ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl24c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 254 1e-64
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 60 4e-06
3gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 48 0.016
4gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.062
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.062
6ref|XM_471832.1| Oryza sativa (japonica cultivar-group), predic... 44 0.25
7gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, compl... 44 0.25
8emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4,... 44 0.25
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.25
10dbj|AK121570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.25
11gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, comp... 44 0.25
12ref|NM_122199.1| Arabidopsis thaliana unknown protein AT5G22930 ... 42 0.97
13ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 ... 42 0.97
14gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.97
15emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, comple... 42 0.97
16emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 42 0.97
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
19gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, comple... 42 0.97
20dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
21gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II sectio... 42 0.97
22dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 0.97
23dbj|AK072298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
24gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.97
25ref|NM_125445.1| Arabidopsis thaliana unknown protein AT5G60520 ... 40 3.8
26ref|NM_120799.1| Arabidopsis thaliana unknown protein AT5G07170 ... 40 3.8
27gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, com... 40 3.8
28gb|BC076955.1| Xenopus tropicalis MGC89374 protein, mRNA (cDNA c... 40 3.8
29gb|AY693277.1| Saccharomyces cerevisiae clone FLH114745.01X YPR1... 40 3.8
30gb|AY693234.1| Saccharomyces cerevisiae clone FLH158351.01X YPR1... 40 3.8
31gb|BT011223.1| Arabidopsis thaliana 40 3.8
32gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 geno... 40 3.8
33gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 40 3.8
34gb|U40829.1|YSCP9659 Saccharomyces cerevisiae chromosome XVI cos... 40 3.8
35ref|XM_779982.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.8
36emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4,... 40 3.8
37emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4,... 40 3.8
38emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, B... 40 3.8
39gb|AF287229.1| Tetrahymena pyriformis heat shock protein 90 (HSP... 40 3.8
40dbj|AK164419.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 3.8
41gb|AF435813.1| Human calicivirus SLV/Mex14917/2000 capsid protei... 40 3.8
42ref|NM_001005061.1| Xenopus tropicalis MGC89374 protein (MGC8937... 40 3.8
43gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14... 40 3.8
44dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 3.8
45gb|AF194182.1|AF194182 Human calicivirus strain Hu/SLV/Stockholm... 40 3.8
46gb|AF151114.1|AF151114 Tetrahymena thermophila strain B2086 hsp8... 40 3.8
47dbj|AP004925.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 3.8
48gb|U30384.1|SCU30384 Saccharomyces cerevisiae Scd6p (SCD6) gene,... 40 3.8
49emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chr... 40 3.8 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  254 bits (128), Expect = 1e-64
 Identities = 144/149 (96%), Gaps = 4/149 (2%)
 Strand = Plus / Minus

                                                                        
Query: 150  ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 2837

                                                                        
Query: 210  agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcaccc----ttattgc 265
            |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||
Sbjct: 2836 agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattgc 2777

                                         
Query: 266  cttaattattcatgcgccggcacaactct 294
            ||||||||||||||| |||||||||||||
Sbjct: 2776 cttaattattcatgcaccggcacaactct 2748
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence
          Length = 1129

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 143  catcgacttcattattgggcaaaacaagggattttttctgcacacgacga 192
            ||||||||| |||||||||||||  |||||| |||||||| |||||||||
Sbjct: 1099 catcgactttattattgggcaaatgaagggaatttttctgtacacgacga 1050



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 225  ccgcatgccgatcagacccgtcgtgcacgcac-ccttattgcctta 269
            ||||||||||||| |||||||||||||| ||| | |||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcacacacgcattattgcctta 1000
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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence,
             complete sequence
          Length = 140064

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 33    agaaacagaggaaacagaggagct 56
             ||||||||||||||||||||||||
Sbjct: 33747 agaaacagaggaaacagaggagct 33770
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>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 257    ccttattgccttaattattcatg 279
              |||||||||||||||||||||||
Sbjct: 136193 ccttattgccttaattattcatg 136215



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 257   ccttattgccttaattattcatg 279
             |||||||||||||||||||||||
Sbjct: 94214 ccttattgccttaattattcatg 94236
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 257      ccttattgccttaattattcatg 279
                |||||||||||||||||||||||
Sbjct: 21745017 ccttattgccttaattattcatg 21745039



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 257      ccttattgccttaattattcatg 279
                |||||||||||||||||||||||
Sbjct: 21703038 ccttattgccttaattattcatg 21703060
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>ref|XM_471832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3171

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 32   cagaaacagaggaaacagagga 53
            ||||||||||||||||||||||
Sbjct: 2834 cagaaacagaggaaacagagga 2855
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>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence
          Length = 232817

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 36    aacagaggaaacagaggagcttgcaa 61
             ||||||||||||||||||| ||||||
Sbjct: 33676 aacagaggaaacagaggagattgcaa 33651
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>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02,
             complete sequence
          Length = 166747

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 32    cagaaacagaggaaacagagga 53
             ||||||||||||||||||||||
Sbjct: 12155 cagaaacagaggaaacagagga 12176
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 32       cagaaacagaggaaacagagga 53
                ||||||||||||||||||||||
Sbjct: 14855417 cagaaacagaggaaacagagga 14855438



