>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 325     attgctgcagcggctcgacatgg 347
               |||||||||||||||||||||||
Sbjct: 1734472 attgctgcagcggctcgacatgg 1734494

>emb|CR450771.10| Zebrafish DNA sequence from clone CH211-152D1 in linkage group 2,
              complete sequence
          Length = 152893

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     attttgctgaatgtgtagcat 58
              |||||||||||||||||||||
Sbjct: 123325 attttgctgaatgtgtagcat 123345

>emb|AL353713.7| Human DNA sequence from clone RP5-1090O5 on chromosome 1 Contains GSSs,
             complete sequence
          Length = 82654

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 77    gtatacacaataaagaatcaagtcc 101
             ||||| |||||||||||||||||||
Sbjct: 51062 gtataaacaataaagaatcaagtcc 51086

>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence
          Length = 161014

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 241   cattgatgtggatgaaatggt 261
             |||||||||||||||||||||
Sbjct: 97929 cattgatgtggatgaaatggt 97949

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    atgtacatacaaaaactgcac 210
              |||||||||||||||||||||
Sbjct: 620969 atgtacatacaaaaactgcac 620949

>gb|AC168276.3| Mus musculus  BAC RP24-485I12 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 186675

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   ggaagaaactgaagaagccggcag 171
             |||||||| |||||||||||||||
Sbjct: 37722 ggaagaaagtgaagaagccggcag 37699

>ref|XM_653866.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1354.2), mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   aagaatcaagtccgaggtat 108
            ||||||||||||||||||||
Sbjct: 1275 aagaatcaagtccgaggtat 1256

>gb|AY211007.1| Hyaloperonospora parasitica specimen-voucher SMK 18859 18S ribosomal
            RNA gene, partial sequence; internal transcribed spacer
            1, 5.8S ribosomal RNA gene, and internal transcribed
            spacer 2, complete sequence
          Length = 1197

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  accgctacaacggaagaaac 156
            ||||||||||||||||||||
Sbjct: 1053 accgctacaacggaagaaac 1034

>gb|AY211006.1| Hyaloperonospora parasitica specimen-voucher SMK 18834 18S ribosomal
            RNA gene, partial sequence; internal transcribed spacer
            1, 5.8S ribosomal RNA gene, and internal transcribed
            spacer 2, complete sequence
          Length = 1200

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  accgctacaacggaagaaac 156
            ||||||||||||||||||||
Sbjct: 1056 accgctacaacggaagaaac 1037

>gb|AY211005.1| Hyaloperonospora parasitica specimen-voucher SMK 12789 18S ribosomal
            RNA gene, partial sequence; internal transcribed spacer
            1, 5.8S ribosomal RNA gene, and internal transcribed
            spacer 2, complete sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  accgctacaacggaagaaac 156
            ||||||||||||||||||||
Sbjct: 1055 accgctacaacggaagaaac 1036

>gb|AY211004.1| Hyaloperonospora parasitica specimen-voucher SMK 18713 18S ribosomal
            RNA gene, partial sequence; internal transcribed spacer
            1, 5.8S ribosomal RNA gene, and internal transcribed
            spacer 2, complete sequence
          Length = 1198

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  accgctacaacggaagaaac 156
            ||||||||||||||||||||
Sbjct: 1054 accgctacaacggaagaaac 1035

>gb|AY211003.1| Hyaloperonospora parasitica specimen-voucher SMK 11409 18S ribosomal
            RNA gene, partial sequence; internal transcribed spacer
            1, 5.8S ribosomal RNA gene, and internal transcribed
            spacer 2, complete sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  accgctacaacggaagaaac 156
            ||||||||||||||||||||
Sbjct: 1055 accgctacaacggaagaaac 1036

>ref|XM_388397.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08221.1)
            partial mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  ggaagaaactgaagaagccg 167
            ||||||||||||||||||||
Sbjct: 1492 ggaagaaactgaagaagccg 1473

>gb|AC153892.12| Mus musculus 10 BAC RP23-113O12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197426

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    ggaagaaactgaagaagccggcag 171
              |||||||| |||||||||||||||
Sbjct: 185822 ggaagaaagtgaagaagccggcag 185799

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     tgctgcagcggctcgacatg 346
               ||||||||||||||||||||
Sbjct: 4987303 tgctgcagcggctcgacatg 4987322

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    aacggaagaaactgaagaagccgg 168
              |||||||||||| |||||||||||
Sbjct: 266421 aacggaagaaacggaagaagccgg 266444

>gb|AY531396.1| Peronospora barbareae strain MG 20-10 internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 786

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 accgctacaacggaagaaac 156
           ||||||||||||||||||||
Sbjct: 642 accgctacaacggaagaaac 623

>gb|AY531395.1| Peronospora barbareae strain MG 13-6 internal transcribed spacer 1,
           partial sequence; 5.8S ribosomal RNA gene, complete
           sequence; and internal transcribed spacer 2, partial
           sequence
          Length = 791

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 accgctacaacggaagaaac 156
           ||||||||||||||||||||
Sbjct: 647 accgctacaacggaagaaac 628

>gb|AY531394.1| Peronospora rorippae-islandicae strain MG 20-1 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene,
           complete sequence; and internal transcribed spacer 2,
           partial sequence
          Length = 785

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 accgctacaacggaagaaac 156
           ||||||||||||||||||||
Sbjct: 641 accgctacaacggaagaaac 622

>gb|AY531393.1| Peronospora rorippae-islandicae strain MG 20-2 internal transcribed
           spacer 1, partial sequence; 5.8S ribosomal RNA gene,
           complete sequence; and internal transcribed spacer 2,
           partial sequence
          Length = 783

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 accgctacaacggaagaaac 156
           ||||||||||||||||||||
Sbjct: 639 accgctacaacggaagaaac 620

>emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on chromosome X, complete
             sequence
          Length = 205023

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 300   accaatgatgctttacaaactgca 323
             ||||||||||||||||||| ||||
Sbjct: 89129 accaatgatgctttacaaaatgca 89106


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,491,857
Number of Sequences: 3902068
Number of extensions: 3491857
Number of successful extensions: 80417
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80348
Number of HSP's gapped (non-prelim): 69
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)