ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL603845.11| Mouse DNA sequence from clone RP23-145C12 on ch... 46 0.036
2gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 0.57
3gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, com... 42 0.57
4ref|XM_567902.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 0.57
5emb|AL590628.6| Human DNA sequence from clone RP11-252O7 on chro... 42 0.57
6gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, com... 42 0.57
7ref|NM_206896.1| Mus musculus olfactory receptor 12 (Olfr12), mRNA 40 2.2
8gb|AC126600.6| Mus musculus chromosome 1, clone RP23-145J9, comp... 40 2.2
9gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome... 40 2.2
10gb|AY318626.1| Mus musculus olfactory receptor Olfr12 (Olfr12) g... 40 2.2
11gb|AC126027.4| Mus musculus BAC clone RP24-490F3 from chromosome... 40 2.2
12gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome... 40 2.2
13gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, comple... 40 2.2
14ref|XM_504075.1| Yarrowia lipolytica CLIB122, YALI0E17743g predi... 40 2.2
15emb|AL034426.5|HS580G13 Human DNA sequence from clone RP4-580G13... 40 2.2
16emb|AL662921.10| Mouse DNA sequence from clone RP23-397K10 on ch... 40 2.2
17gb|AY074230.1| Mus musculus olfactory receptor MOR208-5 pseudoge... 40 2.2
18emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on ch... 40 2.2
19gb|AC153987.4| Mus musculus 6 BAC RP24-430K15 (Roswell Park Canc... 40 2.2
20emb|AL928855.7| Mouse DNA sequence from clone RP23-452C10 on chr... 40 2.2
21emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 2.2
22emb|AJ272270.1|HCO272270 Haemonchus contortus mRNA for 110-R orp... 40 2.2
23gb|AY732159.1| Hepatitis C virus isolate 00CHNHN38M from China p... 38 8.8
24gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 38 8.8
25gb|AC105948.9| Mus musculus chromosome 8, clone RP24-96N12, comp... 38 8.8
26gb|AY751301.1| Octopus dofleini hemocyanin A-type (HA) gene, exo... 38 8.8
27gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome ... 38 8.8
28gb|AC102446.8| Mus musculus chromosome 5, clone RP24-201G17, com... 38 8.8
29gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, com... 38 8.8
30gb|AY557819.1| Saccharomyces cerevisiae clone FLH003039.01X YGR1... 38 8.8
31gb|AC113022.7| Mus musculus chromosome 5, clone RP23-187D22, com... 38 8.8
32gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome... 38 8.8
33gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete se... 38 8.8
34gb|AC130275.16| Medicago truncatula clone mth1-63a17, complete s... 38 8.8
35emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 i... 38 8.8
36emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on ch... 38 8.8
37emb|X85807.1|SCCVIIRA S.cerevisiae chromosome VII 27kbp right ar... 38 8.8
38emb|BX571659.1| Wolinella succinogenes, complete genome; segment... 38 8.8
39emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on ch... 38 8.8
40gb|AF031686.1| Albinaria moreletiana isolate mor.Plk1.1 16S ribo... 38 8.8
41emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in... 38 8.8
42emb|BX546482.15| Zebrafish DNA sequence from clone DKEY-226B20 i... 38 8.8
43gb|AC025039.7| Homo sapiens chromosome 10 clone RP11-457M15, com... 38 8.8
44dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 38 8.8
45gb|AC018508.9| Homo sapiens chromosome 10 clone RP11-123L21, com... 38 8.8
46gb|AC107878.2| Homo sapiens chromosome 18, clone RP11-138C8, com... 38 8.8
47gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, compl... 38 8.8
48gb|AC093309.2| Homo sapiens chromosome 5 clone RP11-97P23, compl... 38 8.8
49gb|AC092272.2| Homo sapiens chromosome 5 clone CTC-339E17, compl... 38 8.8
50gb|DP000031.1| Dasypus novemcinctus target 116 genomic scaffold 38 8.8
51ref|NM_058998.3| Caenorhabditis elegans Ribosomal Protein, Large... 38 8.8
52dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
53gb|AC079121.5| Homo sapiens BAC clone RP11-368O9 from 2, complet... 38 8.8
54gb|AC008844.5|AC008844 Homo sapiens chromosome 5 clone CTD-2157L... 38 8.8
55dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
56emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in... 38 8.8
57gb|AC153858.3| Mus musculus 10 BAC RP23-139H21 (Roswell Park Can... 38 8.8
58emb|Z72933.1|SCYGR148C S.cerevisiae chromosome VII reading frame... 38 8.8
59gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, co... 38 8.8
60gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, comple... 38 8.8
61gb|AC131184.4| Mus musculus BAC clone RP23-347G20 from 3, comple... 38 8.8
62dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 8.8
63emb|AL929232.3| Mouse DNA sequence from clone RP23-294G12 on chr... 38 8.8
64gb|M34387.1|YSCL30RP S.cerevisiae ribosomal protein L30 (RPL30B)... 38 8.8 
>emb|AL603845.11| Mouse DNA sequence from clone RP23-145C12 on chromosome 11 Contains a
             ribosomal protein L7a (Rpl7a) pseudogene and the 3' end of
             the gene for a novel protein similar to Tensin Tns,
             complete sequence
          Length = 223491