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 35       aaacagaggaaacagaggag 54
                ||||||||||||||||||||
Sbjct: 15061869 aaacagaggaaacagaggag 15061850



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 35       aaacagaggaaacagaggag 54
                ||||||||||||||||||||
Sbjct: 14325080 aaacagaggaaacagaggag 14325099
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>dbj|AK121570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035J21, full
            insert sequence
          Length = 3743

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 32   cagaaacagaggaaacagagga 53
            ||||||||||||||||||||||
Sbjct: 3064 cagaaacagaggaaacagagga 3085
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>gb|AC124443.3| Mus musculus chromosome 18 clone RP24-178K3, complete sequence
          Length = 169326

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 36    aacagaggaaacagaggagcttgcaa 61
             ||||||||||||||||||| ||||||
Sbjct: 36220 aacagaggaaacagaggagattgcaa 36245
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>ref|NM_122199.1| Arabidopsis thaliana unknown protein AT5G22930 mRNA, complete cds
          Length = 747

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 33 agaaacagaggaaacagagga 53
          |||||||||||||||||||||
Sbjct: 46 agaaacagaggaaacagagga 26
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>ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 mRNA, complete cds
          Length = 2550

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 33  agaaacagaggaaacagagga 53
           |||||||||||||||||||||
Sbjct: 261 agaaacagaggaaacagagga 281
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>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18
              map near E10005S, complete sequence
          Length = 140920

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 33     agaaacagaggaaacagagga 53
              |||||||||||||||||||||
Sbjct: 113479 agaaacagaggaaacagagga 113499
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>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence
          Length = 37711

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   aaacaagggattttttctgca 184
             |||||||||||||||||||||
Sbjct: 32565 aaacaagggattttttctgca 32585
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>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 161   gcaaaacaagggattttttct 181
             |||||||||||||||||||||
Sbjct: 39634 gcaaaacaagggattttttct 39614
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 33       agaaacagaggaaacagagga 53
                |||||||||||||||||||||
Sbjct: 13755670 agaaacagaggaaacagagga 13755690
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 96       ttgccaagaagaagaaaaaca 116
                |||||||||||||||||||||
Sbjct: 35171480 ttgccaagaagaagaaaaaca 35171500
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>gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, complete sequence
          Length = 111000

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 94    gtttgccaagaagaagaaaaa 114
             |||||||||||||||||||||
Sbjct: 26186 gtttgccaagaagaagaaaaa 26206
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>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    ttgccaagaagaagaaaaaca 116
             |||||||||||||||||||||
Sbjct: 50564 ttgccaagaagaagaaaaaca 50584
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>gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II section 98 of 255 of the complete
             sequence. Sequence from clones F12A24, F6P23
          Length = 90952

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    agaaacagaggaaacagagga 53
             |||||||||||||||||||||
Sbjct: 15994 agaaacagaggaaacagagga 15974
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>dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17
          Length = 86065

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    agaaacagaggaaacagagga 53
             |||||||||||||||||||||
Sbjct: 63414 agaaacagaggaaacagagga 63434
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>dbj|AK072298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016M03, full
            insert sequence
          Length = 3490

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   agaaacagaggaaacagagga 53
            |||||||||||||||||||||
Sbjct: 2232 agaaacagaggaaacagagga 2252
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 33       agaaacagaggaaacagagga 53
                |||||||||||||||||||||
Sbjct: 13837668 agaaacagaggaaacagagga 13837688
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>ref|NM_125445.1| Arabidopsis thaliana unknown protein AT5G60520 mRNA, complete cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 32 cagaaacagaggaaacagag 51
          ||||||||||||||||||||
Sbjct: 55 cagaaacagaggaaacagag 36
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>ref|NM_120799.1| Arabidopsis thaliana unknown protein AT5G07170 mRNA, complete cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  cagaaacagaggaaacagag 51
           ||||||||||||||||||||
Sbjct: 623 cagaaacagaggaaacagag 642
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>gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, complete sequence
          Length = 240081

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     acagaggaaacagaggagct 56
              ||||||||||||||||||||
Sbjct: 122557 acagaggaaacagaggagct 122538
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>gb|BC076955.1| Xenopus tropicalis MGC89374 protein, mRNA (cDNA clone MGC:89374
            IMAGE:6988658), complete cds
          Length = 3668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   ggaaacagaggagcttgcaa 61
            ||||||||||||||||||||
Sbjct: 3127 ggaaacagaggagcttgcaa 3146
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>gb|AY693277.1| Saccharomyces cerevisiae clone FLH114745.01X YPR130C gene, complete
           cds
          Length = 408

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  gaaacagaggaaacagagga 53
           ||||||||||||||||||||
Sbjct: 200 gaaacagaggaaacagagga 181
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>gb|AY693234.1| Saccharomyces cerevisiae clone FLH158351.01X YPR129W gene, complete
           cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gaaacagaggaaacagagga 53
           ||||||||||||||||||||
Sbjct: 896 gaaacagaggaaacagagga 915
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>gb|BT011223.1| Arabidopsis thaliana
          Length = 1232

