Clone Name | rbastl24e01 |
---|---|
Clone Library Name | barley_pub |
>AMDM_SCHPO (P50998) AMP deaminase (EC 3.5.4.6) (Myoadenylate deaminase)| Length = 846 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +2 Query: 59 VDQPSIPELPLAYQLTLTTERETHKTEATSQPKVHPKTMEL*HVLEEISKMHGTGE 226 +D+ ++P + LAY+ LT +E QP HP +L ++ + M GT + Sbjct: 738 IDRTNVPIIRLAYR-ALTLTQEIALVNKHVQPSKHPSNHDLEELIHKYDAMTGTSD 792
>ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7| Length = 920 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = +3 Query: 246 AESIPEPPPLLCAKDLSKRSLSPSKGFFFIARFVLDSDSAPAGHPQGKIHPNTQAL 413 AE P PPP+ D+ L+ K + L S APAGH +P T L Sbjct: 772 AEFTPGPPPISYQSDIPSSLLTSEK-----STACLPSQMAPAGHLDPTHNPGTPGL 822
>YGJ3_YEAST (P53148) Hypothetical 104.8 kDa protein in PAN2-NUP145 intergenic| region Length = 917 Score = 29.6 bits (65), Expect = 3.2 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%) Frame = +3 Query: 78 LSFHLHTSSPLXXXXXXXXXXXXASQKFTLKRWNYSMSLKKYLKCMALGKYSRTEEAESI 257 +S+HL T L ++ F +K+W + K LK + K ++TEE E+ Sbjct: 781 MSYHLFTML-LKNVEAEHQDSMLSNLFFAMKKWRPLLKYIKLLKLLFPVKITQTEEEEA- 838 Query: 258 PEPPPLLCAKDLSKRSLSPSKGFFFIARFVLDSDS--APAGHPQGKIHPNTQ 407 LL KD +R+ FF++ V + + G K+H +TQ Sbjct: 839 -----LLQFKDYDRRN---KTAFFYVISLVSFAQGVFSENGQIPMKVHISTQ 882
>ATS8_HUMAN (Q9UP79) ADAMTS-8 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 8) (ADAM-TS 8) (ADAM-TS8) (METH-2) (METH-8) Length = 890 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 231 SRTEEAESIPEPPPLLCAKDLSKRSLSPSK 320 S+ EEAE EPPP L A +KR +S ++ Sbjct: 191 SQEEEAEGASEPPPPLGATSRTKRFVSEAR 220
>SIGL5_HUMAN (O15389) Sialic acid-binding Ig-like lectin 5 precursor (Siglec-5)| (Obesity-binding protein 2) (OB-binding protein 2) (OB-BP2) (CD33 antigen-like 2) (CD170 antigen) Length = 551 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +2 Query: 47 WTAPVDQPSIPELPLAYQLTLTTERETHKTEATSQPK 157 WT P PE + +LTLT E H T T Q K Sbjct: 180 WTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMK 216
>NUCB1_HUMAN (Q02818) Nucleobindin-1 precursor (CALNUC)| Length = 461 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%) Frame = +3 Query: 363 APAGHPQG--KIHPNTQALRIAAP 428 APA HP+G K HP+T + + AP Sbjct: 411 APAAHPEGQLKFHPDTDDVPVPAP 434 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,405,295 Number of Sequences: 219361 Number of extensions: 1313640 Number of successful extensions: 4031 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3915 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4030 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)