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 116   aaaatataagtaaatcttaataa 138
             |||||||||||||||||||||||
Sbjct: 80680 aaaatataagtaaatcttaataa 80702
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     agccaacaaggaaaagaagga 87
              |||||||||||||||||||||
Sbjct: 913165 agccaacaaggaaaagaagga 913145
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>gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, complete sequence
          Length = 190372

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 114    gtaaaatataagtaaatcttaataa 138
              |||||||||| ||||||||||||||
Sbjct: 140480 gtaaaatatatgtaaatcttaataa 140504
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>ref|XM_567902.1| Cryptococcus neoformans var. neoformans JEC21 helicase (CNK03090)
           partial mRNA
          Length = 3015

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 67  agccaacaaggaaaagaagga 87
           |||||||||||||||||||||
Sbjct: 476 agccaacaaggaaaagaagga 496
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>emb|AL590628.6| Human DNA sequence from clone RP11-252O7 on chromosome 10 Contains the
             3' end of the ADD3 gene for adducin 3 (gamma) and a small
             nuclear ribonucleoprotein polypeptide G (SNRPG)
             pseudogene, complete sequence
          Length = 113797

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   tataagtaaatcttaataatt 140
             |||||||||||||||||||||
Sbjct: 61508 tataagtaaatcttaataatt 61488
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>gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, complete sequence
          Length = 179163

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 114   gtaaaatataagtaaatctta 134
             |||||||||||||||||||||
Sbjct: 50323 gtaaaatataagtaaatctta 50303
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>ref|NM_206896.1| Mus musculus olfactory receptor 12 (Olfr12), mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  tagccaacaaggaaaagaag 85
           ||||||||||||||||||||
Sbjct: 346 tagccaacaaggaaaagaag 327
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>gb|AC126600.6| Mus musculus chromosome 1, clone RP23-145J9, complete sequence
          Length = 219130

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     tagccaacaaggaaaagaag 85
              ||||||||||||||||||||
Sbjct: 154437 tagccaacaaggaaaagaag 154456
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>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence
          Length = 199679

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 115    taaaatataagtaaatcttaataa 138
              |||||||||| |||||||||||||
Sbjct: 174850 taaaatataaataaatcttaataa 174873
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>gb|AY318626.1| Mus musculus olfactory receptor Olfr12 (Olfr12) gene, complete cds
          Length = 1002

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  tagccaacaaggaaaagaag 85
           ||||||||||||||||||||
Sbjct: 346 tagccaacaaggaaaagaag 327
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>gb|AC126027.4| Mus musculus BAC clone RP24-490F3 from chromosome 18, complete sequence
          Length = 172078

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    aaaatataagtaaatcttaa 135
              ||||||||||||||||||||
Sbjct: 163428 aaaatataagtaaatcttaa 163409
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>gb|AC127322.4| Mus musculus BAC clone RP23-238A8 from chromosome 6, complete sequence
          Length = 179698

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 115    taaaatataagtaaatcttaataa 138
              |||||||||| |||||||||||||
Sbjct: 177195 taaaatataaataaatcttaataa 177172
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>gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, complete sequence
          Length = 177969

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    aaaatataagtaaatcttaa 135
              ||||||||||||||||||||
Sbjct: 161709 aaaatataagtaaatcttaa 161728
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>ref|XM_504075.1| Yarrowia lipolytica CLIB122, YALI0E17743g predicted mRNA
          Length = 2502

