpha subunit Cav1.4) Length = 1985 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 46 SWDEENLPGTYQRGRTSGLS 105 S ++ +PGTY RGRTSG S Sbjct: 1821 SCEDLPIPGTYHRGRTSGPS 1840 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,283,652 Number of Sequences: 219361 Number of extensions: 790294 Number of successful extensions: 2160 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2160 length of database: 80,573,946 effective HSP length: 55 effective length of database: 68,509,091 effective search space used: 1644218184 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)