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  cagaaacagaggaaacagag 51
           ||||||||||||||||||||
Sbjct: 153 cagaaacagaggaaacagag 134
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>gb|AC007504.3| Arabidopsis thaliana chromosome I BAC F13F21 genomic sequence,
           complete sequence
          Length = 125021

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  aaacagaggaaacagaggag 54
           ||||||||||||||||||||
Sbjct: 968 aaacagaggaaacagaggag 987
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete
             sequence
          Length = 196646

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tatttgggcaacttgagctt 27
             ||||||||||||||||||||
Sbjct: 59357 tatttgggcaacttgagctt 59376
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>gb|U40829.1|YSCP9659 Saccharomyces cerevisiae chromosome XVI cosmid 9659
          Length = 43281

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   gaaacagaggaaacagagga 53
            ||||||||||||||||||||
Sbjct: 2537 gaaacagaggaaacagagga 2556
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>ref|XM_779982.1| PREDICTED: Strongylocentrotus purpuratus similar to periostin
            (LOC579890), mRNA
          Length = 1542

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 127  ggagggaacatcacaccatc 146
            ||||||||||||||||||||
Sbjct: 1457 ggagggaacatcacaccatc 1438
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>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14,
             complete sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aaacagaggaaacagaggag 54
             ||||||||||||||||||||
Sbjct: 78330 aaacagaggaaacagaggag 78311
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>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01,
             complete sequence
          Length = 166906

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aaacagaggaaacagaggag 54
             ||||||||||||||||||||
Sbjct: 58000 aaacagaggaaacagaggag 58019
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>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project)
          Length = 104607

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cagaaacagaggaaacagag 51
             ||||||||||||||||||||
Sbjct: 27228 cagaaacagaggaaacagag 27247
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>gb|AF287229.1| Tetrahymena pyriformis heat shock protein 90 (HSP81) gene, partial
           cds
          Length = 2283

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  ccaagaagaagaaaaacaac 118
           ||||||||||||||||||||
Sbjct: 979 ccaagaagaagaaaaacaac 998
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>dbj|AK164419.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230016I11 product:unclassifiable, full
            insert sequence
          Length = 3499

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   acagaggaaacagaggagct 56
            ||||||||||||||||||||
Sbjct: 1712 acagaggaaacagaggagct 1693
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>gb|AF435813.1| Human calicivirus SLV/Mex14917/2000 capsid protein and minor
            structural protein genes, complete cds; and unknown gene
          Length = 2272

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ttgagcttgacccagaaaca 39
            ||||||||||||||||||||
Sbjct: 1592 ttgagcttgacccagaaaca 1611
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>ref|NM_001005061.1| Xenopus tropicalis MGC89374 protein (MGC89374), mRNA
          Length = 3668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   ggaaacagaggagcttgcaa 61
            ||||||||||||||||||||
Sbjct: 3127 ggaaacagaggagcttgcaa 3146
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>gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14J22 genomic sequence, complete
             sequence
          Length = 104679

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aaacagaggaaacagaggag 54
             ||||||||||||||||||||
Sbjct: 93915 aaacagaggaaacagaggag 93934
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>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9
          Length = 77298

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cagaaacagaggaaacagag 51
             ||||||||||||||||||||
Sbjct: 53393 cagaaacagaggaaacagag 53412
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>gb|AF194182.1|AF194182 Human calicivirus strain Hu/SLV/Stockholm/318/97/SE capsid protein
            gene, partial cds
          Length = 1695

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ttgagcttgacccagaaaca 39
            ||||||||||||||||||||
Sbjct: 1589 ttgagcttgacccagaaaca 1608
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>gb|AF151114.1|AF151114 Tetrahymena thermophila strain B2086 hsp82 heat shock protein
           (HSP82) mRNA, partial cds
          Length = 2243

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  ccaagaagaagaaaaacaac 118
           ||||||||||||||||||||
Sbjct: 974 ccaagaagaagaaaaacaac 993
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>dbj|AP004925.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079b,
             complete sequence
          Length = 33290

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gaaacagaggaaacagagga 53
             ||||||||||||||||||||
Sbjct: 18765 gaaacagaggaaacagagga 18784
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>gb|U30384.1|SCU30384 Saccharomyces cerevisiae Scd6p (SCD6) gene, complete cds
          Length = 2006

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   gaaacagaggaaacagagga 53
            ||||||||||||||||||||
Sbjct: 1436 gaaacagaggaaacagagga 1455
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>emb|AL732475.6| Mouse DNA sequence from clone RP23-202H24 on chromosome X, complete
             sequence
          Length = 165720

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    agaggaaacagaggagcttg 58
             ||||||||||||||||||||
Sbjct: 11891 agaggaaacagaggagcttg 11910


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,600,972
Number of Sequences: 3902068
Number of extensions: 3600972
Number of successful extensions: 94873
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94668
Number of HSP's gapped (non-prelim): 204
length of query: 294
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 272
effective length of database: 17,147,199,772
effective search space: 4664038337984
effective search space used: 4664038337984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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