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  ccaacaaggaaaagaaggac 88
           ||||||||||||||||||||
Sbjct: 659 ccaacaaggaaaagaaggac 678
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>emb|AL034426.5|HS580G13 Human DNA sequence from clone RP4-580G13 on chromosome 20p11.2-11.21
             Contains a GAPD (glyceraldehyde-3-phosphate dehydrogenase)
             pseudogene, the 5' end of the C20orf39 gene for chromosome
             20 open reading frame 39 and a CpG island, complete
             sequence
          Length = 148642

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   taaatcttaataattaatag 145
             ||||||||||||||||||||
Sbjct: 15105 taaatcttaataattaatag 15086
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>emb|AL662921.10| Mouse DNA sequence from clone RP23-397K10 on chromosome 11 Contains a
             CpG island, complete sequence
          Length = 141754

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   taaaatataagtaaatcttaataa 138
             ||||||| ||||||||||||||||
Sbjct: 60626 taaaataaaagtaaatcttaataa 60603
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>gb|AY074230.1| Mus musculus olfactory receptor MOR208-5 pseudogene, partial
           sequence
          Length = 957

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  tagccaacaaggaaaagaag 85
           ||||||||||||||||||||
Sbjct: 346 tagccaacaaggaaaagaag 327
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>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete
              sequence
          Length = 195733

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    ataagtaaatcttaataatt 140
              ||||||||||||||||||||
Sbjct: 100650 ataagtaaatcttaataatt 100631
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>gb|AC153987.4| Mus musculus 6 BAC RP24-430K15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 133371

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    caatgccatagccaacaagg 77
             ||||||||||||||||||||
Sbjct: 63281 caatgccatagccaacaagg 63300
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>emb|AL928855.7| Mouse DNA sequence from clone RP23-452C10 on chromosome 2, complete
             sequence
          Length = 196567

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   gtaaaatataagtaaatctt 133
             ||||||||||||||||||||
Sbjct: 86198 gtaaaatataagtaaatctt 86217
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 69      ccaacaaggaaaagaaggac 88
               ||||||||||||||||||||
Sbjct: 2094053 ccaacaaggaaaagaaggac 2094072
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>emb|AJ272270.1|HCO272270 Haemonchus contortus mRNA for 110-R orphan receptor
          Length = 3523

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   gccatagccaacaaggaaaa 81
            ||||||||||||||||||||
Sbjct: 2028 gccatagccaacaaggaaaa 2009
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>gb|AY732159.1| Hepatitis C virus isolate 00CHNHN38M from China polyprotein gene,
           partial cds
          Length = 530

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  gaaaagaaggacgcaaatc 95
           |||||||||||||||||||
Sbjct: 224 gaaaagaaggacgcaaatc 206
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 9       caaaaagtactcaaccagt 27
               |||||||||||||||||||
Sbjct: 1663980 caaaaagtactcaaccagt 1663998
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>gb|AC105948.9| Mus musculus chromosome 8, clone RP24-96N12, complete sequence
          Length = 143798

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 144   agggaatggcacagttaga 162
             |||||||||||||||||||
Sbjct: 41676 agggaatggcacagttaga 41658
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>gb|AY751301.1| Octopus dofleini hemocyanin A-type (HA) gene, exons a through f2 and
            partial cds
          Length = 13245

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 112  gcgtaaaatataagtaaat 130
            |||||||||||||||||||
Sbjct: 9519 gcgtaaaatataagtaaat 9501
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>gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome 6, complete sequence
          Length = 218138

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 115    taaaatataagtaaatctt 133
              |||||||||||||||||||
Sbjct: 177904 taaaatataagtaaatctt 177922
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>gb|AC102446.8| Mus musculus chromosome 5, clone RP24-201G17, complete sequence
          Length = 176748

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   gcattgcgtaaaatataag 125
             |||||||||||||||||||
Sbjct: 32090 gcattgcgtaaaatataag 32072
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>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence
          Length = 197683

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 140    taatagggaatggcacagt 158
              |||||||||||||||||||
Sbjct: 145525 taatagggaatggcacagt 145543
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>gb|AY557819.1| Saccharomyces cerevisiae clone FLH003039.01X YGR148C gene, complete
           cds
          Length = 468

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  agccaacaaggaaaagaag 85
           |||||||||||||||||||
Sbjct: 330 agccaacaaggaaaagaag 348
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>gb|AC113022.7| Mus musculus chromosome 5, clone RP23-187D22, complete sequence
          Length = 210968

