>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 19/32 (59%), Positives = 27/32 (84%)
 Frame = -1

Query: 274  GKNGLAQGQGSDASRVKEAMELATQIASMKLS 179
            GK GLA GQG+DAS+V+ A+++A+  ASMKL+
Sbjct: 972  GKGGLASGQGTDASQVQAALDMASSFASMKLN 1003

>SYA_THETN (Q8RAH4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 878

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -1

Query: 274 GKNGLAQGQGSDASRVKEAMELATQIASMKL 182
           G+  +AQG G + S+VKEA+E A +I   +L
Sbjct: 846 GRAEMAQGTGKNISKVKEALEKAIEIVKGQL 876

>K0286_MOUSE (Q6ZQE4) Protein KIAA0286|
          Length = 437

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -3

Query: 266 WSCPGPGK*CFSGQGGNGACYPDSFDEAELIC*DWSSYILSGCLMVVLTLLSQIVMREHK 87
           WS  GPG  C+   GG GA               W   +++GC++     ++ ++++E +
Sbjct: 10  WSAVGPGPRCWGAGGGGGA--------------TWLLLVVAGCVVCGSADVNVVMLQESQ 55

Query: 86  I 84
           +
Sbjct: 56  V 56

>SYA_PSEAE (Q9I553) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 874

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 274 GKNGLAQGQGSDASRVKEAMELATQIASMKLS*FVETGL 158
           G+  +AQG G+DA+++ EA+ LA +        FVE GL
Sbjct: 844 GRPDMAQGGGTDAAKLDEALALAQR--------FVEQGL 874

>KHSE_BACSU (P04948) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 309

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -1

Query: 262 LAQGQGSDASRVKEAMELATQIASMKLS 179
           LA+G GS A+ +  A+ELA ++  +KLS
Sbjct: 92  LARGLGSSAAAIVAAIELADELCGLKLS 119

>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +2

Query: 137  SSHLICMKTSLN-KSAQLHRSYLGSKLHCLLDPRSITSLALGK 262
            S H  C+ T LN +  + H  Y+G  L CL +        LG+
Sbjct: 2145 SEHANCLSTGLNTRRCECHAGYVGDGLQCLEESEPPVDRCLGQ 2187

>HYIN1_AGRVI (Q04557) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH)|
           (Indole-3-acetamide hydrolase)
          Length = 462

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 159 RPVSTNQLSFIEAIWVASSIASLTREASLP 248
           R ++TNQ++F+EA     ++A LTR+ SLP
Sbjct: 265 RRLATNQMTFVEA--DIPNVAELTRKVSLP 292

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -3

Query: 161 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTL 42
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTV 423

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -3

Query: 161 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTL 42
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTV 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,381,203
Number of Sequences: 219361
Number of extensions: 695884
Number of successful extensions: 1358
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)