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   gcattgcgtaaaatataag 125
             |||||||||||||||||||
Sbjct: 40319 gcattgcgtaaaatataag 40337
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>gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome 6, complete sequence
          Length = 185160

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   taaaatataagtaaatctt 133
             |||||||||||||||||||
Sbjct: 84875 taaaatataagtaaatctt 84893
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>gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete sequence
          Length = 118017

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 117   aaatataagtaaatcttaataattaat 143
             |||||||| ||||| ||||||||||||
Sbjct: 33874 aaatataattaaatattaataattaat 33900
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>gb|AC130275.16| Medicago truncatula clone mth1-63a17, complete sequence
          Length = 90599

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 117   aaatataagtaaatcttaa 135
             |||||||||||||||||||
Sbjct: 50050 aaatataagtaaatcttaa 50068
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>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13,
              complete sequence
          Length = 206656

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     caacaaggaaaagaaggac 88
              |||||||||||||||||||
Sbjct: 146516 caacaaggaaaagaaggac 146534
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>emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 198959

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     cccaacataagtgggctca 59
              |||||||||||||||||||
Sbjct: 116492 cccaacataagtgggctca 116474
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>emb|X85807.1|SCCVIIRA S.cerevisiae chromosome VII 27kbp right arm segment
          Length = 26677

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 67   agccaacaaggaaaagaag 85
            |||||||||||||||||||
Sbjct: 6441 agccaacaaggaaaagaag 6423
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>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7
          Length = 349970

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 124    agtaaatcttaataattaa 142
              |||||||||||||||||||
Sbjct: 221742 agtaaatcttaataattaa 221724
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>emb|AL596181.10| Mouse DNA sequence from clone RP23-234K24 on chromosome 11 Contains nine
              novel genes, the Trpv2 for member 2 transient receptor
              potential cation channel subfamily V, the Ubb gene for
              ubiquitin B, the 3' end of the gene for the ortholog of
              human and rat phosphatidylinositol glycan class L PIGL and
              five CpG islands, complete sequence
          Length = 195339

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 117    aaatataagtaaatcttaa 135
              |||||||||||||||||||
Sbjct: 104380 aaatataagtaaatcttaa 104362
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>gb|AF031686.1| Albinaria moreletiana isolate mor.Plk1.1 16S ribosomal RNA gene,
           mitochondrial gene for mitochondrial RNA, partial
           sequence
          Length = 386

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 aaaatataagtaaatctta 134
           |||||||||||||||||||
Sbjct: 201 aaaatataagtaaatctta 219
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>emb|BX323820.4| Zebrafish DNA sequence from clone CH211-251K4 in linkage group 4
             Contains the gene for a novel protein similar to
             vertebrate calcium channel voltage-dependent alpha 2/delta
             subunit 1 (CACNA2D1) and a CpG island, complete sequence
          Length = 172228

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 117   aaatataagtaaatcttaataattaat 143
             |||||||| ||||| ||||||||||||
Sbjct: 64839 aaatataaataaatattaataattaat 64813
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>emb|BX546482.15| Zebrafish DNA sequence from clone DKEY-226B20 in linkage group 13,
              complete sequence
          Length = 206949

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     caacaaggaaaagaaggac 88
              |||||||||||||||||||
Sbjct: 183143 caacaaggaaaagaaggac 183125
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>gb|AC025039.7| Homo sapiens chromosome 10 clone RP11-457M15, complete sequence
          Length = 172790

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 117   aaatataagtaaatcttaa 135
             |||||||||||||||||||
Sbjct: 46007 aaatataagtaaatcttaa 46025
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 64      catagccaacaaggaaaagaagg 86
               ||||||||||||| |||||||||
Sbjct: 1772939 catagccaacaagaaaaagaagg 1772917
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>gb|AC018508.9| Homo sapiens chromosome 10 clone RP11-123L21, complete sequence
          Length = 149901

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 117   aaatataagtaaatcttaa 135
             |||||||||||||||||||
Sbjct: 30023 aaatataagtaaatcttaa 30005
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>gb|AC107878.2| Homo sapiens chromosome 18, clone RP11-138C8, complete sequence
          Length = 182375

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    aataattaatagggaatgg 152
              |||||||||||||||||||
Sbjct: 112569 aataattaatagggaatgg 112551
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>gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, complete sequence
          Length = 177954

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 129   atcttaataattaataggg 147
             |||||||||||||||||||
Sbjct: 29234 atcttaataattaataggg 29252
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>gb|AC093309.2| Homo sapiens chromosome 5 clone RP11-97P23, complete sequence
          Length = 169422

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    aaatcttaataattaatag 145
              |||||||||||||||||||
Sbjct: 120756 aaatcttaataattaatag 120738
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>gb|AC092272.2| Homo sapiens chromosome 5 clone CTC-339E17, complete sequence
          Length = 145668

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 129    atcttaataattaataggg 147
              |||||||||||||||||||
Sbjct: 136516 atcttaataattaataggg 136534
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>gb|DP000031.1| Dasypus novemcinctus target 116 genomic scaffold
          Length = 288075

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 118    aatataagtaaatcttaataattaata 144
              |||||||| |||| |||||||||||||
Sbjct: 112928 aatataagaaaatattaataattaata 112902
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>ref|NM_058998.3| Caenorhabditis elegans Ribosomal Protein, Large subunit family
           member (rpl-24.1) (rpl-24.1) mRNA, complete cds
          Length = 551

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 68  gccaacaaggaaaagaagg 86
           |||||||||||||||||||
Sbjct: 411 gccaacaaggaaaagaagg 429
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 74       aaggaaaagaaggacgcaa 92
                |||||||||||||||||||
Sbjct: 23217293 aaggaaaagaaggacgcaa 23217311
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>gb|AC079121.5| Homo sapiens BAC clone RP11-368O9 from 2, complete sequence
          Length = 79228

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 133   taataattaatagggaatg 151
             |||||||||||||||||||
Sbjct: 18268 taataattaatagggaatg 18250
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>gb|AC008844.5|AC008844 Homo sapiens chromosome 5 clone CTD-2157L4, complete sequence
          Length = 113759

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 129   atcttaataattaataggg 147
             |||||||||||||||||||
Sbjct: 38134 atcttaataattaataggg 38152
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>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    aaggaaaagaaggacgcaa 92
             |||||||||||||||||||
Sbjct: 52055 aaggaaaagaaggacgcaa 52073
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>emb|CR846099.7| Zebrafish DNA sequence from clone DKEY-182M23 in linkage group 12,
             complete sequence
          Length = 140422

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 122   taagtaaatcttaataattaata 144
             ||||||||| |||||||||||||
Sbjct: 89930 taagtaaattttaataattaata 89908
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>gb|AC153858.3| Mus musculus 10 BAC RP23-139H21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198030

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    aaatataagtaaatcttaa 135
              |||||||||||||||||||
Sbjct: 129016 aaatataagtaaatcttaa 129034
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>emb|Z72933.1|SCYGR148C S.cerevisiae chromosome VII reading frame ORF YGR148c
          Length = 2110

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 67  agccaacaaggaaaagaag 85
           |||||||||||||||||||
Sbjct: 530 agccaacaaggaaaagaag 512
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>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence
          Length = 168482

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 121   ataagtaaatcttaataat 139
             |||||||||||||||||||
Sbjct: 64641 ataagtaaatcttaataat 64623
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>gb|AC145731.4| Mus musculus BAC clone RP24-499N24 from 9, complete sequence
          Length = 211847

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    taatagggaatggcacagt 158
              |||||||||||||||||||
Sbjct: 209787 taatagggaatggcacagt 209769
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>gb|AC131184.4| Mus musculus BAC clone RP23-347G20 from 3, complete sequence
          Length = 203243

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    tagggaatggcacagttag 161
              |||||||||||||||||||
Sbjct: 139168 tagggaatggcacagttag 139186
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>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b,
             complete sequence
          Length = 38490

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 119   atataagtaaatcttaataatta 141
             ||||||||||||||| |||||||
Sbjct: 35318 atataagtaaatcttgataatta 35340
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>emb|AL929232.3| Mouse DNA sequence from clone RP23-294G12 on chromosome 2, complete
            sequence
          Length = 76864

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 132  ttaataattaatagggaat 150
            |||||||||||||||||||
Sbjct: 3500 ttaataattaatagggaat 3482
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>gb|M34387.1|YSCL30RP S.cerevisiae ribosomal protein L30 (RPL30B) gene, exon 1
          Length = 1596

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 67   agccaacaaggaaaagaag 85
            |||||||||||||||||||
Sbjct: 1193 agccaacaaggaaaagaag 1211


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,999,423
Number of Sequences: 3902068
Number of extensions: 1999423
Number of successful extensions: 150475
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150218
Number of HSP's gapped (non-prelim): 257
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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